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James A. Wohlschlegel, Ph.D. - Publications

Affiliations: 
2002 Harvard University, Cambridge, MA, United States 
Area:
Biochemistry
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Year Citation  Score
2023 Zemke NR, Hsu E, Barshop WD, Sha J, Wohlschlegel JA, Berk AJ. Adenovirus E1A binding to DCAF10 targets proteasomal degradation of RUVBL1/2 AAA+ ATPases required for quaternary assembly of multiprotein machines, innate immunity, and responses to metabolic stress. Journal of Virology. e0099323. PMID 37962355 DOI: 10.1128/jvi.00993-23  0.719
2022 Fan X, Barshop WD, Vashisht AA, Pandey V, Leal S, Rayatpisheh S, Jami-Alahmadi Y, Sha J, Wohlschlegel JA. Iron-Regulated Assembly of the Cytosolic Iron-Sulfur Cluster Biogenesis Machinery. The Journal of Biological Chemistry. 102094. PMID 35654137 DOI: 10.1016/j.jbc.2022.102094  0.7
2022 Shen JZ, Qiu Z, Wu Q, Zhang G, Harris R, Sun D, Rantala J, Barshop WD, Zhao L, Lv D, Won KA, Wohlschlegel J, Sangfelt O, Laman H, Rich JN, et al. A FBXO7/EYA2-SCF axis promotes AXL-mediated maintenance of mesenchymal and immune evasion phenotypes of cancer cells. Molecular Cell. PMID 35182481 DOI: 10.1016/j.molcel.2022.01.022  0.694
2021 Clifford BL, Sedgeman LR, Williams KJ, Morand P, Cheng A, Jarrett KE, Chan AP, Brearley-Sholto MC, Wahlström A, Ashby JW, Barshop W, Wohlschlegel J, Calkin AC, Liu Y, Thorell A, et al. FXR activation protects against NAFLD via bile-acid-dependent reductions in lipid absorption. Cell Metabolism. PMID 34270928 DOI: 10.1016/j.cmet.2021.06.012  0.66
2020 Shen JZ, Qiu Z, Wu Q, Finlay D, Garcia G, Sun D, Rantala J, Barshop W, Hope JL, Gimple RC, Sangfelt O, Bradley LM, Wohlschlegel J, Rich JN, Spruck C. FBXO44 promotes DNA replication-coupled repetitive element silencing in cancer cells. Cell. PMID 33357448 DOI: 10.1016/j.cell.2020.11.042  0.706
2020 Wang Y, Zhong Z, Zhang Y, Xu L, Feng S, Rayatpisheh S, Wohlschlegel JA, Wang Z, Jacobsen SE, Ausin I. NAP1-RELATED PROTEIN1 and 2 negatively regulate H2A.Z abundance in chromatin in Arabidopsis. Nature Communications. 11: 2887. PMID 32513971 DOI: 10.1038/S41467-020-16691-X  0.328
2020 Liu Q, Bischof S, Harris CJ, Zhong Z, Zhan L, Nguyen C, Rashoff A, Barshop WD, Sun F, Feng S, Potok M, Gallego-Bartolome J, Zhai J, Wohlschlegel JA, Carey MF, et al. The characterization of Mediator 12 and 13 as conditional positive gene regulators in Arabidopsis. Nature Communications. 11: 2798. PMID 32493925 DOI: 10.1038/S41467-020-16651-5  0.721
2020 Back PS, O'Shaughnessy WJ, Moon AS, Dewangan PS, Hu X, Sha J, Wohlschlegel JA, Bradley PJ, Reese ML. Ancient MAPK ERK7 is regulated by an unusual inhibitory scaffold required for apical complex biogenesis. Proceedings of the National Academy of Sciences of the United States of America. PMID 32409604 DOI: 10.1073/Pnas.1921245117  0.373
2020 Nadipuram SM, Thind AC, Rayatpisheh S, Wohlschlegel JA, Bradley PJ. Proximity biotinylation reveals novel secreted dense granule proteins of Toxoplasma gondii bradyzoites. Plos One. 15: e0232552. PMID 32374791 DOI: 10.1371/Journal.Pone.0232552  0.347
2020 Lewis A, Berkyurek AC, Greiner A, Sawh AN, Vashisht A, Merrett S, Flamand MN, Wohlschlegel J, Sarov M, Miska EA, Duchaine TF. A Family of Argonaute-Interacting Proteins Gates Nuclear RNAi. Molecular Cell. PMID 32348780 DOI: 10.1016/J.Molcel.2020.04.007  0.336
2020 Nicolau M, Picault N, Descombin J, Jami-Alahmadi Y, Feng S, Bucher E, Jacobsen SE, Deragon JM, Wohlschlegel J, Moissiard G. The plant mobile domain proteins MAIN and MAIL1 interact with the phosphatase PP7L to regulate gene expression and silence transposable elements in Arabidopsis thaliana. Plos Genetics. 16: e1008324. PMID 32287271 DOI: 10.1371/Journal.Pgen.1008324  0.402
2020 Nessel T, Beck JM, Rayatpisheh S, Jami-Alahmadi Y, Wohlschlegel JA, Goldberg DE, Beck JR. EXP1 is required for organization of EXP2 in the intraerythrocytic malaria parasite vacuole. Cellular Microbiology. PMID 31990132 DOI: 10.1111/Cmi.13168  0.319
2020 Grolla AA, Miggiano R, Di Marino D, Bianchi M, Gori A, Orsomando G, Gaudino F, Galli U, Del Grosso E, Mazzola F, Angeletti C, Guarneri M, Torretta S, Calabrò M, Boumya S, ... ... Wohlschlegel JA, et al. A nicotinamide phosphoribosyltransferase-GAPDH interaction sustains the stress-induced NMN/NAD salvage pathway in the nucleus. The Journal of Biological Chemistry. PMID 31988240 DOI: 10.1074/Jbc.Ra119.010571  0.341
2020 Bradley PJ, Rayatpisheh S, Wohlschlegel JA, Nadipuram SM. Using BioID for the Identification of Interacting and Proximal Proteins in Subcellular Compartments in Toxoplasma gondii. Methods in Molecular Biology (Clifton, N.J.). 2071: 323-346. PMID 31758461 DOI: 10.1007/978-1-4939-9857-9_18  0.35
2020 Brunner A, Johansson H, Kourtesakis A, Rantala J, Spruck C, Wohlschlegel J, Lehtiö J, Sangfelt O. Abstract 2371: FBXL12 modulates Fanconi anaemia-BRCA signaling under conditions of oncogene-induced replication stress Cancer Research. 80: 2371-2371. DOI: 10.1158/1538-7445.Am2020-2371  0.355
2019 Ho CM, Li X, Lai M, Terwilliger TC, Beck JR, Wohlschlegel J, Goldberg DE, Fitzpatrick AWP, Zhou ZH. Bottom-up structural proteomics: cryoEM of protein complexes enriched from the cellular milieu. Nature Methods. PMID 31768063 DOI: 10.2210/Pdb6Pev/Pdb  0.331
2019 Choi CP, Moon AS, Back PS, Jami-Alahmadi Y, Vashisht AA, Wohlschlegel JA, Bradley PJ. A photoactivatable crosslinking system reveals protein interactions in the Toxoplasma gondii inner membrane complex. Plos Biology. 17: e3000475. PMID 31584943 DOI: 10.1371/Journal.Pbio.3000475  0.362
2019 Barshop WD, Kim HJ, Fan X, Sha J, Rayatpisheh S, Wohlschlegel JA. Chemical Derivatization of Affinity Matrices Provides Protection from Tryptic Proteolysis. Journal of Proteome Research. PMID 31498634 DOI: 10.1021/Acs.Jproteome.9B00254  0.702
2019 Wongpalee SP, Liu S, Gallego-Bartolomé J, Leitner A, Aebersold R, Liu W, Yen L, Nohales MA, Kuo PH, Vashisht AA, Wohlschlegel JA, Feng S, Kay SA, Zhou ZH, Jacobsen SE. CryoEM structures of Arabidopsis DDR complexes involved in RNA-directed DNA methylation. Nature Communications. 10: 3916. PMID 31477705 DOI: 10.1038/S41467-019-11759-9  0.338
2019 Potok ME, Wang Y, Xu L, Zhong Z, Liu W, Feng S, Naranbaatar B, Rayatpisheh S, Wang Z, Wohlschlegel JA, Ausin I, Jacobsen SE. Arabidopsis SWR1-associated protein methyl-CpG-binding domain 9 is required for histone H2A.Z deposition. Nature Communications. 10: 3352. PMID 31350403 DOI: 10.1038/S41467-019-11291-W  0.352
2019 Mayank AK, Pandey V, Vashisht AA, Barshop WD, Rayatpisheh S, Sharma T, Haque T, Powers DN, Wohlschlegel JA. An Oxygen-Dependent Interaction between FBXL5 and the CIA-Targeting Complex Regulates Iron Homeostasis. Molecular Cell. PMID 31229404 DOI: 10.1016/J.Molcel.2019.05.020  0.722
2019 Barshop WD, Rayatpisheh S, Kim HJ, Wohlschlegel JA. Sequential Windowed Acquisition of Reporter Masses for Quantitation-First Proteomics. Journal of Proteome Research. PMID 30781952 DOI: 10.1021/Acs.Jproteome.8B00884  0.706
2018 Quintero D, Carrafa J, Vincent L, Lee HJ, Wohlschlegel J, Bermudes D. Co-Expression of a Chimeric Protease Inhibitor Secreted by a Tumor-Targeted Protects Therapeutic Proteins from Proteolytic Degradation. Journal of Microbiology and Biotechnology. 28: 2079-2094. PMID 30661346 DOI: 10.4014/Jmb.1807.08036  0.315
2018 Harris CJ, Scheibe M, Wongpalee SP, Liu W, Cornett EM, Vaughan RM, Li X, Chen W, Xue Y, Zhong Z, Yen L, Barshop WD, Rayatpisheh S, Gallego-Bartolome J, Groth M, ... ... Wohlschlegel JA, et al. A DNA methylation reader complex that enhances gene transcription. Science (New York, N.Y.). 362: 1182-1186. PMID 30523112 DOI: 10.1126/Science.Aar7854  0.735
2018 Quintero D, Carrafa J, Vincent L, Kim HJ, Wohlschlegel J, Bermudes D. Co-expression of a Chimeric Protease Inhibitor Secreted by a Tumor-targeted Protects Therapeutic Proteins from Proteolytic Degradation. Journal of Microbiology and Biotechnology. PMID 30380826 DOI: 10.4014/Jmb.1808.08036  0.313
2018 Lao JP, Ulrich KM, Johnson JR, Newton BW, Vashisht AA, Wohlschlegel JA, Krogan NJ, Toczyski DP. The Yeast DNA Damage Checkpoint Kinase Rad53 Targets the Exoribonuclease, Xrn1. G3 (Bethesda, Md.). PMID 30377154 DOI: 10.1534/G3.118.200767  0.388
2018 Romero AM, Martínez-Pastor M, Du G, Solé C, Carlos M, Vergara SV, Sanvisens N, Wohlschlegel JA, Toczyski DP, Posas F, de Nadal E, Martínez-Pastor MT, Thiele DJ, Puig S. Phosphorylation and Proteasome Recognition of the mRNA-Binding Protein Cth2 Facilitates Yeast Adaptation to Iron Deficiency. Mbio. 9. PMID 30228242 DOI: 10.1128/Mbio.01694-18  0.326
2018 Benador IY, Veliova M, Mahdaviani K, Petcherski A, Wikstrom JD, Assali EA, Acín-Pérez R, Shum M, Oliveira MF, Cinti S, Sztalryd C, Barshop WD, Wohlschlegel JA, Corkey BE, Liesa M, et al. Mitochondria Bound to Lipid Droplets Have Unique Bioenergetics, Composition, and Dynamics that Support Lipid Droplet Expansion. Cell Metabolism. 27: 869-885.e6. PMID 29617645 DOI: 10.1016/J.Cmet.2018.03.003  0.696
2018 Nievas YR, Vashisht AA, Corvi MM, Metz S, Johnson PJ, Wohlschlegel JA, de Miguel N. Protein palmitoylation plays an important role inadherence. Molecular & Cellular Proteomics : McP. PMID 29444981 DOI: 10.1074/Mcp.Ra117.000018  0.336
2017 Freire ER, Moura DMN, Bezerra MJR, Xavier CC, Morais-Sobral MC, Vashisht AA, Rezende AM, Wohlschlegel JA, Sturm NR, de Melo Neto OP, Campbell DA. Trypanosoma brucei EIF4E2 cap-binding protein binds a homolog of the histone-mRNA stem-loop-binding protein. Current Genetics. PMID 29288414 DOI: 10.1007/S00294-017-0795-3  0.361
2017 Nievas YR, Coceres VM, Midlej V, de Souza W, Benchimol M, Pereira-Neves A, Vashisht AA, Wohlschlegel JA, Johnson PJ, de Miguel N. Membrane-shed vesicles from the parasite Trichomonas vaginalis: characterization and their association with cell interaction. Cellular and Molecular Life Sciences : Cmls. PMID 29222644 DOI: 10.1007/S00018-017-2726-3  0.312
2017 Rengasamy M, Zhang F, Vashisht A, Song WM, Aguilo F, Sun Y, Li S, Zhang W, Zhang B, Wohlschlegel JA, Walsh MJ. The PRMT5/WDR77 complex regulates alternative splicing through ZNF326 in breast cancer. Nucleic Acids Research. PMID 28977470 DOI: 10.1093/Nar/Gkx727  0.359
