| Year |
Citation |
Score |
| 2023 |
Argentin J, Bolser D, Kersey PJ, Flicek P. Comparative analysis of repeat content in plant genomes, large and small. Frontiers in Plant Science. 14: 1103035. PMID 37521909 DOI: 10.3389/fpls.2023.1103035 |
0.31 |
|
| 2022 |
Kress WJ, Soltis DE, Kersey PJ, Wegrzyn JL, Leebens-Mack JH, Gostel MR, Liu X, Soltis PS. Green plant genomes: What we know in an era of rapidly expanding opportunities. Proceedings of the National Academy of Sciences of the United States of America. 119. PMID 35042803 DOI: 10.1073/pnas.2115640118 |
0.378 |
|
| 2021 |
Skern-Mauritzen R, Malde K, Eichner C, Dondrup M, Furmanek T, Besnier F, Komisarczuk AZ, Nuhn M, Dalvin S, Edvardsen RB, Klages S, Huettel B, Stueber K, Grotmol S, Karlsbakk E, ... Kersey P, et al. The salmon louse genome: Copepod features and parasitic adaptations. Genomics. PMID 34403763 DOI: 10.1016/j.ygeno.2021.08.002 |
0.308 |
|
| 2021 |
Baker WJ, Bailey P, Barber V, Barker A, Bellot S, Bishop D, Botigué LR, Brewer G, Carruthers T, Clarkson JJ, Cook J, Cowan RS, Dodsworth S, Epitawalage N, Françoso E, ... ... Kersey PJ, et al. A Comprehensive Phylogenomic Platform for Exploring the Angiosperm Tree of Life. Systematic Biology. PMID 33983440 DOI: 10.1093/sysbio/syab035 |
0.31 |
|
| 2020 |
Tello-Ruiz MK, Naithani S, Gupta P, Olson A, Wei S, Preece J, Jiao Y, Wang B, Chougule K, Garg P, Elser J, Kumari S, Kumar V, Contreras-Moreira B, Naamati G, ... ... Kersey PJ, et al. Gramene 2021: harnessing the power of comparative genomics and pathways for plant research. Nucleic Acids Research. PMID 33170273 DOI: 10.1093/nar/gkaa979 |
0.354 |
|
| 2020 |
Papoutsoglou EA, Faria D, Arend D, Arnaud E, Athanasiadis IN, Chaves I, Coppens F, Cornut G, Costa BV, Ćwiek-Kupczyńska H, Droesbeke B, Finkers R, Gruden K, Junker A, King GJ, ... ... Kersey PJ, et al. Enabling reusability of plant phenomic datasets with MIAPPE 1.1. The New Phytologist. PMID 32171029 DOI: 10.1111/Nph.16544 |
0.31 |
|
| 2020 |
Shaw F, Etuk A, Minotto A, Gonzalez-Beltran A, Johnson D, Rocca-Serra P, Laporte M, Arnaud E, Devare M, Kersey P, Sansone S, Davey RP. COPO: a metadata platform for brokering FAIR data in the life sciences F1000research. 9: 495. DOI: 10.12688/F1000Research.23889.1 |
0.373 |
|
| 2019 |
Pedro H, Yates AD, Kersey PJ, De Silva NH. Collaborative Annotation Redefines Gene Sets for Crucial Phytopathogens. Frontiers in Microbiology. 10: 2477. PMID 31787936 DOI: 10.3389/fmicb.2019.02477 |
0.323 |
|
| 2019 |
Howe KL, Contreras-Moreira B, De Silva N, Maslen G, Akanni W, Allen J, Alvarez-Jarreta J, Barba M, Bolser DM, Cambell L, Carbajo M, Chakiachvili M, Christensen M, Cummins C, Cuzick A, ... ... Kersey PJ, et al. Ensembl Genomes 2020-enabling non-vertebrate genomic research. Nucleic Acids Research. PMID 31598706 DOI: 10.1093/Nar/Gkz890 |
0.446 |
|
| 2018 |
