| Year |
Citation |
Score |
| 2024 |
Woodruff AL, Berman J, Anderson M. Strain background of interacts with to alter phenotypic switching. Microbiology (Reading, England). 170. PMID 38446018 DOI: 10.1099/mic.0.001444 |
0.794 |
|
| 2021 |
Yang F, Todd RT, Selmecki A, Jiang YY, Cao YB, Berman J. The fitness costs and benefits of trisomy of each Candida albicans chromosome. Genetics. PMID 33837402 DOI: 10.1093/genetics/iyab056 |
0.709 |
|
| 2020 |
Gale AN, Sakhawala RM, Levitan A, Sharan R, Berman J, Timp W, Cunningham KW. Identification of Essential Genes and Fluconazole Susceptibility Genes in by Profiling Transposon Insertions. G3 (Bethesda, Md.). PMID 32819971 DOI: 10.1534/G3.120.401595 |
0.386 |
|
| 2020 |
Tits J, Cools F, De Cremer K, De Brucker K, Berman J, Verbruggen K, Gevaert B, Cos P, Cammue BPA, Thevissen K. Combination of miconazole and domiphen bromide is fungicidal against biofilms of resistant spp. Antimicrobial Agents and Chemotherapy. PMID 32690639 DOI: 10.1128/Aac.01296-20 |
0.302 |
|
| 2020 |
Levitan A, Gale AN, Dallon EK, Kozan DW, Cunningham KW, Sharan R, Berman J. Comparing the utility of in vivo transposon mutagenesis approaches in yeast species to infer gene essentiality. Current Genetics. PMID 32681306 DOI: 10.1007/S00294-020-01096-6 |
0.352 |
|
| 2019 |
Price RJ, Weindling E, Berman J, Buscaino A. Chromatin Profiling of the Repetitive and Nonrepetitive Genomes of the Human Fungal Pathogen Candida albicans. Mbio. 10. PMID 31337722 DOI: 10.1128/Mbio.01376-19 |
0.342 |
|
| 2019 |
Forche A, Solis NV, Swidergall M, Thomas R, Guyer A, Beach A, Cromie GA, Le GT, Lowell E, Pavelka N, Berman J, Dudley AM, Selmecki A, Filler SG. Selection of Candida albicans trisomy during oropharyngeal infection results in a commensal-like phenotype. Plos Genetics. 15: e1008137. PMID 31091232 DOI: 10.1371/Journal.Pgen.1008137 |
0.735 |
|
| 2019 |
Yang F, Teoh F, Tan ASM, Cao Y, Pavelka N, Berman J. Aneuploidy enables cross-adaptation to unrelated drugs. Molecular Biology and Evolution. PMID 31028698 DOI: 10.1093/Molbev/Msz104 |
0.383 |
|
| 2019 |
Bijlani S, Thevandavakkam MA, Tsai HJ, Berman J. Autonomously Replicating Linear Plasmids That Facilitate the Analysis of Replication Origin Function in . Msphere. 4. PMID 30842269 DOI: 10.1128/mSphere.00103-19 |
0.592 |
|
| 2019 |
Stone NR, Rhodes J, Fisher MC, Mfinanga S, Kivuyo S, Rugemalila J, Segal ES, Needleman L, Molloy SF, Kwon-Chung J, Harrison TS, Hope W, Berman J, Bicanic T. Dynamic ploidy changes drive fluconazole resistance in human cryptococcal meningitis. The Journal of Clinical Investigation. PMID 30688656 DOI: 10.1172/Jci124516 |
0.307 |
|
| 2018 |
Segal ES, Gritsenko V, Levitan A, Yadav B, Dror N, Steenwyk JL, Silberberg Y, Mielich K, Rokas A, Gow NAR, Kunze R, Sharan R, Berman J. Gene Essentiality Analyzed by Transposon Mutagenesis and Machine Learning in a Stable Haploid Isolate of . Mbio. 9. PMID 30377286 DOI: 10.1128/Mbio.02048-18 |
0.385 |
|
| 2018 |
Uppuluri P, Acosta Zaldívar M, Anderson MZ, Dunn MJ, Berman J, Lopez Ribot JL, Köhler JR. Dispersed Cells Are Developmentally Distinct from Biofilm and Planktonic Cells. Mbio. 9. PMID 30131358 DOI: 10.1128/Mbio.01338-18 |
0.772 |
|
| 2018 |