2017 Zhang Z, Ren P, Vashisht AA, Wohlschlegel JA, Quintana DG, Zeng F. Cdk1-interacting protein Cip1 is regulated by the S phase checkpoint in response to genotoxic stress. Genes to Cells : Devoted to Molecular & Cellular Mechanisms. PMID 28771906 DOI: 10.1111/Gtc.12518  0.348
2017 Xue Y, Pradhan SK, Sun F, Chronis C, Tran N, Su T, Van C, Vashisht A, Wohlschlegel J, Peterson CL, Timmers HTM, Kurdistani SK, Carey MF. Mot1, Ino80C, and NC2 Function Coordinately to Regulate Pervasive Transcription in Yeast and Mammals. Molecular Cell. PMID 28735899 DOI: 10.1016/J.Molcel.2017.06.029  0.383
2017 Mota CM, Chen AL, Wang K, Nadipuram S, Vashisht AA, Wohlschlegel JA, Mineo TWP, Bradley PJ. New molecular tools in Neospora caninum for studying apicomplexan parasite proteins. Scientific Reports. 7: 3768. PMID 28630403 DOI: 10.1038/S41598-017-03978-1  0.327
2017 Liu Q, Wang Q, Deng W, Wang X, Piao M, Cai D, Li Y, Barshop WD, Yu X, Zhou T, Liu B, Oka Y, Wohlschlegel J, Zuo Z, Lin C. Molecular basis for blue light-dependent phosphorylation of Arabidopsis cryptochrome 2. Nature Communications. 8: 15234. PMID 28492234 DOI: 10.1038/Ncomms15234  0.721
2017 Li D, Palanca AMS, Won SY, Gao L, Feng Y, Vashisht AA, Liu L, Zhao Y, Liu X, Wu X, Li S, Le B, Kim YJ, Yang G, Li S, ... ... Wohlschlegel JA, et al. The MBD7 complex promotes expression of methylated transgenes without significantly altering their methylation status. Elife. 6. PMID 28452714 DOI: 10.7554/Elife.19893  0.337
2017 Kerins MJ, Vashisht A, Liang BX, Duckworth SJ, Praslicka BJ, Wohlschlegel JA, Ooi A. Fumarate mediates a chronic proliferative signal in fumarate hydratase inactivated cancer cells by increasing transcription and translation of ferritin genes. Molecular and Cellular Biology. PMID 28289076 DOI: 10.1128/Mcb.00079-17  0.376
2017 Huang C, Su T, Xue Y, Cheng C, Lay FD, McKee RA, Li M, Vashisht A, Wohlschlegel J, Novitch BG, Plath K, Kurdistani SK, Carey M. Cbx3 maintains lineage specificity during neural differentiation. Genes & Development. 31: 241-246. PMID 28270516 DOI: 10.1101/Gad.292169.116  0.315
2017 Wu E, Vashisht AA, Chapat C, Flamand MN, Cohen E, Sarov M, Tabach Y, Sonenberg N, Wohlschlegel J, Duchaine TF. A continuum of mRNP complexes in embryonic microRNA-mediated silencing. Nucleic Acids Research. 45: 2081-2098. PMID 28204614 DOI: 10.1093/Nar/Gkw872  0.314
2017 Wang Q, Barshop WD, Bian M, Vashisht AA, He R, Yu X, Liu B, Nguyen P, Liu X, Zhao X, Wohlschlegel JA, Lin C. The Blue Light-Dependent Phosphorylation of the CCE Domain Determines the Photosensitivity of Arabidopsis CRY2. Molecular Plant. 10: 357. PMID 28196586 DOI: 10.1016/j.molp.2016.12.009  0.679
2016 Wongpalee SP, Vashisht A, Sharma S, Chui D, Wohlschlegel JA, Black DL. Large-scale remodeling of a repressed exon ribonucleoprotein to an exon definition complex active for splicing. Elife. 5. PMID 27882870 DOI: 10.7554/Elife.19743  0.36
2016 Nitarska J, Smith JG, Sherlock WT, Hillege MM, Nott A, Barshop WD, Vashisht AA, Wohlschlegel JA, Mitter R, Riccio A. A Functional Switch of NuRD Chromatin Remodeling Complex Subunits Regulates Mouse Cortical Development. Cell Reports. 17: 1683-1698. PMID 27806305 DOI: 10.1016/J.Celrep.2016.10.022  0.724
2016 Caslavka Zempel KE, Vashisht AA, Barshop WD, Wohlschlegel JA, Clarke SG. Determining the Mitochondrial Methyl Proteome in Saccharomyces cerevisiae using Heavy Methyl SILAC. Journal of Proteome Research. PMID 27696855 DOI: 10.1021/Acs.Jproteome.6B00521  0.708
2016 Chen AL, Moon AS, Bell HN, Huang AS, Vashisht AA, Toh JY, Lin AH, Nadipuram SM, Kim EW, Choi CP, Wohlschlegel JA, Bradley PJ. Novel insights into the composition and function of the Toxoplasma IMC sutures. Cellular Microbiology. PMID 27696623 DOI: 10.1111/Cmi.12678  0.327
2016 Mota CM, Oliveira AC, Davoli-Ferreira M, Silva MV, Santiago FM, Nadipuram SM, Vashisht AA, Wohlschlegel JA, Bradley PJ, Silva JS, Mineo JR, Mineo TW. Neospora caninum Activates p38 MAPK as an Evasion Mechanism against Innate Immunity. Frontiers in Microbiology. 7: 1456. PMID 27679624 DOI: 10.3389/Fmicb.2016.01456  0.323
2016 Piel RB, Shiferaw MT, Vashisht AA, Marcero JR, Praissman JL, Phillips JD, Wohlschlegel JA, Medlock AE. A Novel Role for Progesterone Receptor Membrane Component 1 (PGRMC1): A Partner and Regulator of Ferrochelatase. Biochemistry. PMID 27599036 DOI: 10.1021/Acs.Biochem.6B00756  0.342
2016 Drake JM, Paull EO, Graham NA, Lee JK, Smith BA, Titz B, Stoyanova T, Faltermeier CM, Uzunangelov V, Carlin DE, Fleming DT, Wong CK, Newton Y, Sudha S, Vashisht AA, ... ... Wohlschlegel JA, et al. Phosphoproteome Integration Reveals Patient-Specific Networks in Prostate Cancer. Cell. PMID 27499020 DOI: 10.1016/J.Cell.2016.07.007  0.301
2016 Nadipuram SM, Kim EW, Vashisht AA, Lin AH, Bell HN, Coppens I, Wohlschlegel JA, Bradley PJ. In Vivo Biotinylation of the Toxoplasma Parasitophorous Vacuole Reveals Novel Dense Granule Proteins Important for Parasite Growth and Pathogenesis. Mbio. 7. PMID 27486190 DOI: 10.1128/Mbio.00808-16  0.361
2016 Kim EW, Nadipuram SM, Tetlow AL, Barshop WD, Liu PT, Wohlschlegel JA, Bradley PJ. The Rhoptry Pseudokinase ROP54 Modulates Toxoplasma gondii Virulence and Host GBP2 Loading. Msphere. 1. PMID 27303719 DOI: 10.1128/mSphere.00045-16  0.695
2016 Li F, Bullough KZ, Vashisht AA, Wohlschlegel JA, Philpott CC. Poly(rC)-binding Protein 2 regulates Hippo signaling to control growth in breast epithelial cells. Molecular and Cellular Biology. PMID 27215387 DOI: 10.1128/Mcb.00104-16  0.397
2016 Harris CJ, Husmann D, Liu W, Kasmi FE, Wang H, Papikian A, Pastor WA, Moissiard G, Vashisht AA, Dangl JL, Wohlschlegel JA, Jacobsen SE. Arabidopsis AtMORC4 and AtMORC7 Form Nuclear Bodies and Repress a Large Number of Protein-Coding Genes. Plos Genetics. 12: e1005998. PMID 27171361 DOI: 10.1371/Journal.Pgen.1005998  0.397
2016 Damianov A, Ying Y, Lin CH, Lee JA, Tran D, Vashisht AA, Bahrami-Samani E, Xing Y, Martin KC, Wohlschlegel JA, Black DL. Rbfox Proteins Regulate Splicing as Part of a Large Multiprotein Complex LASR. Cell. 165: 606-619. PMID 27104978 DOI: 10.1016/J.Cell.2016.03.040  0.372
2016 Aguilo F, Li S, Balasubramaniyan N, Sancho A, Benko S, Zhang F, Vashisht A, Rengasamy M, Andino B, Chen CH, Zhou F, Qian C, Zhou MM, Wohlschlegel JA, Zhang W, et al. Deposition of 5-Methylcytosine on Enhancer RNAs Enables the Coactivator Function of PGC-1α. Cell Reports. PMID 26774474 DOI: 10.1016/J.Celrep.2015.12.043  0.306
2016 Zhang F, Song W, Li S, Ajay V, Aguilo F, Bagchi A, Wohlschlegel JA, Zhang B, Walsh M. Abstract PR06: The enhancer landscape involves a core noncoding RNA protein interaction network forC-MYCexpression Cancer Research. 76. DOI: 10.1158/1538-7445.Nonrna15-Pr06  0.344
2015 Langousis G, Shimogawa MM, Saada EA, Vashisht AA, Spreafico R, Nager AR, Barshop WD, Nachury MV, Wohlschlegel JA, Hill KL. Loss of the BBSome perturbs endocytic trafficking and disrupts virulence of Trypanosoma brucei. Proceedings of the National Academy of Sciences of the United States of America. PMID 26721397 DOI: 10.1073/Pnas.1518079113  0.729
2015 Berg JM, Lee C, Chen L, Galvan L, Cepeda C, Chen JY, Peñagarikano O, Stein JL, Li A, Oguro-Ando A, Miller JA, Vashisht AA, Starks ME, Kite EP, Tam E, ... ... Wohlschlegel JA, et al. JAKMIP1, a Novel Regulator of Neuronal Translation, Modulates Synaptic Function and Autistic-like Behaviors in Mouse. Neuron. PMID 26627310 DOI: 10.1016/J.Neuron.2015.10.031  0.32
2015 Zhang S, Zhou B, Kang Y, Cui X, Liu A, Deleris A, Greenberg MV, Cui X, Qiu Q, Lu F, Wohlschlegel JA, Jacobsen SE, Cao X. C-terminal domains of a histone demethylase interact with a pair of transcription factors and mediate specific chromatin association. Cell Discovery. 1. PMID 26617990 DOI: 10.1038/Celldisc.2015.3  0.358
2015 Aguilo F, Zhang F, Sancho A, Fidalgo M, Di Cecilia S, Vashisht A, Lee DF, Chen CH, Rengasamy M, Andino B, Jahouh F, Roman A, Krig SR, Wang R, Zhang W, ... Wohlschlegel JA, et al. Coordination of m(6)A mRNA Methylation and Gene Transcription by ZFP217 Regulates Pluripotency and Reprogramming. Cell Stem Cell. PMID 26526723 DOI: 10.1016/J.Stem.2015.09.005  0.337
2015 Kwong PN, Chambers M, Vashisht AA, Turki-Judeh W, Yau TY, Wohlschlegel JA, Courey AJ. The Central Region of the Drosophila Co-Repressor Groucho as a Regulatory Hub. The Journal of Biological Chemistry. PMID 26483546 DOI: 10.1074/Jbc.M115.681171  0.376
2015 Nie M, Vashisht AA, Wohlschlegel JA, Boddy MN. High Confidence Fission Yeast SUMO Conjugates Identified by Tandem Denaturing Affinity Purification. Scientific Reports. 5: 14389. PMID 26404184 DOI: 10.1038/Srep14389  0.396
2015 Ch'ng TH, DeSalvo M, Lin P, Vashisht A, Wohlschlegel JA, Martin KC. Cell biological mechanisms of activity-dependent synapse to nucleus translocation of CRTC1 in neurons. Frontiers in Molecular Neuroscience. 8: 48. PMID 26388727 DOI: 10.3389/Fnmol.2015.00048  0.32
2015 Zinovyeva AY, Veksler-Lublinsky I, Vashisht AA, Wohlschlegel JA, Ambros VR. Caenorhabditis elegans ALG-1 antimorphic mutations uncover functions for Argonaute in microRNA guide strand selection and passenger strand disposal. Proceedings of the National Academy of Sciences of the United States of America. 112: E5271-80. PMID 26351692 DOI: 10.1073/Pnas.1506576112  0.307
2015 Palou G, Palou R, Zeng F, Vashisht AA, Wohlschlegel JA, Quintana DG. Three Different Pathways Prevent Chromosome Segregation in the Presence of DNA Damage or Replication Stress in Budding Yeast. Plos Genetics. 11: e1005468. PMID 26332045 DOI: 10.1371/Journal.Pgen.1005468  0.315
2015 Medlock AE, Shiferaw MT, Marcero JR, Vashisht AA, Wohlschlegel JA, Phillips JD, Dailey HA. Identification of the Mitochondrial Heme Metabolism Complex. Plos One. 10: e0135896. PMID 26287972 DOI: 10.1371/Journal.Pone.0135896  0.369
2015 Goodwin JF, Kothari V, Drake JM, Zhao S, Dylgjeri E, Dean JL, Schiewer MJ, McNair C, Jones JK, Aytes A, Magee MS, Snook AE, Zhu Z, Den RB, Birbe RC, ... ... Wohlschlegel JA, et al. DNA-PKcs-Mediated Transcriptional Regulation Drives Prostate Cancer Progression and Metastasis. Cancer Cell. 28: 97-113. PMID 26175416 DOI: 10.1016/J.Ccell.2015.06.004  0.316