Kersey PJ. Plant genome sequences: past, present, future. Current Opinion in Plant Biology. 48: 1-8. PMID 30579050 DOI: 10.1016/j.pbi.2018.11.001 |
0.351 |
|
| 2018 |
Morales-Hojas R, Hinsley M, Armean IM, Silk R, Harrup LE, Gonzalez-Uriarte A, Veronesi E, Campbell L, Nayduch D, Saski C, Tabachnick WJ, Kersey P, Carpenter S, Fife M. The genome of the biting midge Culicoides sonorensis and gene expression analyses of vector competence for bluetongue virus. Bmc Genomics. 19: 624. PMID 30134833 DOI: 10.1186/S12864-018-5014-1 |
0.419 |
|
| 2018 |
Bolt BJ, Rodgers FH, Shafie M, Kersey PJ, Berriman M, Howe KL. Using WormBase ParaSite: An Integrated Platform for Exploring Helminth Genomic Data. Methods in Molecular Biology (Clifton, N.J.). 1757: 471-491. PMID 29761467 DOI: 10.1007/978-1-4939-7737-6_15 |
0.385 |
|
| 2018 |
Rastogi A, Maheswari U, Dorrell RG, Vieira FRJ, Maumus F, Kustka A, McCarthy J, Allen AE, Kersey P, Bowler C, Tirichine L. Integrative analysis of large scale transcriptome data draws a comprehensive landscape of Phaeodactylum tricornutum genome and evolutionary origin of diatoms. Scientific Reports. 8: 4834. PMID 29556065 DOI: 10.1038/S41598-018-23106-X |
0.376 |
|
| 2018 |
Krajewski P, Chen D, Cwiek H, van Dijk ADJ, Fiorani F, Kersey P, Klukas C, Lange M, Markiewicz A, Nap JP, van Oeveren J, Pommier C, Scholz U, van Schriek M, Usadel B, et al. Corrigendum: Towards recommendations for metadata and data handling in plant phenotyping. Journal of Experimental Botany. PMID 29471492 DOI: 10.1093/Jxb/Ery006 |
0.342 |
|
| 2018 |
Halewood M, Chiurugwi T, Sackville Hamilton R, Kurtz B, Marden E, Welch E, Michiels F, Mozafari J, Sabran M, Patron N, Kersey P, Bastow R, Dorius S, Dias S, McCouch S, et al. Plant genetic resources for food and agriculture: opportunities and challenges emerging from the science and information technology revolution. The New Phytologist. PMID 29359808 DOI: 10.1111/Nph.14993 |
0.367 |
|
| 2018 |
Bolser DM, Staines DM, Perry E, Kersey PJ. Ensembl Plants: Integrating Tools for Visualizing, Mining, and Analyzing Plant Genomic Data. Methods in Molecular Biology (Clifton, N.J.). 1533: 1-31. PMID 27987162 DOI: 10.1007/978-1-4939-6658-5_1 |
0.426 |
|
| 2018 |
Marschall T, Marz M, Abeel T, Dijkstra L, Dutilh BE, Ghaffaari A, Kersey P, Kloosterman WP, Makinen V, Novak AM, Paten B, Porubsky D, Rivals E, Alkan C, Baaijens JA, et al. Computational pan-genomics: status, promises and challenges. Briefings in Bioinformatics. 19: 118-135. PMID 27769991 DOI: 10.1093/Bib/Bbw089 |
0.44 |
|
| 2017 |
Tello-Ruiz MK, Naithani S, Stein JC, Gupta P, Campbell M, Olson A, Wei S, Preece J, Geniza MJ, Jiao Y, Lee YK, Wang B, Mulvaney J, Chougule K, Elser J, ... ... Kersey PJ, et al. Gramene 2018: unifying comparative genomics and pathway resources for plant research. Nucleic Acids Research. PMID 29165610 DOI: 10.1093/Nar/Gkx1111 |