Rosenberg A, Ene IV, Bibi M, Zakin S, Segal ES, Ziv N, Dahan AM, Colombo AL, Bennett RJ, Berman J. Antifungal tolerance is a subpopulation effect distinct from resistance and is associated with persistent candidemia. Nature Communications. 9: 2470. PMID 29941885 DOI: 10.1038/S41467-018-04926-X |
0.575 |
|
| 2018 |
Forche A, Cromie G, Gerstein AC, Solis NV, Pisithkul T, Srifa W, Jeffery E, Abbey D, Filler SG, Dudley AM, Berman J. Rapid Phenotypic and Genotypic Diversification After Exposure to the Oral Host Niche in . Genetics. PMID 29724862 DOI: 10.1534/Genetics.118.301019 |
0.354 |
|
| 2018 |
Dunn MJ, Kinney GM, Washington PM, Berman J, Anderson MZ. Functional diversification accompanies gene family expansion of MED2 homologs in Candida albicans. Plos Genetics. 14: e1007326. PMID 29630599 DOI: 10.1371/Journal.Pgen.1007326 |
0.771 |
|
| 2018 |
Mielich K, Shtifman-Segal E, Golz JC, Zeng G, Wang Y, Berman J, Kunze R. Maize Transposable Elements Ac/Ds as Insertion Mutagenesis Tools in Candida albicans. G3 (Bethesda, Md.). PMID 29378819 DOI: 10.1534/G3.117.300388 |
0.392 |
|
| 2017 |
Mandelblat M, Frenkel M, Abbey D, Ben Ami R, Berman J, Segal E. Phenotypic and genotypic characteristics of Candida albicans isolates from bloodstream and mucosal infections. Mycoses. PMID 28543785 DOI: 10.1111/Myc.12623 |
0.369 |
|
| 2017 |
Gonia S, Berman J, Gale CA. Generation of Fluorescent Protein Fusions in Candida Species. Journal of Visualized Experiments : Jove. PMID 28287596 DOI: 10.3791/55333 |
0.343 |
|
| 2017 |
Gerstein AC, Lim H, Berman J, Hickman MA. Ploidy tug-of-war: evolutionary and genetic environments influence the rate of ploidy drive in a human fungal pathogen. Evolution; International Journal of Organic Evolution. PMID 28195309 DOI: 10.1111/Evo.13205 |
0.344 |
|
| 2017 |
Berman J, Forche A. Haplotyping a Non-meiotic Diploid Fungal Pathogen Using Induced Aneuploidies and SNP/CGH Microarray Analysis. Methods in Molecular Biology (Clifton, N.J.). 1551: 131-146. PMID 28138844 DOI: 10.1007/978-1-4939-6750-6_7 |
0.332 |
|
| 2017 |
Ben-Ami R, Berman J, Novikov A, Bash E, Shachor-Meyouhas Y, Zakin S, Maor Y, Tarabia J, Schechner V, Adler A, Finn T. Multidrug-Resistant Candida haemulonii and C. auris, Tel Aviv, Israel. Emerging Infectious Diseases. 23. PMID 28098529 DOI: 10.3201/Eid2302.161486 |
0.331 |
|
| 2016 |
Wertheimer NB, Stone N, Berman J. Ploidy dynamics and evolvability in fungi. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 371. PMID 28080987 DOI: 10.1098/Rstb.2015.0461 |
0.364 |
|
| 2016 |
Burrack LS, Hutton HF, Matter KJ, Clancey SA, Liachko I, Plemmons AE, Saha A, Power EA, Turman B, Thevandavakkam MA, Ay F, Dunham MJ, Berman J. Neocentromeres Provide Chromosome Segregation Accuracy and Centromere Clustering to Multiple Loci along a Candida albicans Chromosome. Plos Genetics. 12: e1006317. PMID 27662467 DOI: 10.1371/Journal.Pgen.1006317 |
0.39 |
|
| 2016 |
Ben-Ami R, Zimmerman O, Finn T, Amit S, Novikov A, Wertheimer N, Lurie-Weinberger M, Berman J. Heteroresistance to Fluconazole Is a Continuously Distributed Phenotype among Candida glabrata Clinical Strains Associated with In Vivo Persistence. Mbio. 7. PMID 27486188 DOI: 10.1128/Mbio.00655-16 |
0.373 |
|
| 2016 |