2015 Xu T, Park SK, Venable JD, Wohlschlegel JA, Diedrich JK, Cociorva D, Lu B, Liao L, Hewel J, Han X, Wong CC, Fonslow B, Delahunty C, Gao Y, Shah H, et al. ProLuCID: An improved SEQUEST-like algorithm with enhanced sensitivity and specificity. Journal of Proteomics. PMID 26171723 DOI: 10.1016/J.Jprot.2015.07.001  0.365
2015 Loveless TB, Topacio BR, Vashisht AA, Galaang S, Ulrich KM, Young BD, Wohlschlegel JA, Toczyski DP. DNA Damage Regulates Translation through β-TRCP Targeting of CReP. Plos Genetics. 11: e1005292. PMID 26091241 DOI: 10.1371/Journal.Pgen.1005292  0.378
2015 Shimogawa MM, Saada EA, Vashisht AA, Barshop WD, Wohlschlegel JA, Hill KL. Cell Surface Proteomics Provides Insight into Stage-Specific Remodeling of the Host-Parasite Interface in Trypanosoma brucei. Molecular & Cellular Proteomics : McP. 14: 1977-88. PMID 25963835 DOI: 10.1074/Mcp.M114.045146  0.709
2015 Vashisht AA, Yu CC, Sharma T, Ro K, Wohlschlegel JA. The Association of the Xeroderma Pigmentosum Group D DNA Helicase (XPD) with Transcription Factor IIH Is Regulated by the Cytosolic Iron-Sulfur Cluster Assembly Pathway. The Journal of Biological Chemistry. 290: 14218-25. PMID 25897079 DOI: 10.1074/Jbc.M115.650762  0.314
2015 Wang Q, Barshop WD, Bian M, Vashisht AA, He R, Yu X, Liu B, Nguyen P, Liu X, Zhao X, Wohlschlegel JA, Lin C. The blue light-dependent phosphorylation of the CCE domain determines the photosensitivity of Arabidopsis CRY2. Molecular Plant. 8: 631-43. PMID 25792146 DOI: 10.1016/J.Molp.2015.03.005  0.711
2015 Pentecost M, Vashisht AA, Lester T, Voros T, Beaty SM, Park A, Wang YE, Yun TE, Freiberg AN, Wohlschlegel JA, Lee B. Evidence for ubiquitin-regulated nuclear and subnuclear trafficking among Paramyxovirinae matrix proteins. Plos Pathogens. 11: e1004739. PMID 25782006 DOI: 10.1371/Journal.Ppat.1004739  0.312
2015 Chen AL, Kim EW, Toh JY, Vashisht AA, Rashoff AQ, Van C, Huang AS, Moon AS, Bell HN, Bentolila LA, Wohlschlegel JA, Bradley PJ. Novel components of the Toxoplasma inner membrane complex revealed by BioID. Mbio. 6: e02357-14. PMID 25691595 DOI: 10.1128/Mbio.02357-14  0.365
2015 Xue Y, Van C, Pradhan SK, Su T, Gehrke J, Kuryan BG, Kitada T, Vashisht A, Tran N, Wohlschlegel J, Peterson CL, Kurdistani SK, Carey MF. The Ino80 complex prevents invasion of euchromatin into silent chromatin. Genes & Development. 29: 350-5. PMID 25691465 DOI: 10.1101/Gad.256255.114  0.351
2015 Sancho A, Li S, Paul T, Zhang F, Aguilo F, Vashisht A, Balasubramaniyan N, Leleiko NS, Suchy FJ, Wohlschlegel JA, Zhang W, Walsh MJ. CHD6 regulates the topological arrangement of the CFTR locus. Human Molecular Genetics. 24: 2724-32. PMID 25631877 DOI: 10.1093/Hmg/Ddv032  0.385
2015 Zhong X, Hale CJ, Nguyen M, Ausin I, Groth M, Hetzel J, Vashisht AA, Henderson IR, Wohlschlegel JA, Jacobsen SE. Domains rearranged methyltransferase3 controls DNA methylation and regulates RNA polymerase V transcript abundance in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 112: 911-6. PMID 25561521 DOI: 10.1073/Pnas.1423603112  0.328
2015 Senese S, Cheung K, Lo YC, Gholkar AA, Xia X, Wohlschlegel JA, Torres JZ. A unique insertion in STARD9's motor domain regulates its stability. Molecular Biology of the Cell. 26: 440-52. PMID 25501367 DOI: 10.1091/Mbc.E14-03-0829  0.349
2015 Ryu M, Wohlschlegel J, Philpott CC. Pcbp1 and Ncoa4 Regulate the Flux of Iron through Ferritin in Developing Erythroid Cells Blood. 126: 404-404. DOI: 10.1182/Blood.V126.23.404.404  0.304
2015 Goodwin JF, Kothari V, Drake JM, Zhao S, Dylgjeri E, Dean JL, Schiewer MJ, McNair C, Magee MS, Den RB, Zhu Z, Graham NA, Vashisht AA, Wohlschlegel JA, Graeber TG, et al. Abstract 1860: DNA-PK-mediated transcriptional regulation drives tumor progression and metastasis Endocrinology. 75: 1860-1860. DOI: 10.1158/1538-7445.Am2015-1860  0.301
2014 Groth M, Stroud H, Feng S, Greenberg MV, Vashisht AA, Wohlschlegel JA, Jacobsen SE, Ausin I. SNF2 chromatin remodeler-family proteins FRG1 and -2 are required for RNA-directed DNA methylation. Proceedings of the National Academy of Sciences of the United States of America. 111: 17666-71. PMID 25425661 DOI: 10.1073/Pnas.1420515111  0.363
2014 Sharma S, Wongpalee SP, Vashisht A, Wohlschlegel JA, Black DL. Stem-loop 4 of U1 snRNA is essential for splicing and interacts with the U2 snRNP-specific SF3A1 protein during spliceosome assembly. Genes & Development. 28: 2518-31. PMID 25403181 DOI: 10.1101/Gad.248625.114  0.336
2014 Du J, Johnson LM, Groth M, Feng S, Hale CJ, Li S, Vashisht AA, Wohlschlegel JA, Patel DJ, Jacobsen SE. Mechanism of DNA methylation-directed histone methylation by KRYPTONITE. Molecular Cell. 55: 495-504. PMID 25018018 DOI: 10.1016/J.Molcel.2014.06.009  0.321
2014 Zilio N, Codlin S, Vashisht AA, Bitton DA, Head SR, Wohlschlegel JA, Bähler J, Boddy MN. A novel histone deacetylase complex in the control of transcription and genome stability. Molecular and Cellular Biology. 34: 3500-14. PMID 25002536 DOI: 10.1128/Mcb.00519-14  0.391
2014 Freire ER, Vashisht AA, Malvezzi AM, Zuberek J, Langousis G, Saada EA, Nascimento Jde F, Stepinski J, Darzynkiewicz E, Hill K, De Melo Neto OP, Wohlschlegel JA, Sturm NR, Campbell DA. eIF4F-like complexes formed by cap-binding homolog TbEIF4E5 with TbEIF4G1 or TbEIF4G2 are implicated in post-transcriptional regulation in Trypanosoma brucei. Rna (New York, N.Y.). 20: 1272-86. PMID 24962368 DOI: 10.1261/Rna.045534.114  0.41
2014 Saada EA, Kabututu ZP, Lopez M, Shimogawa MM, Langousis G, Oberholzer M, Riestra A, Jonsson ZO, Wohlschlegel JA, Hill KL. Insect stage-specific receptor adenylate cyclases are localized to distinct subdomains of the Trypanosoma brucei Flagellar membrane. Eukaryotic Cell. 13: 1064-76. PMID 24879126 DOI: 10.1128/Ec.00019-14  0.308
2014 Zhong X, Du J, Hale CJ, Gallego-Bartolome J, Feng S, Vashisht AA, Chory J, Wohlschlegel JA, Patel DJ, Jacobsen SE. Molecular mechanism of action of plant DRM de novo DNA methyltransferases. Cell. 157: 1050-60. PMID 24855943 DOI: 10.1016/J.Cell.2014.03.056  0.342
2014 Freire ER, Malvezzi AM, Vashisht AA, Zuberek J, Saada EA, Langousis G, Nascimento JD, Moura D, Darzynkiewicz E, Hill K, de Melo Neto OP, Wohlschlegel JA, Sturm NR, Campbell DA. Trypanosoma brucei translation initiation factor homolog EIF4E6 forms a tripartite cytosolic complex with EIF4G5 and a capping enzyme homolog. Eukaryotic Cell. 13: 896-908. PMID 24839125 DOI: 10.1128/Ec.00071-14  0.421
2014 Moissiard G, Bischof S, Husmann D, Pastor WA, Hale CJ, Yen L, Stroud H, Papikian A, Vashisht AA, Wohlschlegel JA, Jacobsen SE. Transcriptional gene silencing by Arabidopsis microrchidia homologues involves the formation of heteromers. Proceedings of the National Academy of Sciences of the United States of America. 111: 7474-9. PMID 24799676 DOI: 10.1073/Pnas.1406611111  0.376
2014 Edenberg ER, Vashisht AA, Topacio BR, Wohlschlegel JA, Toczyski DP. Hst3 is turned over by a replication stress-responsive SCF(Cdc4) phospho-degron. Proceedings of the National Academy of Sciences of the United States of America. 111: 5962-7. PMID 24715726 DOI: 10.1073/Pnas.1315325111  0.363
2014 Xue Y, Vashisht AA, Tan Y, Su T, Wohlschlegel JA. PRB1 is required for clipping of the histone H3 N terminal tail in Saccharomyces cerevisiae. Plos One. 9: e90496. PMID 24587380 DOI: 10.1371/Journal.Pone.0090496  0.305
2014 Edenberg ER, Vashisht A, Benanti JA, Wohlschlegel J, Toczyski DP. Rad53 downregulates mitotic gene transcription by inhibiting the transcriptional activator Ndd1. Molecular and Cellular Biology. 34: 725-38. PMID 24324011 DOI: 10.1128/Mcb.01056-13  0.343
2013 Vandeput F, Szabo-Fresnais N, Ahmad F, Kho C, Lee A, Krall J, Dunlop A, Hazel MW, Wohlschlegel JA, Hajjar RJ, Houslay MD, Manganiello VC, Movsesian MA. Selective regulation of cyclic nucleotide phosphodiesterase PDE3A isoforms. Proceedings of the National Academy of Sciences of the United States of America. 110: 19778-83. PMID 24248367 DOI: 10.1073/Pnas.1305427110  0.347
2013 Downey M, Knight B, Vashisht AA, Seller CA, Wohlschlegel JA, Shore D, Toczyski DP. Gcn5 and sirtuins regulate acetylation of the ribosomal protein transcription factor Ifh1. Current Biology : Cb. 23: 1638-48. PMID 23973296 DOI: 10.1016/J.Cub.2013.06.050  0.393
2013 Stehling O, Mascarenhas J, Vashisht AA, Sheftel AD, Niggemeyer B, Rösser R, Pierik AJ, Wohlschlegel JA, Lill R. Human CIA2A-FAM96A and CIA2B-FAM96B integrate iron homeostasis and maturation of different subsets of cytosolic-nuclear iron-sulfur proteins. Cell Metabolism. 18: 187-98. PMID 23891004 DOI: 10.1016/J.Cmet.2013.06.015  0.311
2013 Twu O, de Miguel N, Lustig G, Stevens GC, Vashisht AA, Wohlschlegel JA, Johnson PJ. Trichomonas vaginalis exosomes deliver cargo to host cells and mediate host∶parasite interactions. Plos Pathogens. 9: e1003482. PMID 23853596 DOI: 10.1371/Journal.Ppat.1003482  0.302
2013 Pan YR, Sun M, Wohlschlegel J, Reed SI. Cks1 enhances transcription efficiency at the GAL1 locus by linking the Paf1 complex to the 19S proteasome. Eukaryotic Cell. 12: 1192-201. PMID 23825181 DOI: 10.1128/Ec.00151-13  0.398
2013 Cepeda D, Ng HF, Sharifi HR, Mahmoudi S, Cerrato VS, Fredlund E, Magnusson K, Nilsson H, Malyukova A, Rantala J, Klevebring D, Viñals F, Bhaskaran N, Zakaria SM, Rahmanto AS, ... ... Wohlschlegel J, et al. CDK-mediated activation of the SCF(FBXO) (28) ubiquitin ligase promotes MYC-driven transcription and tumourigenesis and predicts poor survival in breast cancer. Embo Molecular Medicine. 5: 999-1018. PMID 23776131 DOI: 10.1002/Emmm.201202341  0.349
2013 Lee YJ, Lee CY, Grzechnik A, Gonzales-Zubiate F, Vashisht AA, Lee A, Wohlschlegel J, Chanfreau GF. RNA polymerase I stability couples cellular growth to metal availability. Molecular Cell. 51: 105-15. PMID 23747013 DOI: 10.1016/J.Molcel.2013.05.005  0.331
2013 Dehé PM, Coulon S, Scaglione S, Shanahan P, Takedachi A, Wohlschlegel JA, Yates JR, Llorente B, Russell P, Gaillard PH. Regulation of Mus81-Eme1 Holliday junction resolvase in response to DNA damage. Nature Structural & Molecular Biology. 20: 598-603. PMID 23584455 DOI: 10.1038/Nsmb.2550  0.311