0.36 |
|
| 2017 |
Kersey PJ, Allen JE, Allot A, Barba M, Boddu S, Bolt BJ, Carvalho-Silva D, Christensen M, Davis P, Grabmueller C, Kumar N, Liu Z, Maurel T, Moore B, McDowall MD, et al. Ensembl Genomes 2018: an integrated omics infrastructure for non-vertebrate species. Nucleic Acids Research. PMID 29092050 DOI: 10.1093/nar/gkx1011 |
0.446 |
|
| 2017 |
Lee RYN, Howe KL, Harris TW, Arnaboldi V, Cain S, Chan J, Chen WJ, Davis P, Gao S, Grove C, Kishore R, Muller HM, Nakamura C, Nuin P, Paulini M, ... ... Kersey P, et al. WormBase 2017: molting into a new stage. Nucleic Acids Research. PMID 29069413 DOI: 10.1093/Nar/Gkx998 |
0.423 |
|
| 2017 |
Beier S, Himmelbach A, Colmsee C, Zhang XQ, Barrero RA, Zhang Q, Li L, Bayer M, Bolser D, Taudien S, Groth M, Felder M, Hastie A, Šimková H, Staňková H, ... ... Kersey P, et al. Construction of a map-based reference genome sequence for barley, Hordeum vulgare L. Scientific Data. 4: 170044. PMID 28448065 DOI: 10.1038/Sdata.2017.44 |
0.376 |
|
| 2017 |
Mascher M, Gundlach H, Himmelbach A, Beier S, Twardziok SO, Wicker T, Radchuk V, Dockter C, Hedley PE, Russell J, Bayer M, Ramsay L, Liu H, Haberer G, Zhang XQ, ... ... Kersey P, et al. A chromosome conformation capture ordered sequence of the barley genome. Nature. 544: 427-433. PMID 28447635 DOI: 10.1038/Nature22043 |
0.396 |
|
| 2017 |
Clavijo BJ, Venturini L, Schudoma C, Accinelli GG, Kaithakottil G, Wright J, Borrill P, Kettleborough G, Heavens D, Chapman H, Lipscombe J, Barker T, Lu FH, McKenzie N, Raats D, ... ... Kersey PJ, et al. An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations. Genome Research. PMID 28420692 DOI: 10.1101/Gr.217117.116 |
0.38 |
|
| 2017 |
Petrov AI, Kay SJE, Kalvari I, Howe KL, Gray KA, Bruford EA, Kersey PJ, Cochrane G, Finn RD, Bateman A, Kozomara A, Griffiths-Jones S, Frankish A, Zwieb CW, et al. RNAcentral: a comprehensive database of non-coding RNA sequences. Nucleic Acids Research. 45: D128-D134. PMID 27794554 DOI: 10.1093/Nar/Gkw1008 |
0.321 |
|
| 2016 |
Gupta P, Naithani S, Tello-Ruiz MK, Chougule K, D'Eustachio P, Fabregat A, Jiao Y, Keays M, Lee YK, Kumari S, Mulvaney J, Olson A, Preece J, Stein J, Wei S, ... ... Kersey P, et al. Gramene Database: Navigating Plant Comparative Genomics Resources. Current Plant Biology. 7: 10-15. PMID 28713666 DOI: 10.1016/J.Cpb.2016.12.005 |
0.465 |
|
| 2016 |
Adam-Blondon AF, Alaux M, Pommier C, Cantu D, Cheng ZM, Cramer GR, Davies C, Delrot S, Deluc L, Di Gaspero G, Grimplet J, Fennell A, Londo JP, Kersey P, Mattivi F, et al. Towards an open grapevine information system. Horticulture Research. 3: 16056. PMID 27917288 DOI: 10.1038/Hortres.2016.56 |
0.437 |
|
| 2016 |
Howe KL, Bolt BJ, Shafie M, Kersey P, Berriman M. WormBase ParaSite - a comprehensive resource for helminth genomics. Molecular and Biochemical Parasitology. PMID 27899279 DOI: 10.1016/J.Molbiopara.2016.11.005 |