Freire-Benéitez V, Gourlay S, Berman J, Buscaino A. Sir2 regulates stability of repetitive domains differentially in the human fungal pathogen Candida albicans. Nucleic Acids Research. PMID 27369382 DOI: 10.1093/Nar/Gkw594 |
0.382 |
|
| 2016 |
Ciudad T, Hickman M, Bellido A, Berman J, Larriba G. The Phenotypic Consequences of a Spontaneous Loss of Heterozygosity in a Common Laboratory Strain of Candida Albicans. Genetics. PMID 27206717 DOI: 10.1534/Genetics.116.189274 |
0.377 |
|
| 2016 |
Gerstein AC, Rosenberg A, Hecht I, Berman JG. diskImageR: Quantification of resistance and tolerance to antimicrobial drugs using disk diffusion assays. Microbiology (Reading, England). PMID 27126388 DOI: 10.1099/Mic.0.000295 |
0.314 |
|
| 2016 |
Freire-Benéitez V, Price RJ, Tarrant D, Berman J, Buscaino A. Candida albicans repetitive elements display epigenetic diversity and plasticity. Scientific Reports. 6: 22989. PMID 26971880 DOI: 10.1038/Srep22989 |
0.372 |
|
| 2016 |
Berman J. Ploidy plasticity: a rapid and reversible strategy for adaptation to stress. Fems Yeast Research. PMID 26945893 DOI: 10.1093/Femsyr/Fow020 |
0.41 |
|
| 2016 |
Thomson DD, Berman J, Brand AC. High frame-rate resolution of cell division during Candida albicans filamentation. Fungal Genetics and Biology : Fg & B. PMID 26854071 DOI: 10.1016/J.Fgb.2016.02.001 |
0.371 |
|
| 2015 |
Hickman MA, Zeng G, Forche A, Hirakawa MP, Abbey D, Harrison BD, Wang YM, Su CH, Bennett RJ, Wang Y, Berman J. Corrigendum: The 'obligate diploid' Candida albicans forms mating-competent haploids. Nature. PMID 26580011 DOI: 10.1038/Nature16134 |
0.537 |
|
| 2015 |
Gerstein AC, Fu MS, Mukaremera L, Li Z, Ormerod KL, Fraser JA, Berman J, Nielsen K. Polyploid Titan Cells Produce Haploid and Aneuploid Progeny To Promote Stress Adaptation. Mbio. 6. PMID 26463162 DOI: 10.1128/Mbio.01340-15 |
0.346 |
|
| 2015 |
McCoy KM, Tubman ES, Claas A, Tank D, Clancy SA, O'Toole ET, Berman J, Odde DJ. Physical limits on kinesin-5-mediated chromosome congression in the smallest mitotic spindles. Molecular Biology of the Cell. 26: 3999-4014. PMID 26354423 DOI: 10.1091/Mbc.E14-10-1454 |
0.389 |
|
| 2015 |
Gerstein AC, Berman J. Shift and adapt: the costs and benefits of karyotype variations. Current Opinion in Microbiology. 26: 130-6. PMID 26321163 DOI: 10.1016/J.Mib.2015.06.010 |
0.359 |
|
| 2015 |
Hickman MA, Paulson C, Dudley A, Berman J. Parasexual Ploidy Reduction Drives Population Heterogeneity Through Random and Transient Aneuploidy in Candida albicans. Genetics. 200: 781-94. PMID 25991822 DOI: 10.1534/Genetics.115.178020 |
0.405 |
|
| 2015 |
Anderson MZ, Wigen LJ, Burrack LS, Berman J. Real-Time Evolution of a Subtelomeric Gene Family in Candida albicans. Genetics. PMID 25956943 DOI: 10.1534/Genetics.115.177451 |
0.712 |
|
| 2015 |
Chen G, Mulla WA, Kucharavy A, Tsai HJ, Rubinstein B, Conkright J, McCroskey S, Bradford WD, Weems L, Haug JS, Seidel CW, Berman J, Li R. Targeting the adaptability of heterogeneous aneuploids. Cell. 160: 771-84. PMID 25679766 DOI: 10.1016/J.Cell.2015.01.026 |
0.616 |
|
| 2015 |
Sullivan DJ, Berman J, Myers LC, Moran GP. Telomeric ORFS in Candida albicans: does mediator tail wag the yeast? Plos Pathogens. 11: e1004614. PMID 25675446 DOI: 10.1371/Journal.Ppat.1004614 |
0.396 |
|
| 2015 |