2013 Beck JR, Fung C, Straub KW, Coppens I, Vashisht AA, Wohlschlegel JA, Bradley PJ. A Toxoplasma palmitoyl acyl transferase and the palmitoylated armadillo repeat protein TgARO govern apical rhoptry tethering and reveal a critical role for the rhoptries in host cell invasion but not egress. Plos Pathogens. 9: e1003162. PMID 23408890 DOI: 10.1371/Journal.Ppat.1003162  0.372
2013 Kim MS, Machida Y, Vashisht AA, Wohlschlegel JA, Pang YP, Machida YJ. Regulation of error-prone translesion synthesis by Spartan/C1orf124. Nucleic Acids Research. 41: 1661-8. PMID 23254330 DOI: 10.1093/Nar/Gks1267  0.337
2012 Chen XF, Lehmann L, Lin JJ, Vashisht A, Schmidt R, Ferrari R, Huang C, McKee R, Mosley A, Plath K, Kurdistani SK, Wohlschlegel J, Carey M. Mediator and SAGA have distinct roles in Pol II preinitiation complex assembly and function. Cell Reports. 2: 1061-7. PMID 23177621 DOI: 10.1016/J.Celrep.2012.10.019  0.354
2012 Caro E, Stroud H, Greenberg MV, Bernatavichute YV, Feng S, Groth M, Vashisht AA, Wohlschlegel J, Jacobsen SE. The SET-domain protein SUVR5 mediates H3K9me2 deposition and silencing at stimulus response genes in a DNA methylation-independent manner. Plos Genetics. 8: e1002995. PMID 23071452 DOI: 10.1371/Journal.Pgen.1002995  0.35
2012 Sun Y, Vashisht AA, Tchieu J, Wohlschlegel JA, Dreier L. Voltage-dependent anion channels (VDACs) recruit Parkin to defective mitochondria to promote mitochondrial autophagy. The Journal of Biological Chemistry. 287: 40652-60. PMID 23060438 DOI: 10.1074/Jbc.M112.419721  0.31
2012 Du J, Zhong X, Bernatavichute YV, Stroud H, Feng S, Caro E, Vashisht AA, Terragni J, Chin HG, Tu A, Hetzel J, Wohlschlegel JA, Pradhan S, Patel DJ, Jacobsen SE. Dual binding of chromomethylase domains to H3K9me2-containing nucleosomes directs DNA methylation in plants. Cell. 151: 167-80. PMID 23021223 DOI: 10.1016/J.Cell.2012.07.034  0.344
2012 Lehmann L, Ferrari R, Vashisht AA, Wohlschlegel JA, Kurdistani SK, Carey M. Polycomb repressive complex 1 (PRC1) disassembles RNA polymerase II preinitiation complexes. The Journal of Biological Chemistry. 287: 35784-94. PMID 22910904 DOI: 10.1074/Jbc.M112.397430  0.393
2012 Nie M, Aslanian A, Prudden J, Heideker J, Vashisht AA, Wohlschlegel JA, Yates JR, Boddy MN. Dual recruitment of Cdc48 (p97)-Ufd1-Npl4 ubiquitin-selective segregase by small ubiquitin-like modifier protein (SUMO) and ubiquitin in SUMO-targeted ubiquitin ligase-mediated genome stability functions. The Journal of Biological Chemistry. 287: 29610-9. PMID 22730331 DOI: 10.1074/Jbc.M112.379768  0.353
2012 Stehling O, Vashisht AA, Mascarenhas J, Jonsson ZO, Sharma T, Netz DJ, Pierik AJ, Wohlschlegel JA, Lill R. MMS19 assembles iron-sulfur proteins required for DNA metabolism and genomic integrity. Science (New York, N.Y.). 337: 195-9. PMID 22678362 DOI: 10.1126/Science.1219723  0.35
2012 Ausin I, Greenberg MV, Simanshu DK, Hale CJ, Vashisht AA, Simon SA, Lee TF, Feng S, Española SD, Meyers BC, Wohlschlegel JA, Patel DJ, Jacobsen SE. INVOLVED IN DE NOVO 2-containing complex involved in RNA-directed DNA methylation in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 109: 8374-81. PMID 22592791 DOI: 10.1073/Pnas.1206638109  0.364
2012 Thivierge C, Makil N, Flamand M, Vasale JJ, Mello CC, Wohlschlegel J, Conte D, Duchaine TF. Tudor domain ERI-5 tethers an RNA-dependent RNA polymerase to DCR-1 to potentiate endo-RNAi. Nature Structural & Molecular Biology. 19: 90-7. PMID 22179787 DOI: 10.1038/Nsmb.2186  0.323
2011 Lomenick B, Jung G, Wohlschlegel JA, Huang J. Target identification using drug affinity responsive target stability (DARTS). Current Protocols in Chemical Biology. 3: 163-180. PMID 22229126 DOI: 10.1002/9780470559277.Ch110180  0.318
2011 Lin JJ, Lehmann LW, Bonora G, Sridharan R, Vashisht AA, Tran N, Plath K, Wohlschlegel JA, Carey M. Mediator coordinates PIC assembly with recruitment of CHD1. Genes & Development. 25: 2198-209. PMID 21979373 DOI: 10.1101/Gad.17554711  0.414
2011 Law JA, Vashisht AA, Wohlschlegel JA, Jacobsen SE. SHH1, a homeodomain protein required for DNA methylation, as well as RDR2, RDM4, and chromatin remodeling factors, associate with RNA polymerase IV. Plos Genetics. 7: e1002195. PMID 21811420 DOI: 10.1371/Journal.Pgen.1002195  0.339
2011 Madina BR, Kuppan G, Vashisht AA, Liang YH, Downey KM, Wohlschlegel JA, Ji X, Sze SH, Sacchettini JC, Read LK, Cruz-Reyes J. Guide RNA biogenesis involves a novel RNase III family endoribonuclease in Trypanosoma brucei. Rna (New York, N.Y.). 17: 1821-30. PMID 21810935 DOI: 10.1261/Rna.2815911  0.34
2011 Oberholzer M, Langousis G, Nguyen HT, Saada EA, Shimogawa MM, Jonsson ZO, Nguyen SM, Wohlschlegel JA, Hill KL. Independent analysis of the flagellum surface and matrix proteomes provides insight into flagellum signaling in mammalian-infectious Trypanosoma brucei. Molecular & Cellular Proteomics : McP. 10: M111.010538. PMID 21685506 DOI: 10.1074/Mcp.M111.010538  0.343
2011 Shibata E, Abbas T, Huang X, Wohlschlegel JA, Dutta A. Selective ubiquitylation of p21 and Cdt1 by UBCH8 and UBE2G ubiquitin-conjugating enzymes via the CRL4Cdt2 ubiquitin ligase complex. Molecular and Cellular Biology. 31: 3136-45. PMID 21628527 DOI: 10.1128/Mcb.05496-11  0.558
2011 Prudden J, Perry JJ, Nie M, Vashisht AA, Arvai AS, Hitomi C, Guenther G, Wohlschlegel JA, Tainer JA, Boddy MN. DNA repair and global sumoylation are regulated by distinct Ubc9 noncovalent complexes. Molecular and Cellular Biology. 31: 2299-310. PMID 21444718 DOI: 10.1128/Mcb.05188-11  0.357
2011 Smith AJ, Chudnovsky L, Simoes-Barbosa A, Delgadillo-Correa MG, Jonsson ZO, Wohlschlegel JA, Johnson PJ. Novel core promoter elements and a cognate transcription factor in the divergent unicellular eukaryote Trichomonas vaginalis. Molecular and Cellular Biology. 31: 1444-58. PMID 21245378 DOI: 10.1128/Mcb.00745-10  0.321
2010 Duch A, Palou G, Jonsson ZO, Palou R, Calvo E, Wohlschlegel J, Quintana DG. A Dbf4 mutant contributes to bypassing the Rad53-mediated block of origins of replication in response to genotoxic stress. The Journal of Biological Chemistry. 286: 2486-91. PMID 21098477 DOI: 10.1074/Jbc.M110.190843  0.329
2010 Lopez-Mosqueda J, Maas NL, Jonsson ZO, Defazio-Eli LG, Wohlschlegel J, Toczyski DP. Damage-induced phosphorylation of Sld3 is important to block late origin firing. Nature. 467: 479-83. PMID 20865002 DOI: 10.1038/Nature09377  0.355
2010 de Miguel N, Lustig G, Twu O, Chattopadhyay A, Wohlschlegel JA, Johnson PJ. Proteome analysis of the surface of Trichomonas vaginalis reveals novel proteins and strain-dependent differential expression. Molecular & Cellular Proteomics : McP. 9: 1554-66. PMID 20467041 DOI: 10.1074/Mcp.M000022-Mcp201  0.332
2010 Spielewoy N, Guaderrama M, Wohlschlegel JA, Ashe M, Yates JR, Wittenberg C. Npr2, yeast homolog of the human tumor suppressor NPRL2, is a target of Grr1 required for adaptation to growth on diverse nitrogen sources. Eukaryotic Cell. 9: 592-601. PMID 20154027 DOI: 10.1128/Ec.00192-09  0.369
2010 Hernandez A, Madina BR, Ro K, Wohlschlegel JA, Willard B, Kinter MT, Cruz-Reyes J. REH2 RNA helicase in kinetoplastid mitochondria: ribonucleoprotein complexes and essential motifs for unwinding and guide RNA (gRNA) binding. The Journal of Biological Chemistry. 285: 1220-8. PMID 19850921 DOI: 10.1074/Jbc.M109.051862  0.305
2009 Machida YJ, Machida Y, Vashisht AA, Wohlschlegel JA, Dutta A. The deubiquitinating enzyme BAP1 regulates cell growth via interaction with HCF-1. The Journal of Biological Chemistry. 284: 34179-88. PMID 19815555 DOI: 10.1074/Jbc.M109.046755  0.545
2009 Chuang LC, Teixeira LK, Wohlschlegel JA, Henze M, Yates JR, Méndez J, Reed SI. Phosphorylation of Mcm2 by Cdc7 promotes pre-replication complex assembly during cell-cycle re-entry. Molecular Cell. 35: 206-16. PMID 19647517 DOI: 10.1016/J.Molcel.2009.06.014  0.371
2009 Zhou R, Czech B, Brennecke J, Sachidanandam R, Wohlschlegel JA, Perrimon N, Hannon GJ. Processing of Drosophila endo-siRNAs depends on a specific Loquacious isoform. Rna (New York, N.Y.). 15: 1886-95. PMID 19635780 DOI: 10.1261/Rna.1611309  0.338
2009 Vagin VV, Wohlschlegel J, Qu J, Jonsson Z, Huang X, Chuma S, Girard A, Sachidanandam R, Hannon GJ, Aravin AA. Proteomic analysis of murine Piwi proteins reveals a role for arginine methylation in specifying interaction with Tudor family members. Genes & Development. 23: 1749-62. PMID 19584108 DOI: 10.1101/Gad.1814809  0.379
2009 Wohlschlegel JA. Identification of SUMO-conjugated proteins and their SUMO attachment sites using proteomic mass spectrometry. Methods in Molecular Biology (Clifton, N.J.). 497: 33-49. PMID 19107409 DOI: 10.1007/978-1-59745-566-4_3  0.35
2009 Zamudio JR, Mittra B, Chattopadhyay A, Wohlschlegel JA, Sturm NR, Campbell DA. Trypanosoma brucei spliced leader RNA maturation by the cap 1 2'-O-ribose methyltransferase and SLA1 H/ACA snoRNA pseudouridine synthase complex. Molecular and Cellular Biology. 29: 1202-11. PMID 19103757 DOI: 10.1128/Mcb.01496-08  0.319
2008 de Bruin RA, Kalashnikova TI, Aslanian A, Wohlschlegel J, Chahwan C, Yates JR, Russell P, Wittenberg C. DNA replication checkpoint promotes G1-S transcription by inactivating the MBF repressor Nrm1. Proceedings of the National Academy of Sciences of the United States of America. 105: 11230-5. PMID 18682565 DOI: 10.1073/Pnas.0801106105  0.38
2008 Reed DE, Huang XM, Wohlschlegel JA, Levine MS, Senger K. DEAF-1 regulates immunity gene expression in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 105: 8351-6. PMID 18550807 DOI: 10.1073/Pnas.0802921105  0.359
2008 Bellare P, Small EC, Huang X, Wohlschlegel JA, Staley JP, Sontheimer EJ. A role for ubiquitin in the spliceosome assembly pathway. Nature Structural & Molecular Biology. 15: 444-51. PMID 18425143 DOI: 10.1038/Nsmb.1401  0.349
2008 Usaite R, Wohlschlegel J, Venable JD, Park SK, Nielsen J, Olsson L, Yates Iii JR. Characterization of global yeast quantitative proteome data generated from the wild-type and glucose repression saccharomyces cerevisiae strains: the comparison of two quantitative methods. Journal of Proteome Research. 7: 266-75. PMID 18173223 DOI: 10.1021/Pr700580M  0.761
2007 Zhu W, Ukomadu C, Jha S, Senga T, Dhar SK, Wohlschlegel JA, Nutt LK, Kornbluth S, Dutta A. Mcm10 and And-1/CTF4 recruit DNA polymerase alpha to chromatin for initiation of DNA replication. Genes & Development. 21: 2288-99. PMID 17761813 DOI: 10.1101/Gad.1585607  0.698