0.486 |
|
| 2016 |
Spannagl M, Alaux M, Lange M, Bolser DM, Bader KC, Letellier T, Kimmel E, Flores R, Pommier C, Kerhornou A, Walts B, Nussbaumer T, Grabmuller C, Chen J, Colmsee C, ... ... Kersey PJ, et al. transPLANT Resources for Triticeae Genomic Data. The Plant Genome. 9. PMID 27898761 DOI: 10.3835/Plantgenome2015.06.0038 |
0.362 |
|
| 2016 |
Ćwiek-Kupczyńska H, Altmann T, Arend D, Arnaud E, Chen D, Cornut G, Fiorani F, Frohmberg W, Junker A, Klukas C, Lange M, Mazurek C, Nafissi A, Neveu P, van Oeveren J, ... ... Kersey P, et al. Measures for interoperability of phenotypic data: minimum information requirements and formatting. Plant Methods. 12: 44. PMID 27843484 DOI: 10.1186/S13007-016-0144-4 |
0.394 |
|
| 2016 |
Urban M, King R, Andongabo A, Maheswari U, Pedro H, Kersey P, Hammond-Kosack K. First Draft Genome Sequence of a UK Strain (UK99) of Fusarium culmorum. Genome Announcements. 4. PMID 27634986 DOI: 10.1128/Genomea.00771-16 |
0.382 |
|
| 2016 |
Howe KL, Bolt BJ, Cain S, Chan J, Chen WJ, Davis P, Done J, Down T, Gao S, Grove C, Harris TW, Kishore R, Lee R, Lomax J, Li Y, ... ... Kersey P, et al. WormBase 2016: expanding to enable helminth genomic research. Nucleic Acids Research. 44: D774-80. PMID 26578572 DOI: 10.1093/Nar/Gkv1217 |
0.401 |
|
| 2016 |
Bolser D, Staines DM, Pritchard E, Kersey P. Ensembl Plants: Integrating Tools for Visualizing, Mining, and Analyzing Plant Genomics Data. Methods in Molecular Biology (Clifton, N.J.). 1374: 115-40. PMID 26519403 DOI: 10.1007/978-1-4939-3167-5_6 |
0.439 |
|
| 2016 |
Bolser D, Staines DM, Pritchard E, Kersey P. Ensembl Plants: Integrating Tools for Visualizing, Mining, and Analyzing Plant Genomics Data. Methods in Molecular Biology (Clifton, N.J.). 1374: 115-40. PMID 26519403 DOI: 10.1007/978-1-4939-3167-5_6 |
0.439 |
|
| 2015 |
Kersey PJ, Allen JE, Armean I, Boddu S, Bolt BJ, Carvalho-Silva D, Christensen M, Davis P, Falin LJ, Grabmueller C, Humphrey J, Kerhornou A, Khobova J, Aranganathan NK, Langridge N, et al. Ensembl Genomes 2016: more genomes, more complexity. Nucleic Acids Research. PMID 26578574 DOI: 10.1093/nar/gkv1209 |
0.423 |
|
| 2015 |
Tello-Ruiz MK, Stein J, Wei S, Preece J, Olson A, Naithani S, Amarasinghe V, Dharmawardhana P, Jiao Y, Mulvaney J, Kumari S, Chougule K, Elser J, Wang B, Thomason J, ... ... Kersey PJ, et al. Gramene 2016: comparative plant genomics and pathway resources. Nucleic Acids Research. PMID 26553803 DOI: 10.1093/Nar/Gkv1179 |
0.382 |
|
| 2015 |
Pedro H, Maheswari U, Urban M, Irvine AG, Cuzick A, McDowall MD, Staines DM, Kulesha E, Hammond-Kosack KE, Kersey PJ. PhytoPath: an integrative resource for plant pathogen genomics. Nucleic Acids Research. PMID 26476449 DOI: 10.1093/nar/gkv1052 |
0.406 |
|
| 2015 |