Ford CB, Funt JM, Abbey D, Issi L, Guiducci C, Martinez DA, Delorey T, Li BY, White TC, Cuomo C, Rao RP, Berman J, Thompson DA, Regev A. The evolution of drug resistance in clinical isolates of Candida albicans. Elife. 4: e00662. PMID 25646566 DOI: 10.7554/Elife.00662 |
0.339 |
|
| 2015 |
Hirakawa MP, Martinez DA, Sakthikumar S, Anderson MZ, Berlin A, Gujja S, Zeng Q, Zisson E, Wang JM, Greenberg JM, Berman J, Bennett RJ, Cuomo CA. Genetic and phenotypic intra-species variation in Candida albicans. Genome Research. 25: 413-25. PMID 25504520 DOI: 10.1101/Gr.174623.114 |
0.801 |
|
| 2014 |
Abbey DA, Funt J, Lurie-Weinberger MN, Thompson DA, Regev A, Myers CL, Berman J. YMAP: a pipeline for visualization of copy number variation and loss of heterozygosity in eukaryotic pathogens. Genome Medicine. 6: 100. PMID 25505934 DOI: 10.1186/S13073-014-0100-8 |
0.353 |
|
| 2014 |
Haran J, Boyle H, Hokamp K, Yeomans T, Liu Z, Church M, Fleming AB, Anderson MZ, Berman J, Myers LC, Sullivan DJ, Moran GP. Telomeric ORFs (TLOs) in Candida spp. Encode mediator subunits that regulate distinct virulence traits. Plos Genetics. 10: e1004658. PMID 25356803 DOI: 10.1371/Journal.Pgen.1004658 |
0.719 |
|
| 2014 |
Tsai HJ, Baller JA, Liachko I, Koren A, Burrack LS, Hickman MA, Thevandavakkam MA, Rusche LN, Berman J. Origin replication complex binding, nucleosome depletion patterns, and a primary sequence motif can predict origins of replication in a genome with epigenetic centromeres. Mbio. 5: e01703-14. PMID 25182328 DOI: 10.1128/Mbio.01703-14 |
0.631 |
|
| 2014 |
Bennett RJ, Forche A, Berman J. Rapid mechanisms for generating genome diversity: whole ploidy shifts, aneuploidy, and loss of heterozygosity. Cold Spring Harbor Perspectives in Medicine. 4. PMID 25081629 DOI: 10.1101/Cshperspect.A019604 |
0.619 |
|
| 2014 |
Anderson MZ, Gerstein AC, Wigen L, Baller JA, Berman J. Silencing is noisy: population and cell level noise in telomere-adjacent genes is dependent on telomere position and sir2. Plos Genetics. 10: e1004436. PMID 25057900 DOI: 10.1371/Journal.Pgen.1004436 |
0.697 |
|
| 2014 |
Harrison BD, Hashemi J, Bibi M, Pulver R, Bavli D, Nahmias Y, Wellington M, Sapiro G, Berman J. A tetraploid intermediate precedes aneuploid formation in yeasts exposed to fluconazole. Plos Biology. 12: e1001815. PMID 24642609 DOI: 10.1371/Journal.Pbio.1001815 |
0.794 |
|
| 2013 |
Burrack LS, Applen Clancey SE, Chacón JM, Gardner MK, Berman J. Monopolin recruits condensin to organize centromere DNA and repetitive DNA sequences. Molecular Biology of the Cell. 24: 2807-19. PMID 23885115 DOI: 10.1091/Mbc.E13-05-0229 |
0.429 |
|
| 2013 |
Hickman MA, Zeng G, Forche A, Hirakawa MP, Abbey D, Harrison BD, Wang YM, Su CH, Bennett RJ, Wang Y, Berman J. The 'obligate diploid' Candida albicans forms mating-competent haploids. Nature. 494: 55-9. PMID 23364695 DOI: 10.1038/Nature11865 |
0.651 |
|
| 2013 |
Gerami-Nejad M, Zacchi LF, McClellan M, Matter K, Berman J. Shuttle vectors for facile gap repair cloning and integration into a neutral locus in Candida albicans. Microbiology (Reading, England). 159: 565-79. PMID 23306673 DOI: 10.1099/Mic.0.064097-0 |
0.749 |
|
| 2012 |