2006 de Bruin RA, Kalashnikova TI, Chahwan C, McDonald WH, Wohlschlegel J, Yates J, Russell P, Wittenberg C. Constraining G1-specific transcription to late G1 phase: the MBF-associated corepressor Nrm1 acts via negative feedback. Molecular Cell. 23: 483-96. PMID 16916637 DOI: 10.1016/J.Molcel.2006.06.025  0.313
2006 Raffa GD, Wohlschlegel J, Yates JR, Boddy MN. SUMO-binding motifs mediate the Rad60-dependent response to replicative stress and self-association. The Journal of Biological Chemistry. 281: 27973-81. PMID 16880212 DOI: 10.1074/Jbc.M601943200  0.383
2006 Sedgwick C, Rawluk M, Decesare J, Raithatha S, Wohlschlegel J, Semchuk P, Ellison M, Yates J, Stuart D. Saccharomyces cerevisiae Ime2 phosphorylates Sic1 at multiple PXS/T sites but is insufficient to trigger Sic1 degradation. The Biochemical Journal. 399: 151-60. PMID 16776651 DOI: 10.1042/Bj20060363  0.335
2006 Martín V, Chahwan C, Gao H, Blais V, Wohlschlegel J, Yates JR, McGowan CH, Russell P. Sws1 is a conserved regulator of homologous recombination in eukaryotic cells. The Embo Journal. 25: 2564-74. PMID 16710300 DOI: 10.1038/Sj.Emboj.7601141  0.407
2006 Ernkvist M, Aase K, Ukomadu C, Wohlschlegel J, Blackman R, Veitonmäki N, Bratt A, Dutta A, Holmgren L. p130-angiomotin associates to actin and controls endothelial cell shape. The Febs Journal. 273: 2000-11. PMID 16640563 DOI: 10.1111/J.1742-4658.2006.05216.X  0.498
2006 Wohlschlegel JA, Johnson ES, Reed SI, Yates JR. Improved identification of SUMO attachment sites using C-terminal SUMO mutants and tailored protease digestion strategies. Journal of Proteome Research. 5: 761-70. PMID 16602682 DOI: 10.1021/Pr050451O  0.345
2006 Pebernard S, Wohlschlegel J, McDonald WH, Yates JR, Boddy MN. The Nse5-Nse6 dimer mediates DNA repair roles of the Smc5-Smc6 complex. Molecular and Cellular Biology. 26: 1617-30. PMID 16478984 DOI: 10.1128/Mcb.26.5.1617-1630.2006  0.34
2006 Duchaine TF, Wohlschlegel JA, Kennedy S, Bei Y, Conte D, Pang K, Brownell DR, Harding S, Mitani S, Ruvkun G, Yates JR, Mello CC. Functional proteomics reveals the biochemical niche of C. elegans DCR-1 in multiple small-RNA-mediated pathways. Cell. 124: 343-54. PMID 16439208 DOI: 10.1016/J.Cell.2005.11.036  0.305
2005 Liu J, Rivas FV, Wohlschlegel J, Yates JR, Parker R, Hannon GJ. A role for the P-body component GW182 in microRNA function. Nature Cell Biology. 7: 1261-6. PMID 16284623 DOI: 10.1038/Ncb1333  0.323
2004 Venable JD, Dong MQ, Wohlschlegel J, Dillin A, Yates JR. Automated approach for quantitative analysis of complex peptide mixtures from tandem mass spectra. Nature Methods. 1: 39-45. PMID 15782151 DOI: 10.1038/Nmeth705  0.477
2004 Jónsson ZO, Jha S, Wohlschlegel JA, Dutta A. Rvb1p/Rvb2p recruit Arp5p and assemble a functional Ino80 chromatin remodeling complex. Molecular Cell. 16: 465-77. PMID 15525518 DOI: 10.1016/J.Molcel.2004.09.033  0.541
2004 Wohlschlegel JA, Johnson ES, Reed SI, Yates JR. Global analysis of protein sumoylation in Saccharomyces cerevisiae. The Journal of Biological Chemistry. 279: 45662-8. PMID 15326169 DOI: 10.1074/Jbc.M409203200  0.379
2004 Flick K, Ouni I, Wohlschlegel JA, Capati C, McDonald WH, Yates JR, Kaiser P. Proteolysis-independent regulation of the transcription factor Met4 by a single Lys 48-linked ubiquitin chain. Nature Cell Biology. 6: 634-41. PMID 15208638 DOI: 10.1038/Ncb1143  0.322
2002 Wohlschlegel JA, Kutok JL, Weng AP, Dutta A. Expression of geminin as a marker of cell proliferation in normal tissues and malignancies. The American Journal of Pathology. 161: 267-73. PMID 12107111 DOI: 10.1016/S0002-9440(10)64178-8  0.522
2002 Wohlschlegel JA, Dhar SK, Prokhorova TA, Dutta A, Walter JC. Xenopus Mcm10 binds to origins of DNA replication after Mcm2-7 and stimulates origin binding of Cdc45. Molecular Cell. 9: 233-40. PMID 11864598 DOI: 10.1016/S1097-2765(02)00456-2  0.525
2001 Dhar SK, Yoshida K, Machida Y, Khaira P, Chaudhuri B, Wohlschlegel JA, Leffak M, Yates J, Dutta A. Replication from oriP of Epstein-Barr virus requires human ORC and is inhibited by geminin. Cell. 106: 287-96. PMID 11509178 DOI: 10.1016/S0092-8674(01)00458-5  0.512
2001 Wohlschlegel JA, Dwyer BT, Takeda DY, Dutta A. Mutational analysis of the Cy motif from p21 reveals sequence degeneracy and specificity for different cyclin-dependent kinases. Molecular and Cellular Biology. 21: 4868-74. PMID 11438644 DOI: 10.1128/Mcb.21.15.4868-4874.2001  0.755
2001 Takeda DY, Wohlschlegel JA, Dutta A. A bipartite substrate recognition motif for cyclin-dependent kinases. The Journal of Biological Chemistry. 276: 1993-7. PMID 11067844 DOI: 10.1074/Jbc.M005719200  0.749
2000 Wohlschlegel JA, Dwyer BT, Dhar SK, Cvetic C, Walter JC, Dutta A. Inhibition of eukaryotic DNA replication by geminin binding to Cdt1. Science (New York, N.Y.). 290: 2309-12. PMID 11125146 DOI: 10.1126/Science.290.5500.2309  0.531
1999 Pinto S, Quintana DG, Smith P, Mihalek RM, Hou ZH, Boynton S, Jones CJ, Hendricks M, Velinzon K, Wohlschlegel JA, Austin RJ, Lane WS, Tully T, Dutta A. latheo encodes a subunit of the origin recognition complex and disrupts neuronal proliferation and adult olfactory memory when mutant. Neuron. 23: 45-54. PMID 10402192 DOI: 10.1016/S0896-6273(00)80752-7  0.505
Low-probability matches (unlikely to be authored by this person)
2003 Wohlschlegel JA, Yates JR. Proteomics: where's Waldo in yeast? Nature. 425: 671-2. PMID 14562083 DOI: 10.1038/425671A  0.298
2017 Steffen J, Vashisht AA, Wan J, Jen JC, Claypool SM, Wohlschlegel JA, Koehler CM. Rapid degradation of mutant SLC25A46 by the ubiquitin-proteasome system results in MFN1/2 mediated hyperfusion of mitochondria. Molecular Biology of the Cell. PMID 28057766 DOI: 10.1091/Mbc.E16-07-0545  0.296
2019 Patel SJ, Frey AG, Palenchar DJ, Achar S, Bullough KZ, Vashisht A, Wohlschlegel JA, Philpott CC. A PCBP1-BolA2 chaperone complex delivers iron for cytosolic [2Fe-2S] cluster assembly. Nature Chemical Biology. PMID 31406370 DOI: 10.1038/S41589-019-0330-6  0.295
2016 Kumar V, Madina BR, Gulati S, Vashisht AA, Kanyumbu C, Pieters B, Shakir A, Wohlschlegel JA, Read LK, Mooers BH, Cruz-Reyes J. REH2C Helicase and GRBC Subcomplexes may Base Pair through mRNA and Small Guide RNA in Kinetoplastid Editosomes. The Journal of Biological Chemistry. PMID 26769962 DOI: 10.1074/Jbc.M115.708164  0.294
2023 Zhong Z, Xue Y, Harris CJ, Wang M, Li Z, Ke Y, Liu M, Zhou J, Jami-Alahmadi Y, Feng S, Wohlschlegel JA, Jacobsen SE. MORC proteins regulate transcription factor binding by mediating chromatin compaction in active chromatin regions. Genome Biology. 24: 96. PMID 37101218 DOI: 10.1186/s13059-023-02939-4  0.293
2016 Drake JM, Paull EO, Graham NA, Lee JK, Smith BA, Stoyanova T, Faltermeier CM, Carlin DE, Vashisht A, Huang J, Wohlschlegel JA, Graeber TG, Witte ON, Stuart JM. Abstract 3882: Patient-specific druggable networks in lethal prostate cancer through proteome-guided multi-omic integration Cancer Research. 76: 3882-3882. DOI: 10.1158/1538-7445.Am2016-3882  0.293
2014 Tan Y, Sun D, Jiang W, Klotz-Noack K, Vashisht AA, Wohlschlegel J, Widschwendter M, Spruck C. PP2A-B55β antagonizes cyclin E1 proteolysis and promotes its dysregulation in cancer. Cancer Research. 74: 2006-14. PMID 24509904 DOI: 10.1158/0008-5472.Can-13-1263  0.292
2019 Heinzelman P, Powers DN, Wohlschlegel JA, John V. Shotgun Proteomic Profiling of Bloodborne Nanoscale Extracellular Vesicles. Methods in Molecular Biology (Clifton, N.J.). 1897: 403-416. PMID 30539460 DOI: 10.1007/978-1-4939-8935-5_32  0.29
2023 Pasquarelli RR, Back PS, Sha J, Wohlschlegel JA, Bradley PJ. Identification of IMC43, a novel IMC protein that collaborates with IMC32 to form an essential daughter bud assembly complex in Toxoplasma gondii. Plos Pathogens. 19: e1011707. PMID 37782662 DOI: 10.1371/journal.ppat.1011707  0.287
2009 Vashisht AA, Zumbrennen KB, Huang X, Powers DN, Durazo A, Sun D, Bhaskaran N, Persson A, Uhlen M, Sangfelt O, Spruck C, Leibold EA, Wohlschlegel JA. Control of iron homeostasis by an iron-regulated ubiquitin ligase. Science (New York, N.Y.). 326: 718-21. PMID 19762596 DOI: 10.1126/Science.1176333  0.287
2008 Czech B, Malone CD, Zhou R, Stark A, Schlingeheyde C, Dus M, Perrimon N, Kellis M, Wohlschlegel JA, Sachidanandam R, Hannon GJ, Brennecke J. An endogenous small interfering RNA pathway in Drosophila. Nature. 453: 798-802. PMID 18463631 DOI: 10.1038/Nature07007  0.287
2016 Melber A, Na U, Vashisht A, Weiler BD, Lill R, Wohlschlegel JA, Winge DR. Role of Nfu1 and Bol3 in iron-sulfur cluster transfer to mitochondrial clients. Elife. 5. PMID 27532773 DOI: 10.7554/Elife.15991  0.284
2016 Wang Q, Zuo Z, Wang X, Gu L, Yoshizumi T, Yang Z, Yang L, Liu Q, Liu W, Han YJ, Kim JI, Liu B, Wohlschlegel JA, Matsui M, Oka Y, et al. Photoactivation and inactivation of Arabidopsis cryptochrome 2. Science (New York, N.Y.). 354: 343-347. PMID 27846570 DOI: 10.1126/Science.Aaf9030  0.283
2017 Li D, Palanca AMS, Won SY, Gao L, Feng Y, Vashisht AA, Liu L, Zhao Y, Liu X, Wu X, Li S, Le B, Kim YJ, Yang G, Li S, ... ... Wohlschlegel JA, et al. Author response: The MBD7 complex promotes expression of methylated transgenes without significantly altering their methylation status Elife. DOI: 10.7554/Elife.19893.035  0.283
2008 Simoes-Barbosa A, Meloni D, Wohlschlegel JA, Konarska MM, Johnson PJ. Spliceosomal snRNAs in the unicellular eukaryote Trichomonas vaginalis are structurally conserved but lack a 5'-cap structure. Rna (New York, N.Y.). 14: 1617-31. PMID 18596255 DOI: 10.1261/Rna.1045408  0.282
2007 Venable JD, Wohlschlegel J, McClatchy DB, Park SK, Yates JR. Relative quantification of stable isotope labeled peptides using a linear ion trap-Orbitrap hybrid mass spectrometer. Analytical Chemistry. 79: 3056-64. PMID 17367114 DOI: 10.1021/Ac062054I  0.282
2009 Lomenick B, Hao R, Jonai N, Chin RM, Aghajan M, Warburton S, Wang J, Wu RP, Gomez F, Loo JA, Wohlschlegel JA, Vondriska TM, Pelletier J, Herschman HR, Clardy J, et al. Target identification using drug affinity responsive target stability (DARTS). Proceedings of the National Academy of Sciences of the United States of America. 106: 21984-9. PMID 19995983 DOI: 10.1073/Pnas.0910040106  0.282