Krajewski P, Chen D, ?wiek H, van Dijk AD, Fiorani F, Kersey P, Klukas C, Lange M, Markiewicz A, Nap JP, van Oeveren J, Pommier C, Scholz U, van Schriek M, Usadel B, et al. Towards recommendations for metadata and data handling in plant phenotyping. Journal of Experimental Botany. PMID 26044092 DOI: 10.1093/Jxb/Erv271 |
0.436 |
|
| 2015 |
McDowall MD, Harris MA, Lock A, Rutherford K, Staines DM, Bähler J, Kersey PJ, Oliver SG, Wood V. PomBase 2015: updates to the fission yeast database. Nucleic Acids Research. 43: D656-61. PMID 25361970 DOI: 10.1093/Nar/Gku1040 |
0.411 |
|
| 2015 |
Etuk A, Shaw F, Gonzalez-Beltran A, Rocca-Serra P, Abdul-Rahman A, Kersey P, Bastow R, Sansone S, Davey R. COPO - Bridging the Gap from Data to Publication in Plant Science F1000research. 5. DOI: 10.7490/F1000Research.1111380.1 |
0.324 |
|
| 2014 |
Fox SE, Geniza M, Hanumappa M, Naithani S, Sullivan C, Preece J, Tiwari VK, Elser J, Leonard JM, Sage A, Gresham C, Kerhornou A, Bolser D, McCarthy F, Kersey P, et al. De novo transcriptome assembly and analyses of gene expression during photomorphogenesis in diploid wheat Triticum monococcum. Plos One. 9: e96855. PMID 24821410 DOI: 10.1371/Journal.Pone.0096855 |
0.396 |
|
| 2014 |
Nayduch D, Cohnstaedt LW, Saski C, Lawson D, Kersey P, Fife M, Carpenter S. Studying Culicoides vectors of BTV in the post-genomic era: resources, bottlenecks to progress and future directions. Virus Research. 182: 43-9. PMID 24355835 DOI: 10.1016/J.Virusres.2013.12.009 |
0.301 |
|
| 2014 |
Monaco MK, Stein J, Naithani S, Wei S, Dharmawardhana P, Kumari S, Amarasinghe V, Youens-Clark K, Thomason J, Preece J, Pasternak S, Olson A, Jiao Y, Lu Z, Bolser D, ... ... Kersey PJ, et al. Gramene 2013: comparative plant genomics resources. Nucleic Acids Research. 42: D1193-9. PMID 24217918 DOI: 10.1093/nar/gkt1110 |
0.421 |
|
| 2014 |
Harris TW, Baran J, Bieri T, Cabunoc A, Chan J, Chen WJ, Davis P, Done J, Grove C, Howe K, Kishore R, Lee R, Li Y, Muller HM, Nakamura C, ... ... Kersey P, et al. WormBase 2014: new views of curated biology. Nucleic Acids Research. 42: D789-93. PMID 24194605 DOI: 10.1093/Nar/Gkt1063 |
0.368 |
|
| 2014 |
Kersey PJ, Allen JE, Christensen M, Davis P, Falin LJ, Grabmueller C, Hughes DS, Humphrey J, Kerhornou A, Khobova J, Langridge N, McDowall MD, Maheswari U, Maslen G, Nuhn M, et al. Ensembl Genomes 2013: scaling up access to genome-wide data. Nucleic Acids Research. 42: D546-52. PMID 24163254 DOI: 10.1093/nar/gkt979 |
0.453 |
|
| 2013 |
Bradnam KR, Fass JN, Alexandrov A, Baranay P, Bechner M, Birol I, Boisvert S, Chapman JA, Chapuis G, Chikhi R, Chitsaz H, Chou WC, Corbeil J, Del Fabbro C, Docking TR, ... ... Kersey PJ, et al. Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species. Gigascience. 2: 10. PMID 23870653 DOI: 10.1186/2047-217X-2-10 |
0.345 |
|
| 2012 |