Anderson MZ, Baller JA, Dulmage K, Wigen L, Berman J. The three clades of the telomere-associated TLO gene family of Candida albicans have different splicing, localization, and expression features. Eukaryotic Cell. 11: 1268-75. PMID 22923044 DOI: 10.1128/Ec.00230-12 |
0.705 |
|
| 2012 |
Shivaraju M, Unruh JR, Slaughter BD, Mattingly M, Berman J, Gerton JL. Cell-cycle-coupled structural oscillation of centromeric nucleosomes in yeast. Cell. 150: 304-16. PMID 22817893 DOI: 10.1016/J.Cell.2012.05.034 |
0.338 |
|
| 2012 |
Gerami-Nejad M, Forche A, McClellan M, Berman J. Analysis of protein function in clinical C. albicans isolates. Yeast (Chichester, England). 29: 303-9. PMID 22777821 DOI: 10.1002/Yea.2910 |
0.372 |
|
| 2012 |
Burrack LS, Berman J. Neocentromeres and epigenetically inherited features of centromeres. Chromosome Research : An International Journal On the Molecular, Supramolecular and Evolutionary Aspects of Chromosome Biology. 20: 607-19. PMID 22723125 DOI: 10.1007/S10577-012-9296-X |
0.386 |
|
| 2012 |
Burrack LS, Berman J. Flexibility of centromere and kinetochore structures. Trends in Genetics : Tig. 28: 204-12. PMID 22445183 DOI: 10.1016/J.Tig.2012.02.003 |
0.398 |
|
| 2011 |
Abbey D, Hickman M, Gresham D, Berman J. High-Resolution SNP/CGH Microarrays Reveal the Accumulation of Loss of Heterozygosity in Commonly Used Candida albicans Strains. G3 (Bethesda, Md.). 1: 523-30. PMID 22384363 DOI: 10.1534/G3.111.000885 |
0.395 |
|
| 2011 |
Huang M, McClellan M, Berman J, Kao KC. Evolutionary dynamics of Candida albicans during in vitro evolution. Eukaryotic Cell. 10: 1413-21. PMID 21890821 DOI: 10.1128/Ec.05168-11 |
0.326 |
|
| 2011 |
Burrack LS, Applen SE, Berman J. The requirement for the Dam1 complex is dependent upon the number of kinetochore proteins and microtubules. Current Biology : Cb. 21: 889-96. PMID 21549601 DOI: 10.1016/J.Cub.2011.04.002 |
0.359 |
|
| 2011 |
Roy B, Burrack LS, Lone MA, Berman J, Sanyal K. CaMtw1, a member of the evolutionarily conserved Mis12 kinetochore protein family, is required for efficient inner kinetochore assembly in the pathogenic yeast Candida albicans. Molecular Microbiology. 80: 14-32. PMID 21276093 DOI: 10.1111/J.1365-2958.2011.07558.X |
0.396 |
|
| 2011 |
Andaluz E, Bellido A, Gómez-Raja J, Selmecki A, Bouchonville K, Calderone R, Berman J, Larriba G. Rad52 function prevents chromosome loss and truncation in Candida albicans Molecular Microbiology. 79: 1462-1482. PMID 21272099 DOI: 10.1111/J.1365-2958.2011.07532.X |
0.796 |
|
| 2011 |
Koren A, Tsai H, Tirosh I, Burrack LS, Barkai N, Berman J. Correction: Epigenetically-Inherited Centromere and Neocentromere DNA Replicates Earliest in S-Phase Plos Genetics. 7. DOI: 10.1371/Annotation/2Aba8D24-7A24-4Bbc-91F7-9B9E228Cc84D |
0.555 |
|
| 2011 |
Koren A, Tsai H, Tirosh I, Burrack LS, Barkai N, Berman J. Correction: Epigenetically-Inherited Centromere and Neocentromere DNA Replicates Earliest in S-Phase Plos Genetics. 7. DOI: 10.1371/annotation/2aba8d24-7a24-4bbc-91f7-9b9e228cc84d |
0.527 |
|
| 2010 |
Berman J. Evolutionary genomics: When abnormality is beneficial. Nature. 468: 183-4. PMID 21068824 DOI: 10.1038/468183A |
0.39 |
|
| 2010 |
Koren A, Tsai HJ, Tirosh I, Burrack LS, Barkai N, Berman J. Epigenetically-inherited centromere and neocentromere DNA replicates earliest in S-phase. Plos Genetics. 6: e1001068. PMID 20808889 DOI: 10.1371/Journal.Pgen.1001068 |