2007 Kaiser P, Wohlschlegel J. Identification of ubiquitination sites and determination of ubiquitin-chain architectures by mass spectrometry. Methods in Enzymology. 399: 266-77. PMID 16338362 DOI: 10.1016/S0076-6879(05)99018-6  0.281
2009 Konopka G, Bomar JM, Winden K, Coppola G, Jonsson ZO, Gao F, Peng S, Preuss TM, Wohlschlegel JA, Geschwind DH. Human-specific transcriptional regulation of CNS development genes by FOXP2. Nature. 462: 213-7. PMID 19907493 DOI: 10.1038/Nature08549  0.279
2018 Kerins MJ, Milligan J, Wohlschlegel JA, Ooi A. FH inactivation in hereditary leiomyomatosis and renal cell cancer is synthetic lethal with ferroptosis induction. Cancer Science. PMID 29917289 DOI: 10.1111/Cas.13701  0.278
2016 Flamand MN, Wu E, Vashisht A, Jannot G, Keiper BD, Simard MJ, Wohlschlegel J, Duchaine TF. Poly(A)-binding proteins are required for microRNA-mediated silencing and to promote target deadenylation in C. elegans. Nucleic Acids Research. PMID 27095199 DOI: 10.1093/Nar/Gkw276  0.277
2015 Philpott CC, Frey AG, Ryu M, Palenchar D, Wildemann J, Vashisht AA, Wohlschlegel J, Bullough K. Special Delivery: The Role of Iron Chaperones in the Distribution of Iron in Developing Red Cells Blood. 126: SCI-45-SCI-45. DOI: 10.1182/Blood.V126.23.Sci-45.Sci-45  0.276
2018 Mota CM, Chen AL, Wang K, Nadipuram S, Vashisht AA, Wohlschlegel JA, Mineo TWP, Bradley PJ. Retraction Note: New molecular tools in Neospora caninum for studying apicomplexan parasite proteins. Scientific Reports. 8: 10964. PMID 30006618 DOI: 10.1038/S41598-018-28052-2  0.274
2015 Jonas SJ, Stieg AZ, Richardson W, Guo S, Powers DN, Wohlschlegel J, Dunn B. Protein Adsorption Alters Hydrophobic Surfaces Used for Suspension Culture of Pluripotent Stem Cells. The Journal of Physical Chemistry Letters. 6: 388-93. PMID 26261952 DOI: 10.1021/Jz502520R  0.272
2022 Diego-Martin B, Pérez-Alemany J, Candela-Ferre J, Corbalán-Acedo A, Pereyra J, Alabadí D, Jami-Alahmadi Y, Wohlschlegel J, Gallego-Bartolomé J. The TRIPLE PHD FINGERS proteins are required for SWI/SNF complex-mediated +1 nucleosome positioning and transcription start site determination in Arabidopsis. Nucleic Acids Research. PMID 36189880 DOI: 10.1093/nar/gkac826  0.271
2018 Metz KA, Teng X, Coppens I, Lamb HM, Wagner BE, Rosenfeld JA, Chen X, Zhang Y, Kim HJ, Meadow ME, Wang TS, Haberlandt ED, Anderson GW, Leshinsky-Silver E, Bi W, ... ... Wohlschlegel JA, et al. KCTD7 deficiency defines a distinct neurodegenerative disorder with a conserved autophagy-lysosome defect. Annals of Neurology. PMID 30295347 DOI: 10.1002/Ana.25351  0.269
2023 Boone BA, Ichino L, Wang S, Gardiner J, Yun J, Jami-Alahmadi Y, Sha J, Mendoza CP, Steelman BJ, van Aardenne A, Kira-Lucas S, Trentchev I, Wohlschlegel JA, Jacobsen SE. ACD15, ACD21, and SLN regulate the accumulation and mobility of MBD6 to silence genes and transposable elements. Science Advances. 9: eadi9036. PMID 37967186 DOI: 10.1126/sciadv.adi9036  0.268
2023 Boone BA, Ichino L, Wang S, Gardiner J, Yun J, Jami-Alahmadi Y, Sha J, Mendoza CP, Steelman BJ, van Aardenne A, Kira-Lucas S, Trentchev I, Wohlschlegel JA, Jacobsen SE. ACD15, ACD21, and SLN regulate accumulation and mobility of MBD6 to silence genes and transposable elements. Biorxiv : the Preprint Server For Biology. PMID 37662299 DOI: 10.1101/2023.08.23.554494  0.268
2016 Wongpalee SP, Vashisht A, Sharma S, Chui D, Wohlschlegel JA, Black DL. Author response: Large-scale remodeling of a repressed exon ribonucleoprotein to an exon definition complex active for splicing Elife. DOI: 10.7554/Elife.19743.014  0.267
2023 Damianov A, Lin CH, Huang J, Zhou L, Jami-Alahmadi Y, Wohlschlegel J, Black DL. The apoptotic splicing regulators RBM5 and RBM10 are subunits of the U2 snRNP engaged with intron branch sites on chromatin. Biorxiv : the Preprint Server For Biology. PMID 37790489 DOI: 10.1101/2023.09.21.558883  0.266
2018 Lee JK, Bangayan NJ, Chai T, Smith BA, Pariva TE, Yun S, Vashisht A, Zhang Q, Park JW, Corey E, Huang J, Graeber TG, Wohlschlegel J, Witte ON. Systemic surfaceome profiling identifies target antigens for immune-based therapy in subtypes of advanced prostate cancer. Proceedings of the National Academy of Sciences of the United States of America. PMID 29686080 DOI: 10.1073/Pnas.1802354115  0.265
2023 Quan JJ, Nikolov LA, Sha J, Wohlschlegel JA, Bradley PJ. encodes an array of TBC-domain containing proteins including an essential regulator that targets Rab2 in the secretory pathway. Biorxiv : the Preprint Server For Biology. PMID 37398139 DOI: 10.1101/2023.05.28.542599  0.264
2018 Twu O, Miguel Nd, Lustig G, Stevens G, Vashishit A, Wohlschlegel J, Johnson P. 895 Trichomonas vaginalis exosomes deliver cargo to host cells and mediate host: Parasite interactions Journal of Investigative Dermatology. 138. DOI: 10.1016/J.Jid.2018.03.907  0.264
2024 Pasquarelli RR, Quan JJ, Yang V, Britton TA, Sha J, Wohlschlegel JA, Bradley PJ. Characterization and functional analysis of Golgi-associated proteins identified by proximity labelling. Biorxiv : the Preprint Server For Biology. PMID 38352341 DOI: 10.1101/2024.02.02.578703  0.261
2007 Motoyama A, Xu T, Ruse CI, Wohlschlegel JA, Yates JR. Anion and cation mixed-bed ion exchange for enhanced multidimensional separations of peptides and phosphopeptides. Analytical Chemistry. 79: 3623-34. PMID 17411013 DOI: 10.1021/Ac062292D  0.256
2007 Sadygov R, Wohlschlegel J, Park SK, Xu T, Yates JR. Central limit theorem as an approximation for intensity-based scoring function. Analytical Chemistry. 78: 89-95. PMID 16383314 DOI: 10.1021/Ac051206R  0.254
2023 Back PS, Moon AS, Pasquarelli RR, Bell HN, Torres JA, Chen AL, Sha J, Vashisht AA, Wohlschlegel JA, Bradley PJ. IMC29 Plays an Important Role in Endodyogeny and Reveals New Components of the Daughter-Enriched IMC Proteome. Mbio. e0304222. PMID 36622147 DOI: 10.1128/mbio.03042-22  0.253
2015 Pentecost M, Vashisht AA, Lester T, Voros T, Beaty SM, Park A, Wang YE, Yun TE, Freiberg AN, Wohlschlegel JA, Lee B. Quantitative BiFC analysis of Nipah, Hendra, Sendai and Mumps virus matrix ubiquitination regulated by a lysine within the NLS bp . Plos Pathogens. DOI: 10.1371/Journal.Ppat.1004739.G004  0.252
2020 Geekiyanage H, Rayatpisheh S, Wohlschlegel JA, Brown R, Ambros V. Extracellular microRNAs in human circulation are associated with miRISC complexes that are accessible to anti-AGO2 antibody and can bind target mimic oligonucleotides. Proceedings of the National Academy of Sciences of the United States of America. PMID 32929008 DOI: 10.1073/Pnas.2008323117  0.249
2023 Wang M, Zhong Z, Gallego-Bartolomé J, Feng S, Shih YH, Liu M, Zhou J, Richey JC, Ng C, Jami-Alahmadi Y, Wohlschlegel J, Wu K, Jacobsen SE. Arabidopsis TRB proteins function in H3K4me3 demethylation by recruiting JMJ14. Nature Communications. 14: 1736. PMID 36977663 DOI: 10.1038/s41467-023-37263-9  0.247
2010 Law JA, Ausin I, Johnson LM, Vashisht AA, Zhu JK, Wohlschlegel JA, Jacobsen SE. A protein complex required for polymerase V transcripts and RNA- directed DNA methylation in Arabidopsis. Current Biology : Cb. 20: 951-6. PMID 20409711 DOI: 10.1016/J.Cub.2010.03.062  0.245
2017 Fetherolf MM, Boyd SD, Taylor AB, Kim HJ, Wohlschlegel JA, Blackburn NJ, Hart PJ, Winge DR, Winkler DD. Copper-zinc superoxide dismutase is activated through a sulfenic acid intermediate at a copper-ion entry site. The Journal of Biological Chemistry. PMID 28533431 DOI: 10.1074/Jbc.M117.775981  0.244
2021 Ichino L, Boone BA, Strauskulage L, Harris CJ, Kaur G, Gladstone MA, Tan M, Feng S, Jami-Alahmadi Y, Duttke SH, Wohlschlegel JA, Cheng X, Redding S, Jacobsen SE. MBD5 and MBD6 couple DNA methylation to gene silencing through the J-domain protein SILENZIO. Science (New York, N.Y.). PMID 34083448 DOI: 10.1126/science.abg6130  0.243
2009 Fabian MR, Mathonnet G, Sundermeier T, Mathys H, Zipprich JT, Svitkin YV, Rivas F, Jinek M, Wohlschlegel J, Doudna JA, Chen CY, Shyu AB, Yates JR, Hannon GJ, Filipowicz W, et al. Mammalian miRNA RISC recruits CAF1 and PABP to affect PABP-dependent deadenylation. Molecular Cell. 35: 868-80. PMID 19716330 DOI: 10.1016/J.Molcel.2009.08.004  0.243
2020 Sharma S, LeClaire M, Wohlschlegel J, Gimzewski J. Impact of isolation methods on the biophysical heterogeneity of single extracellular vesicles. Scientific Reports. 10: 13327. PMID 32770003 DOI: 10.1038/S41598-020-70245-1  0.24
2024 Damianov A, Lin CH, Huang J, Zhou L, Jami-Alahmadi Y, Peyda P, Wohlschlegel J, Black DL. The splicing regulators RBM5 and RBM10 are subunits of the U2 snRNP engaged with intron branch sites on chromatin. Molecular Cell. PMID 38537639 DOI: 10.1016/j.molcel.2024.02.039  0.24
2022 Oravcová M, Nie M, Zilio N, Maeda S, Jami-Alahmadi Y, Lazzerini-Denchi E, Wohlschlegel JA, Ulrich HD, Otomo T, Boddy M. The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers. Elife. 11. PMID 36373674 DOI: 10.7554/eLife.79676  0.239
2010 Wu E, Thivierge C, Flamand M, Mathonnet G, Vashisht AA, Wohlschlegel J, Fabian MR, Sonenberg N, Duchaine TF. Pervasive and cooperative deadenylation of 3'UTRs by embryonic microRNA families. Molecular Cell. 40: 558-70. PMID 21095586 DOI: 10.1016/J.Molcel.2010.11.003  0.233
2023 Wang M, Zhong Z, Gallego-Bartolomé J, Li Z, Feng S, Kuo HY, Kan RL, Lam H, Richey JC, Tang L, Zhou J, Liu M, Jami-Alahmadi Y, Wohlschlegel J, Jacobsen SE. A gene silencing screen uncovers diverse tools for targeted gene repression in Arabidopsis. Nature Plants. PMID 36879017 DOI: 10.1038/s41477-023-01362-8  0.231
2019 Mota CM, Oliveira ACM, Davoli-Ferreira M, Silva MV, Santiago FM, Nadipuram SM, Vashisht AA, Wohlschlegel JA, Bradley PJ, Silva JS, Mineo JR, Mineo TWP. Corrigendum: Activates p38 MAPK as an Evasion Mechanism against Innate Immunity. Frontiers in Microbiology. 10: 548. PMID 30972042 DOI: 10.3389/Fmicb.2019.00548  0.231
2019 Majumdar S, Pagano L, Wohlschlegel JA, Villani M, Zappettini A, White JC, Keller AA. Proteomic, gene and metabolite characterization reveal the uptake and toxicity mechanisms of cadmium sulfide quantum dots in soybean plants Environmental Science: Nano. 6: 3010-3026. DOI: 10.1039/C9En00599D  0.23