Howe K, Davis P, Paulini M, Tuli MA, Williams G, Yook K, Durbin R, Kersey P, Sternberg PW. WormBase: Annotating many nematode genomes. Worm. 1: 15-21. PMID 24058818 DOI: 10.4161/worm.19574 |
0.393 |
|
| 2012 |
Brenchley R, Spannagl M, Pfeifer M, Barker GL, D'Amore R, Allen AM, McKenzie N, Kramer M, Kerhornou A, Bolser D, Kay S, Waite D, Trick M, Bancroft I, Gu Y, ... ... Kersey P, et al. Analysis of the bread wheat genome using whole-genome shotgun sequencing. Nature. 491: 705-10. PMID 23192148 DOI: 10.1038/Nature11650 |
0.368 |
|
| 2012 |
Yook K, Harris TW, Bieri T, Cabunoc A, Chan J, Chen WJ, Davis P, de la Cruz N, Duong A, Fang R, Ganesan U, Grove C, Howe K, Kadam S, Kishore R, ... ... Kersey P, et al. WormBase 2012: more genomes, more data, new website. Nucleic Acids Research. 40: D735-41. PMID 22067452 DOI: 10.1093/Nar/Gkr954 |
0.3 |
|
| 2012 |
Kersey PJ, Staines DM, Lawson D, Kulesha E, Derwent P, Humphrey JC, Hughes DS, Keenan S, Kerhornou A, Koscielny G, Langridge N, McDowall MD, Megy K, Maheswari U, Nuhn M, et al. Ensembl Genomes: an integrative resource for genome-scale data from non-vertebrate species. Nucleic Acids Research. 40: D91-7. PMID 22067447 DOI: 10.1093/Nar/Gkr895 |
0.432 |
|
| 2012 |
Wood V, Harris MA, McDowall MD, Rutherford K, Vaughan BW, Staines DM, Aslett M, Lock A, Bähler J, Kersey PJ, Oliver SG. PomBase: a comprehensive online resource for fission yeast. Nucleic Acids Research. 40: D695-9. PMID 22039153 DOI: 10.1093/Nar/Gkr853 |
0.385 |
|
| 2011 |
Bateman A, Agrawal S, Birney E, Bruford EA, Bujnicki JM, Cochrane G, Cole JR, Dinger ME, Enright AJ, Gardner PP, Gautheret D, Griffiths-Jones S, Harrow J, Herrero J, Holmes IH, ... ... Kersey P, et al. RNAcentral: A vision for an international database of RNA sequences. Rna (New York, N.Y.). 17: 1941-6. PMID 21940779 DOI: 10.1261/Rna.2750811 |
0.331 |
|
| 2011 |
Gan X, Stegle O, Behr J, Steffen JG, Drewe P, Hildebrand KL, Lyngsoe R, Schultheiss SJ, Osborne EJ, Sreedharan VT, Kahles A, Bohnert R, Jean G, Derwent P, Kersey P, et al. Multiple reference genomes and transcriptomes for Arabidopsis thaliana. Nature. 477: 419-23. PMID 21874022 DOI: 10.1038/Nature10414 |
0.359 |
|
| 2011 |
Kinsella RJ, Kähäri A, Haider S, Zamora J, Proctor G, Spudich G, Almeida-King J, Staines D, Derwent P, Kerhornou A, Kersey P, Flicek P. Ensembl BioMarts: a hub for data retrieval across taxonomic space. Database : the Journal of Biological Databases and Curation. 2011: bar030. PMID 21785142 DOI: 10.1093/Database/Bar030 |
0.423 |
|
| 2011 |
Youens-Clark K, Buckler E, Casstevens T, Chen C, Declerck G, Derwent P, Dharmawardhana P, Jaiswal P, Kersey P, Karthikeyan AS, Lu J, McCouch SR, Ren L, Spooner W, Stein JC, et al. Gramene database in 2010: updates and extensions. Nucleic Acids Research. 39: D1085-94. PMID 21076153 DOI: 10.1093/Nar/Gkq1148 |
0.421 |
|
| 2010 |