0.643 |
|
| 2010 |
Zacchi LF, Selmecki AM, Berman J, Davis DA. Low dosage of histone H4 leads to growth defects and morphological changes in Candida albicans. Plos One. 5: e10629. PMID 20498713 DOI: 10.1371/Journal.Pone.0010629 |
0.777 |
|
| 2010 |
Selmecki A, Forche A, Berman J. Genomic plasticity of the human fungal pathogen Candida albicans. Eukaryotic Cell. 9: 991-1008. PMID 20495058 DOI: 10.1128/Ec.00060-10 |
0.737 |
|
| 2009 |
Gladfelter A, Berman J. Dancing genomes: fungal nuclear positioning. Nature Reviews. Microbiology. 7: 875-86. PMID 19898490 DOI: 10.1038/Nrmicro2249 |
0.368 |
|
| 2009 |
Berman J. Growth and development: eukaryotes. Current Opinion in Microbiology. 12: 589-91. PMID 19889571 DOI: 10.1016/J.Mib.2009.10.001 |
0.438 |
|
| 2009 |
Selmecki AM, Dulmage K, Cowen LE, Anderson JB, Berman J. Acquisition of aneuploidy provides increased fitness during the evolution of antifungal drug resistance. Plos Genetics. 5: e1000705. PMID 19876375 DOI: 10.1371/Journal.Pgen.1000705 |
0.719 |
|
| 2009 |
Gale CA, Leonard MD, Finley KR, Christensen L, McClellan M, Abbey D, Kurischko C, Bensen E, Tzafrir I, Kauffman S, Becker J, Berman J. SLA2 mutations cause SWE1-mediated cell cycle phenotypes in Candida albicans and Saccharomyces cerevisiae. Microbiology (Reading, England). 155: 3847-59. PMID 19778960 DOI: 10.1099/Mic.0.033233-0 |
0.806 |
|
| 2009 |
Bouchonville K, Forche A, Tang KE, Selmecki A, Berman J. Aneuploid chromosomes are highly unstable during DNA transformation of Candida albicans. Eukaryotic Cell. 8: 1554-66. PMID 19700634 DOI: 10.1128/Ec.00209-09 |
0.792 |
|
| 2009 |
Forche A, Steinbach M, Berman J. Efficient and rapid identification of Candida albicans allelic status using SNP-RFLP. Fems Yeast Research. 9: 1061-9. PMID 19622074 DOI: 10.1111/J.1567-1364.2009.00542.X |
0.36 |
|
| 2009 |
Gerami-Nejad M, Dulmage K, Berman J. Additional cassettes for epitope and fluorescent fusion proteins in Candida albicans. Yeast (Chichester, England). 26: 399-406. PMID 19504625 DOI: 10.1002/Yea.1674 |
0.329 |
|
| 2009 |
Butler G, Rasmussen MD, Lin MF, Santos MA, Sakthikumar S, Munro CA, Rheinbay E, Grabherr M, Forche A, Reedy JL, Agrafioti I, Arnaud MB, Bates S, Brown AJ, Brunke S, ... ... Berman J, et al. Evolution of pathogenicity and sexual reproduction in eight Candida genomes. Nature. 459: 657-62. PMID 19465905 DOI: 10.1038/Nature08064 |
0.352 |
|
| 2009 |
Forche A, Magee PT, Selmecki A, Berman J, May G. Evolution in Candida albicans populations during a single passage through a mouse host. Genetics. 182: 799-811. PMID 19414562 DOI: 10.1534/Genetics.109.103325 |
0.707 |
|
| 2009 |
Ketel C, Wang HS, McClellan M, Bouchonville K, Selmecki A, Lahav T, Gerami-Nejad M, Berman J. Neocentromeres form efficiently at multiple possible loci in Candida albicans. Plos Genetics. 5: e1000400. PMID 19266018 DOI: 10.1371/Journal.Pgen.1000400 |
0.804 |
|
| 2008 |
Joglekar AP, Bouck D, Finley K, Liu X, Wan Y, Berman J, He X, Salmon ED, Bloom KS. Molecular architecture of the kinetochore-microtubule attachment site is conserved between point and regional centromeres. The Journal of Cell Biology. 181: 587-94. PMID 18474626 DOI: 10.1083/Jcb.200803027 |