2021 Xue Y, Zhong Z, Harris CJ, Gallego-Bartolomé J, Wang M, Picard C, Cao X, Hua S, Kwok I, Feng S, Jami-Alahmadi Y, Sha J, Gardiner J, Wohlschlegel J, Jacobsen SE. Arabidopsis MORC proteins function in the efficient establishment of RNA directed DNA methylation. Nature Communications. 12: 4292. PMID 34257299 DOI: 10.1038/s41467-021-24553-3  0.23
2022 Yang E, Huang S, Jami-Alahmadi Y, McInerney GM, Wohlschlegel JA, Li MMH. Elucidation of TRIM25 ubiquitination targets involved in diverse cellular and antiviral processes. Plos Pathogens. 18: e1010743. PMID 36067236 DOI: 10.1371/journal.ppat.1010743  0.229
2022 Potok ME, Zhong Z, Picard CL, Liu Q, Do T, Jacobsen CE, Sakr O, Naranbaatar B, Thilakaratne R, Khnkoyan Z, Purl M, Cheng H, Vervaet H, Feng S, Rayatpisheh S, ... Wohlschlegel JA, et al. The role of ATXR6 expression in modulating genome stability and transposable element repression in . Proceedings of the National Academy of Sciences of the United States of America. 119. PMID 35027454 DOI: 10.1073/pnas.2115570119  0.229
2016 Melber A, Na U, Vashisht A, Weiler BD, Lill R, Wohlschlegel JA, Winge DR. Author response: Role of Nfu1 and Bol3 in iron-sulfur cluster transfer to mitochondrial clients Elife. DOI: 10.7554/Elife.15991.018  0.226
2023 Li Z, Wang M, Zhong Z, Gallego-Bartolom J, Feng S, Jami-Alahmadi Y, Wang X, Wohlschlegel J, Bischof S, Long JA, Jacobsen SE. The MOM1 complex recruits the RdDM machinery via MORC6 to establish DNA methylation. Biorxiv : the Preprint Server For Biology. PMID 36711532 DOI: 10.1101/2023.01.10.523455  0.223
2021 Young BD, Sha J, Vashisht AA, Wohlschlegel JA. Human Multisubunit E3 Ubiquitin Ligase Required for Heterotrimeric G-Protein β-Subunit Ubiquitination and Downstream Signaling. Journal of Proteome Research. PMID 34342229 DOI: 10.1021/acs.jproteome.1c00292  0.223
2021 Chern JH, Pasquarelli RR, Moon AS, Chen AL, Sha J, Wohlschlegel JA, Bradley PJ. A Novel Inner Membrane Complex Suture-Associated Protein Regulates Suture Protein Targeting and Colocalizes with Membrane Trafficking Machinery. Mbio. e0245521. PMID 34634933 DOI: 10.1128/mBio.02455-21  0.223
2022 Yang R, Meyer AS, Droujinine IA, Udeshi ND, Hu Y, Guo J, McMahon JA, Carey DK, Xu C, Fang Q, Sha J, Qin S, Rocco D, Wohlschlegel J, Ting AY, et al. A genetic model for proximity labelling of the mammalian secretome. Open Biology. 12: 220149. PMID 35946312 DOI: 10.1098/rsob.220149  0.222
2022 Zhong Z, Wang Y, Wang M, Yang F, Thomas QA, Xue Y, Zhang Y, Liu W, Jami-Alahmadi Y, Xu L, Feng S, Marquardt S, Wohlschlegel JA, Ausin I, Jacobsen SE. Histone chaperone ASF1 mediates H3.3-H4 deposition in Arabidopsis. Nature Communications. 13: 6970. PMID 36379930 DOI: 10.1038/s41467-022-34648-0  0.22
2019 Hu X, Weston TA, He C, Jung RS, Heizer PJ, Young BD, Tu Y, Tontonoz P, Wohlschlegel JA, Jiang H, Young SG, Fong LG. Release of cholesterol-rich particles from the macrophage plasma membrane during movement of filopodia and lamellipodia. Elife. 8. PMID 31486771 DOI: 10.7554/Elife.50231  0.22
2023 Shimogawa MM, Wijono AS, Wang H, Zhang J, Sha J, Szombathy N, Vadakkan S, Pelayo P, Jonnalagadda K, Wohlschlegel J, Zhou ZH, Hill KL. FAP106 is an interaction hub for assembling microtubule inner proteins at the cilium inner junction. Nature Communications. 14: 5225. PMID 37633952 DOI: 10.1038/s41467-023-40230-z  0.219
2023 Li Z, Wang M, Zhong Z, Gallego-Bartolomé J, Feng S, Jami-Alahmadi Y, Wang X, Wohlschlegel J, Bischof S, Long JA, Jacobsen SE. The MOM1 complex recruits the RdDM machinery via MORC6 to establish de novo DNA methylation. Nature Communications. 14: 4135. PMID 37438334 DOI: 10.1038/s41467-023-39751-4  0.218
2021 Vélez-Ramírez DE, Shimogawa MM, Ray SS, Lopez A, Rayatpisheh S, Langousis G, Gallagher-Jones M, Dean S, Wohlschlegel JA, Hill KL. APEX2 Proximity Proteomics Resolves Flagellum Subdomains and Identifies Flagellum Tip-Specific Proteins in Trypanosoma brucei. Msphere. 6. PMID 33568455 DOI: 10.1128/mSphere.01090-20  0.215
2021 Herbst WA, Deng W, Wohlschlegel JA, Achiro JM, Martin KC. Neuronal activity regulates the nuclear proteome to promote activity-dependent transcription. The Journal of Cell Biology. 220. PMID 34617965 DOI: 10.1083/jcb.202103087  0.213
2023 Pandey V, Mayank AK, Wohlschlegel JA. Analyzing Iron and Oxygen-Regulated Protein Complex Formation Using Proteomic Mass Spectrometry. Methods in Molecular Biology (Clifton, N.J.). 2648: 155-166. PMID 37039990 DOI: 10.1007/978-1-0716-3080-8_10  0.209
2024 Fierro MA, Muheljic A, Sha J, Wohlschlegel J, Beck JR. PEXEL is a proteolytic maturation site for both exported and non-exported proteins. Msphere. e0039323. PMID 38334391 DOI: 10.1128/msphere.00393-23  0.208
2023 Obi CD, Dailey HA, Jami-Alahmadi Y, Wohlschlegel JA, Medlock AE. Proteomic Analysis of Ferrochelatase Interactome in Erythroid and Non-Erythroid Cells. Life (Basel, Switzerland). 13. PMID 36836934 DOI: 10.3390/life13020577  0.206
2018 Nievas YR, Vashisht AA, Corvi MM, Metz S, Johnson PJ, Wohlschlegel JA, de Miguel N. Protein Palmitoylation Plays an Important Role in Trichomonas vaginalis Adherence. Molecular & Cellular Proteomics : McP. 17: 2229-2241. PMID 33503772 DOI: 10.1074/mcp.RA117.000018  0.206
2023 Soto JS, Jami-Alahmadi Y, Wohlschlegel JA, Khakh BS. In vivo identification of astrocyte and neuron subproteomes by proximity-dependent biotinylation. Nature Protocols. PMID 38062165 DOI: 10.1038/s41596-023-00923-7  0.204
2023 Felgines L, Rymen B, Martins LM, Xu G, Matteoli C, Himber C, Zhou M, Eis J, Coruh C, Böhrer M, Kuhn L, Chicher J, Pandey V, Hammann P, Wohlschlegel J, et al. CLSY docking to Pol IV requires a conserved domain critical for small RNA biogenesis and transposon silencing. Biorxiv : the Preprint Server For Biology. PMID 38234754 DOI: 10.1101/2023.12.26.573199  0.204
2023 Fierro MA, Muheljic A, Sha J, Wohlschlegel JA, Beck JR. PEXEL is a proteolytic maturation site for both exported and non-exported proteins. Biorxiv : the Preprint Server For Biology. PMID 37503245 DOI: 10.1101/2023.07.12.548774  0.203
2023 Brunner A, Li Q, Fisicaro S, Kourtesakis A, Viiliäinen J, Johansson HJ, Pandey V, Mayank AK, Lehtiö J, Wohlschlegel JA, Spruck C, Rantala JK, Orre LM, Sangfelt O. FBXL12 degrades FANCD2 to regulate replication recovery and promote cancer cell survival under conditions of replication stress. Molecular Cell. PMID 37591242 DOI: 10.1016/j.molcel.2023.07.026  0.203
2020 Nie M, Oravcová M, Jami-Alahmadi Y, Wohlschlegel JA, Lazzerini-Denchi E, Boddy MN. FAM111A induces nuclear dysfunction in disease and viral restriction. Embo Reports. e50803. PMID 33369867 DOI: 10.15252/embr.202050803  0.202
2022 Hernández-García J, Diego-Martin B, Kuo PH, Jami-Alahmadi Y, Vashisht AA, Wohlschlegel J, Jacobsen SE, Blázquez MA, Gallego-Bartolomé J. Comprehensive identification of SWI/SNF complex subunits underpins deep eukaryotic ancestry and reveals new plant components. Communications Biology. 5: 549. PMID 35668117 DOI: 10.1038/s42003-022-03490-x  0.201
2022 Aguilera KY, Le T, Riahi R, Lay AR, Hinz S, Saadat EA, Vashisht AA, Wohlschlegel J, Donahue TR, Radu CG, Dawson DW. Porcupine inhibition disrupts mitochondrial function and homeostasis in WNT ligand-addicted pancreatic cancer. Molecular Cancer Therapeutics. PMID 35313331 DOI: 10.1158/1535-7163.MCT-21-0623  0.195
2019 Hu X, Weston TA, He C, Jung RS, Heizer PJ, Young BD, Tu Y, Tontonoz P, Wohlschlegel JA, Jiang H, Young SG, Fong LG. Author response: Release of cholesterol-rich particles from the macrophage plasma membrane during movement of filopodia and lamellipodia Elife. DOI: 10.7554/Elife.50231.052  0.193
2023 Afshar Y, Ma F, Quach A, Jeong A, Sunshine HL, Freitas V, Jami-Alahmadi Y, Helaers R, Li X, Pellegrini M, Wohlschlegel JA, Romanoski CE, Vikkula M, Iruela-Arispe ML. Transcriptional drifts associated with environmental changes in endothelial cells. Elife. 12. PMID 36971339 DOI: 10.7554/eLife.81370  0.19
2021 Salas N, Coceres VM, Melo TDS, Pereira-Neves A, Maguire VG, Rodriguez TM, Sabatke B, Ramirez MI, Sha J, Wohlschlegel JA, de Miguel N. VPS32, a member of the ESCRT complex, modulates adherence to host cells in the parasite Trichomonas vaginalis by affecting biogenesis and cargo sorting of released extracellular vesicles. Cellular and Molecular Life Sciences : Cmls. 79: 11. PMID 34951683 DOI: 10.1007/s00018-021-04083-3  0.188
2021 Martelly W, Fellows B, Kang P, Vashisht A, Wohlschlegel JA, Sharma S. Synergistic roles for human U1 snRNA stem-loops in pre-mRNA splicing. Rna Biology. 1-18. PMID 34105434 DOI: 10.1080/15476286.2021.1932360  0.185
2021 Dietz JV, Willoughby MM, Piel RB, Ross TA, Bohovych I, Addis HG, Fox JL, Lanzilotta WN, Dailey HA, Wohlschlegel JA, Reddi AR, Medlock AE, Khalimonchuk O. Mitochondrial contact site and cristae organizing system (MICOS) machinery supports heme biosynthesis by enabling optimal performance of ferrochelatase. Redox Biology. 46: 102125. PMID 34517185 DOI: 10.1016/j.redox.2021.102125  0.18
2023 Thind AC, Mota CM, Gonçalves APN, Sha J, Wohlschlegel JA, Mineo TWP, Bradley PJ. The effector GRA83 modulates the host's innate immune response to regulate parasite infection. Biorxiv : the Preprint Server For Biology. PMID 37398161 DOI: 10.1101/2023.05.31.543158  0.179
2016 Wu E, Vashisht AA, Chapat C, Flamand MN, Cohen E, Sarov M, Tabach Y, Sonenberg N, Wohlschlegel J, Duchaine TF. A continuum of mRNP complexes in embryonic microRNA-mediated silencing. Nucleic Acids Research. PMID 27701073 DOI: 10.1093/nar/gkw872  0.179
2021 Wendimu M, Alqinyah M, Vella S, Dean P, Almutairi F, Rivera RD, Rayatpisheh S, Wohlschlegel J, Moreno S, Hooks SB. RGS10 physically and functionally interacts with STIM2 and requires store-operated calcium entry to regulate proinflammatory gene expression in microglia. Cellular Signalling. 109974. PMID 33705894 DOI: 10.1016/j.cellsig.2021.109974  0.178
2023 Yao Z, Ramachandran S, Huang S, Jami-Alahmadi Y, Wohlschlegel JA, Li MMH. Chikungunya virus glycoproteins transform macrophages into productive viral dissemination vessels. Biorxiv : the Preprint Server For Biology. PMID 37398144 DOI: 10.1101/2023.05.29.542714  0.176
2022 Qian K, Tol MJ, Wu J, Uchiyama LF, Xiao X, Cui L, Bedard AH, Weston TA, Rajendran PS, Vergnes L, Shimanaka Y, Yin Y, Jami-Alahmadi Y, Cohn W, Bajar BT, ... ... Wohlschlegel JA, et al. CLSTN3β enforces adipocyte multilocularity to facilitate lipid utilization. Nature. PMID 36477540 DOI: 10.1038/s41586-022-05507-1  0.176
2020 Colozza G, Jami-Alahmadi Y, Dsouza A, Tejeda-Muñoz N, Albrecht LV, Sosa EA, Wohlschlegel JA, De Robertis EM. Wnt-inducible Lrp6-APEX2 interacting proteins identify ESCRT machinery and Trk-fused gene as components of the Wnt signaling pathway. Scientific Reports. 10: 21555. PMID 33299006 DOI: 10.1038/s41598-020-78019-5  0.175
2021 Wang H, Chan TW, Vashisht AA, Drew BG, Calkin AC, Harris TE, Wohlschlegel JA, Xiao X, Reue K. Lipin 1 modulates mRNA splicing during fasting adaptation in liver. Jci Insight. 6. PMID 34494556 DOI: 10.1172/jci.insight.150114  0.168
2021 Falekun S, Sepulveda J, Jami-Alahmadi Y, Park H, Wohlschlegel JA, Sigala PA. Divergent acyl carrier protein decouples mitochondrial Fe-S cluster biogenesis from fatty acid synthesis in malaria parasites. Elife. 10. PMID 34612205 DOI: 10.7554/eLife.71636  0.166
2023 Ta L, Tsai BL, Deng W, Sha J, Varuzhanyan G, Tran W, Wohlschlegel JA, Carr-Ascher JR, Witte ON. Wild-type C-Raf gene dosage and dimerization drive prostate cancer metastasis. Iscience. 26: 108480. PMID 38089570 DOI: 10.1016/j.isci.2023.108480  0.166
1996 Garza AG, Biran R, Wohlschlegel JA, Manson MD. Mutations in motB suppressible by changes in stator or rotor components of the bacterial flagellar motor Journal of Molecular Biology. 258: 270-285. PMID 8627625 DOI: 10.1006/Jmbi.1996.0249  0.164
2022 Muntean BS, Marwari S, Li X, Sloan DC, Young BD, Wohlschlegel JA, Martemyanov KA. Members of the KCTD family are major regulators of cAMP signaling. Proceedings of the National Academy of Sciences of the United States of America. 119. PMID 34934014 DOI: 10.1073/pnas.2119237119  0.162
2023 Thind AC, Mota CM, Gonçalves APN, Sha J, Wohlschlegel JA, Mineo TWP, Bradley PJ. The effector GRA83 modulates the host's innate immune response to regulate parasite infection. Msphere. e0026323. PMID 37768053 DOI: 10.1128/msphere.00263-23  0.162
2002 Wohlschlegel JA, Dutta A, Dhar SK. Origin recognition complex and the initiation of DNA replication Chemtracts. 15: 533-543.  0.161
2021 Chen Y, Hu X, Liu S, Su T, Huang H, Ren H, Gao Z, Wang X, Lin D, Wohlschlegel JA, Wang Q, Lin C. Regulation of Arabidopsis photoreceptor CRY2 by two distinct E3 ubiquitin ligases. Nature Communications. 12: 2155. PMID 33846325 DOI: 10.1038/s41467-021-22410-x  0.159
2006 Pebernard S, Wohlschlegel J, McDonald WH, Yates JR, Boddy MN. The Nse5-Nse6 Dimer Mediates DNA Repair Roles of the Smc5-Smc6 Complex Molecular and Cellular Biology. 26: 3336-3336. DOI: 10.1128/mcb.26.8.3336.2006  0.158
2023 Sanfilippo P, Kim AJ, Bhukel A, Yoo J, Mirshahidi PS, Pandey V, Bevir H, Yuen A, Mirshahidi PS, Guo P, Li HS, Wohlschlegel JA, Aso Y, Lawrence Zipursky S. Mapping of multiple neurotransmitter receptor subtypes and distinct protein complexes to the connectome. Biorxiv : the Preprint Server For Biology. PMID 37873314 DOI: 10.1101/2023.10.02.560011  0.157
2024 Sanfilippo P, Kim AJ, Bhukel A, Yoo J, Mirshahidi PS, Pandey V, Bevir H, Yuen A, Mirshahidi PS, Guo P, Li HS, Wohlschlegel JA, Aso Y, Zipursky SL. Mapping of multiple neurotransmitter receptor subtypes and distinct protein complexes to the connectome. Neuron. PMID 38262414 DOI: 10.1016/j.neuron.2023.12.014  0.156
2023 Espino-Sanchez TJ, Wienkers H, Marvin RG, Nalder SA, Garc A-Guerrero AE, VanNatta PE, Jami-Alahmadi Y, Blackwell AM, Whitby FG, Wohlschlegel JA, Kieber-Emmons MT, Hill CP, Sigala PA. Direct Tests of Cytochrome Function in the Electron Transport Chain of Malaria Parasites. Biorxiv : the Preprint Server For Biology. PMID 36747727 DOI: 10.1101/2023.01.23.525242  0.154
2023 Espino-Sanchez TJ, Wienkers H, Marvin RG, Nalder SA, García-Guerrero AE, VanNatta PE, Jami-Alahmadi Y, Mixon Blackwell A, Whitby FG, Wohlschlegel JA, Kieber-Emmons MT, Hill CP, Sigala PA. Direct tests of cytochrome and functions in the electron transport chain of malaria parasites. Proceedings of the National Academy of Sciences of the United States of America. 120: e2301047120. PMID 37126705 DOI: 10.1073/pnas.2301047120  0.154
2023 Gangwani MR, Soto JS, Jami-Alahmadi Y, Tiwari S, Kawaguchi R, Wohlschlegel JA, Khakh BS. Neuronal and astrocytic contributions to Huntington's disease dissected with zinc finger protein transcriptional repressors. Cell Reports. 42: 111953. PMID 36640336 DOI: 10.1016/j.celrep.2022.111953  0.151
2021 Mayya VK, Flamand MN, Lambert AM, Jafarnejad SM, Wohlschlegel JA, Sonenberg N, Duchaine TF. microRNA-mediated translation repression through GYF-1 and IFE-4 in C. elegans development. Nucleic Acids Research. PMID 33758928 DOI: 10.1093/nar/gkab162  0.141
2015 Shimogawa MM, Saada EA, Vashisht AA, Barshop WD, Wohlschlegel JA, Hill KL. Cell surface proteomics provides insight into stage-specific remodeling of the host-parasite interface in trypanosoma brucei Molecular and Cellular Proteomics. 14: 1977-1988. DOI: 10.1074/mcp.M114.045146  0.127
2022 Mao Z, Nesterenko PA, McLaughlin J, Deng W, Burton Sojo G, Cheng D, Noguchi M, Chour W, DeLucia DC, Finton KA, Qin Y, Obusan MB, Tran W, Wang L, Bangayan NJ, ... ... Wohlschlegel JA, et al. Physical and in silico immunopeptidomic profiling of a cancer antigen prostatic acid phosphatase reveals targets enabling TCR isolation. Proceedings of the National Academy of Sciences of the United States of America. 119: e2203410119. PMID 35878026 DOI: 10.1073/pnas.2203410119  0.126
2008 Olson BL, Hock MB, Ekholm-Reed S, Wohlschlegel JA, Dev KK, Kralli A, Reed SI. SCFCdc4 acts antagonistically to the PGC-1alpha transcriptional coactivator by targeting it for ubiquitin-mediated proteolysis. Genes & Development. 22: 252-64. PMID 18198341 DOI: 10.1101/gad.1624208  0.125
2018 Stehling O, Mascarenhas J, Vashisht AA, Sheftel AD, Niggemeyer B, Rösser R, Pierik AJ, Wohlschlegel JA, Lill R. Human CIA2A-FAM96A and CIA2B-FAM96B Integrate Iron Homeostasis and Maturation of Different Subsets of Cytosolic-Nuclear Iron-Sulfur Proteins. Cell Metabolism. 27: 263. PMID 29320706 DOI: 10.1016/j.cmet.2017.12.009  0.118
2021 Deng W, Sha J, Plath K, Wohlschlegel JA. CMMB (Carboxylate Modified Magnetic Bead) -based isopropanol gradient peptide fractionation (CIF) enables rapid and robust off-line peptide mixture fractionation in bottom-up proteomics. Molecular & Cellular Proteomics : McP. 100039. PMID 33476790 DOI: 10.1074/mcp.RA120.002411  0.114
2023 Salas N, Blasco Pedreros M, Dos Santos Melo T, Maguire VG, Sha J, Wohlschlegel JA, Pereira-Neves A, de Miguel N. Role of cytoneme structures and extracellular vesicles in Trichomonas vaginalis parasite: parasite communication. Elife. 12. PMID 37129369 DOI: 10.7554/eLife.86067  0.113
2022 Hebbar S, Panzade G, Vashisht AA, Wohlschlegel JA, Veksler-Lublinsky I, Zinovyeva AY. Functional identification of microRNA-centered complexes in C. elegans. Scientific Reports. 12: 7133. PMID 35504914 DOI: 10.1038/s41598-022-10771-2  0.113
2023 Soto JS, Jami-Alahmadi Y, Chacon J, Moye SL, Diaz-Castro B, Wohlschlegel JA, Khakh BS. Astrocyte-neuron subproteomes and obsessive-compulsive disorder mechanisms. Nature. PMID 37046092 DOI: 10.1038/s41586-023-05927-7  0.113
2020 Poe AJ, Kulkarni M, Leszczynska A, Tang J, Shah R, Jami-Alahmadi Y, Wang J, Kramerov AA, Wohlschlegel J, Punj V, Ljubimov AV, Saghizadeh M. Integrated Transcriptome and Proteome Analyses Reveal the Regulatory Role of miR-146a in Human Limbal Epithelium via Notch Signaling. Cells. 9. PMID 32993109 DOI: 10.3390/cells9102175  0.106
2015 Jonas SJ, Stieg AZ, Richardson W, Guo S, Powers DN, Wohlschlegel J, Dunn B. Protein adsorption alters hydrophobic surfaces used for suspension culture of pluripotent stem cells Journal of Physical Chemistry Letters. 6: 388-393. DOI: 10.1021/jz502520r  0.092
2023 Wong M, Martinez T, Tran M, Zuvia C, Gadkari A, Omaiye EE, Luo W, McWhirter KJ, Sha J, Kassem A, Wohlschlegel J, Talbot P. A synthetic coolant (WS-23) in disposable electronic cigarettes impairs cytoskeletal function in EpiAirway microtissues exposed at the air liquid interface. Scientific Reports. 13: 16906. PMID 37805554 DOI: 10.1038/s41598-023-43948-4  0.09
2013 Thivierge C, Makil N, Flamand M, Vasale JJ, Mello CC, Wohlschlegel J, Conte D, Duchaine TF. Erratum: Tudor domain ERI-5 tethers an RNA-dependent RNA polymerase to DCR-1 to potentiate endo-RNAi Nature Structural & Molecular Biology. 20: 244-244. DOI: 10.1038/nsmb0213-244d  0.088
2022 Yang Z, Wang Y, Liu S, Deng W, Lomeli SH, Moriceau G, Wohlschlegel J, Piva M, Lo RS. Enhancing PD-L1 Degradation by ITCH during MAPK Inhibitor Therapy Suppresses Acquired Resistance. Cancer Discovery. PMID 35638972 DOI: 10.1158/2159-8290.CD-21-1463  0.087
2016 Kwong PN, Chambers M, Vashisht AA, Turki-Judeh W, Yau TY, Wohlschlegel JA, Courey AJ. The central region of the Drosophila co-repressor Groucho as a regulatory hub. The Journal of Biological Chemistry. 291: 6784. PMID 27016553 DOI: 10.1074/jbc.A115.681171  0.087
2023 Xie Y, Erşan S, Guan X, Wang J, Sha J, Xu S, Wohlschlegel JA, Park JO, Liu C. Unexpected metabolic rewiring of CO fixation in H-mediated materials-biology hybrids. Proceedings of the National Academy of Sciences of the United States of America. 120: e2308373120. PMID 37816063 DOI: 10.1073/pnas.2308373120  0.078
2022 Deng W, Sha J, Xue F, Jami-Alahmadi Y, Plath K, Wohlschlegel J. High-Field Asymmetric Waveform Ion Mobility Spectrometry Interface Enhances Parallel Reaction Monitoring on an Orbitrap Mass Spectrometer. Analytical Chemistry. PMID 36347042 DOI: 10.1021/acs.analchem.2c01287  0.078
2024 Ollivier M, Soto JS, Linker KE, Moye SL, Jami-Alahmadi Y, Jones AE, Divakaruni AS, Kawaguchi R, Wohlschlegel JA, Khakh BS. Crym-positive striatal astrocytes gate perseverative behaviour. Nature. PMID 38418885 DOI: 10.1038/s41586-024-07138-0  0.078
2021 Jami-Alahmadi Y, Pandey V, Mayank AK, Wohlschlegel JA. A Robust Method for Packing High Resolution C18 RP-nano-HPLC Columns. Journal of Visualized Experiments : Jove. PMID 34057454 DOI: 10.3791/62380  0.073
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