Parkhill J, Birney E, Kersey P. Genomic information infrastructure after the deluge. Genome Biology. 11: 402. PMID 20670392 DOI: 10.1186/Gb-2010-11-7-402 |
0.422 |
|
| 2010 |
Kersey PJ, Lawson D, Birney E, Derwent PS, Haimel M, Herrero J, Keenan S, Kerhornou A, Koscielny G, Kähäri A, Kinsella RJ, Kulesha E, Maheswari U, Megy K, Nuhn M, et al. Ensembl Genomes: extending Ensembl across the taxonomic space. Nucleic Acids Research. 38: D563-9. PMID 19884133 DOI: 10.1093/Nar/Gkp871 |
0.455 |
|
| 2008 |
Mulder NJ, Kersey P, Pruess M, Apweiler R. In silico characterization of proteins: UniProt, InterPro and Integr8. Molecular Biotechnology. 38: 165-77. PMID 18219596 DOI: 10.1007/S12033-007-9003-X |
0.428 |
|
| 2007 |
Sterk P, Kulikova T, Kersey P, Apweiler R. The EMBL Nucleotide Sequence and Genome Reviews Databases. Methods in Molecular Biology (Clifton, N.J.). 406: 1-21. PMID 18287686 DOI: 10.1007/978-1-59745-535-0_1 |
0.38 |
|
| 2006 |
Kersey P, Apweiler R. Linking publication, gene and protein data. Nature Cell Biology. 8: 1183-9. PMID 17060904 DOI: 10.1038/Ncb1495 |
0.353 |
|
| 2006 |
Pruess M, Kersey P, Kulikova T, Apweiler R. Databases and resources for in silico proteome analysis. Methods of Biochemical Analysis. 49: 397-414. PMID 16929689 DOI: 10.1002/0471973165.Ch21 |
0.369 |
|
| 2006 |
Sterk P, Kersey PJ, Apweiler R. Genome Reviews: standardizing content and representation of information about complete genomes. Omics : a Journal of Integrative Biology. 10: 114-8. PMID 16901215 DOI: 10.1089/Omi.2006.10.114 |
0.36 |
|
| 2005 |
Pruess M, Kersey P, Apweiler R. The Integr8 project--a resource for genomic and proteomic data. In Silico Biology. 5: 179-85. PMID 15972013 |
0.349 |
|
| 2005 |
Kersey P, Bower L, Morris L, Horne A, Petryszak R, Kanz C, Kanapin A, Das U, Michoud K, Phan I, Gattiker A, Kulikova T, Faruque N, Duggan K, Mclaren P, et al. Integr8 and Genome Reviews: integrated views of complete genomes and proteomes. Nucleic Acids Research. 33: D297-302. PMID 15608201 DOI: 10.1093/Nar/Gki039 |
0.369 |
|
| 2004 |
Kersey PJ, Duarte J, Williams A, Karavidopoulou Y, Birney E, Apweiler R. The International Protein Index: an integrated database for proteomics experiments. Proteomics. 4: 1985-8. PMID 15221759 DOI: 10.1002/Pmic.200300721 |
0.344 |
|
| 2004 |
Imanishi T, Itoh T, Suzuki Y, O'Donovan C, Fukuchi S, Koyanagi KO, Barrero RA, Tamura T, Yamaguchi-Kabata Y, Tanino M, Yura K, Miyazaki S, Ikeo K, Homma K, Kasprzyk A, ... ... Kersey P, et al. Integrative annotation of 21,037 human genes validated by full-length cDNA clones. Plos Biology. 2: e162. PMID 15103394 DOI: 10.1371/Journal.Pbio.0020162 |
0.355 |
|
| 2004 |
Hermjakob H, Montecchi-Palazzi L, Bader G, Wojcik J, Salwinski L, Ceol A, Moore S, Orchard S, Sarkans U, von Mering C, Roechert B, Poux S, Jung E, Mersch H, Kersey P, et al. The HUPO PSI's molecular interaction format--a community standard for the representation of protein interaction data. Nature Biotechnology. 22: 177-83. PMID 14755292 DOI: 10.1038/Nbt926 |