0.357 |
|
| 2008 |
Forche A, Alby K, Schaefer D, Johnson AD, Berman J, Bennett RJ. The parasexual cycle in Candida albicans provides an alternative pathway to meiosis for the formation of recombinant strains. Plos Biology. 6: e110. PMID 18462019 DOI: 10.1371/Journal.Pbio.0060110 |
0.659 |
|
| 2008 |
Selmecki A, Gerami-Nejad M, Paulson C, Forche A, Berman J. An isochromosome confers drug resistance in vivo by amplification of two genes, ERG11 and TAC1. Molecular Microbiology. 68: 624-41. PMID 18363649 DOI: 10.1111/J.1365-2958.2008.06176.X |
0.713 |
|
| 2008 |
Finley KR, Bouchonville KJ, Quick A, Berman J. Dynein-dependent nuclear dynamics affect morphogenesis in Candida albicans by means of the Bub2p spindle checkpoint. Journal of Cell Science. 121: 466-76. PMID 18211963 DOI: 10.1242/Jcs.015172 |
0.777 |
|
| 2008 |
Legrand M, Forche A, Selmecki A, Chan C, Kirkpatrick DT, Berman J. Haplotype mapping of a diploid non-meiotic organism using existing and induced aneuploidies. Plos Genetics. 4: e1. PMID 18179283 DOI: 10.1371/Journal.Pgen.0040001 |
0.735 |
|
| 2007 |
Coste A, Selmecki A, Forche A, Diogo D, Bougnoux ME, d'Enfert C, Berman J, Sanglard D. Genotypic evolution of azole resistance mechanisms in sequential Candida albicans isolates. Eukaryotic Cell. 6: 1889-904. PMID 17693596 DOI: 10.1128/Ec.00151-07 |
0.719 |
|
| 2007 |
Tirosh I, Berman J, Barkai N. The pattern and evolution of yeast promoter bendability. Trends in Genetics : Tig. 23: 318-21. PMID 17418911 DOI: 10.1016/J.Tig.2007.03.015 |
0.308 |
|
| 2006 |
Berman J. Morphogenesis and cell cycle progression in Candida albicans. Current Opinion in Microbiology. 9: 595-601. PMID 17055773 DOI: 10.1016/J.Mib.2006.10.007 |
0.365 |
|
| 2006 |
Oberholzer U, Nantel A, Berman J, Whiteway M. Transcript profiles of Candida albicans cortical actin patch mutants reflect their cellular defects: contribution of the Hog1p and Mkc1p signaling pathways. Eukaryotic Cell. 5: 1252-65. PMID 16896210 DOI: 10.1128/Ec.00385-05 |
0.373 |
|
| 2006 |
Selmecki A, Forche A, Berman J. Aneuploidy and isochromosome formation in drug-resistant Candida albicans. Science (New York, N.Y.). 313: 367-70. PMID 16857942 DOI: 10.1126/Science.1128242 |
0.716 |
|
| 2006 |
Coste A, Turner V, Ischer F, Morschhäuser J, Forche A, Selmecki A, Berman J, Bille J, Sanglard D. A mutation in Tac1p, a transcription factor regulating CDR1 and CDR2, is coupled with loss of heterozygosity at chromosome 5 to mediate antifungal resistance in Candida albicans. Genetics. 172: 2139-56. PMID 16452151 DOI: 10.1534/Genetics.105.054767 |
0.713 |
|
| 2005 |
Ihmels J, Bergmann S, Berman J, Barkai N. Comparative gene expression analysis by differential clustering approach: application to the Candida albicans transcription program. Plos Genetics. 1: e39. PMID 16470937 DOI: 10.1371/Journal.Pgen.0010039 |
0.314 |
|
| 2005 |
Finley KR, Berman J. Microtubules in Candida albicans hyphae drive nuclear dynamics and connect cell cycle progression to morphogenesis. Eukaryotic Cell. 4: 1697-711. PMID 16215177 DOI: 10.1128/Ec.4.10.1697-1711.2005 |
0.796 |
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| 2005 |
Braun BR, van Het Hoog M, d'Enfert C, Martchenko M, Dungan J, Kuo A, