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Peter C. Anderson, Ph.D. - Publications

Affiliations: 
2007 University of Wisconsin, Madison, Madison, WI 
Area:
studies of non-covalent interactions and the application of the resulting findings to biochemical and biomedical problems
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9 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Chong AS, Anderson PC. Molecular dynamics simulations of the hypoxia-inducible factor PAS-B domain confirm that internally bound water molecules function to stabilize the protein core for ligand binding. Biochemistry. PMID 31868344 DOI: 10.1021/Acs.Biochem.9B00872  0.323
2018 Collins AP, Anderson P. Complete coupled binding-folding pathway of the intrinsically disordered transcription factor protein Brinker revealed by molecular dynamics simulations and Markov state modeling. Biochemistry. PMID 29990433 DOI: 10.1021/Acs.Biochem.8B00441  0.392
2017 Warfield BM, Anderson PC. Molecular simulations and Markov state modeling reveal the structural diversity and dynamics of a theophylline-binding RNA aptamer in its unbound state. Plos One. 12: e0176229. PMID 28437473 DOI: 10.1371/Journal.Pone.0176229  0.467
2012 Anderson PC, De Sapio V, Turner KB, Elmer SP, Roe DC, Schoeniger JS. Identification of binding specificity-determining features in protein families. Journal of Medicinal Chemistry. 55: 1926-39. PMID 22289061 DOI: 10.1021/Jm200979X  0.373
2009 Key J, Scheuermann TH, Anderson PC, Daggett V, Gardner KH. Principles of ligand binding within a completely buried cavity in HIF2α PAS-B Journal of the American Chemical Society. 131: 17647-17654. PMID 19950993 DOI: 10.1021/Ja9073062  0.415
2007 Anderson PC, Mecozzi S. Minimum sequence requirements for the binding of paromomycin to the rRNA decoding site A. Biopolymers. 86: 95-111. PMID 17323326 DOI: 10.1002/Bip.20707  0.682
2006 Anderson PC, Mecozzi S. Minimum sequence requirements for selective RNA-ligand binding: a molecular mechanics algorithm using molecular dynamics and free-energy techniques. Journal of Computational Chemistry. 27: 1631-40. PMID 16900493 DOI: 10.1002/Jcc.20459  0.666
2005 Anderson PC, Mecozzi S. Identification of a 14mer RNA that recognizes and binds flavin mononucleotide with high affinity. Nucleic Acids Research. 33: 6992-9. PMID 16377778 DOI: 10.1093/Nar/Gki992  0.667
2005 Anderson PC, Mecozzi S. Unusually short RNA sequences: design of a 13-mer RNA that selectively binds and recognizes theophylline. Journal of the American Chemical Society. 127: 5290-1. PMID 15826145 DOI: 10.1021/Ja0432463  0.669
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