0.343 |
|
| 2003 |
Orchard S, Kersey P, Zhu W, Montecchi-Palazzi L, Hermjakob H, Apweiler R. Progress in Establishing Common Standards for Exchanging Proteomics Data: The Second Meeting of the HUPO Proteomics Standards Initiative. Comparative and Functional Genomics. 4: 203-6. PMID 18629121 DOI: 10.1002/Cfg.279 |
0.357 |
|
| 2003 |
Orchard S, Kersey P, Hermjakob H, Apweiler R. The HUPO Proteomics Standards Initiative Meeting: Towards Common Standards for Exchanging Proteomics Data. Comparative and Functional Genomics. 4: 16-9. PMID 18629102 DOI: 10.1002/Cfg.232 |
0.362 |
|
| 2003 |
Gattiker A, Michoud K, Rivoire C, Auchincloss AH, Coudert E, Lima T, Kersey P, Pagni M, Sigrist CJ, Lachaize C, Veuthey AL, Gasteiger E, Bairoch A. Automated annotation of microbial proteomes in SWISS-PROT. Computational Biology and Chemistry. 27: 49-58. PMID 12798039 DOI: 10.1016/S1476-9271(02)00094-4 |
0.42 |
|
| 2003 |
Camon E, Magrane M, Barrell D, Binns D, Fleischmann W, Kersey P, Mulder N, Oinn T, Maslen J, Cox A, Apweiler R. The Gene Ontology Annotation (GOA) project: implementation of GO in SWISS-PROT, TrEMBL, and InterPro. Genome Research. 13: 662-72. PMID 12654719 DOI: 10.1101/Gr.461403 |
0.422 |
|
| 2003 |
Pruess M, Fleischmann W, Kanapin A, Karavidopoulou Y, Kersey P, Kriventseva E, Mittard V, Mulder N, Phan I, Servant F, Apweiler R. The Proteome Analysis database: a tool for the in silico analysis of whole proteomes. Nucleic Acids Research. 31: 414-7. PMID 12520037 DOI: 10.1093/Nar/Gkg105 |
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| 2002 |
Biswas M, O'Rourke JF, Camon E, Fraser G, Kanapin A, Karavidopoulou Y, Kersey P, Kriventseva E, Mittard V, Mulder N, Phan I, Servant F, Apweiler R. Applications of InterPro in protein annotation and genome analysis. Briefings in Bioinformatics. 3: 285-95. PMID 12230037 DOI: 10.1093/Bib/3.3.285 |
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| 2002 |
Kanapin A, Apweiler R, Biswas M, Fleischmann W, Karavidopoulou Y, Kersey P, Kriventseva EV, Mittard V, Mulder N, Oinn T, Phan I, Servant F, Zdobnov E. Interactive InterPro-based comparisons of proteins in whole genomes. Bioinformatics (Oxford, England). 18: 374-5. PMID 11847096 DOI: 10.1093/Bioinformatics/18.2.374 |
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Apweiler R, Biswas M, Fleischmann W, Kanapin A, Karavidopoulou Y, Kersey P, Kriventseva EV, Mittard V, Mulder N, Phan I, Zdobnov E. Proteome Analysis Database: online application of InterPro and CluSTr for the functional classification of proteins in whole genomes. Nucleic Acids Research. 29: 44-8. PMID 11125045 DOI: 10.1093/Nar/29.1.44 |
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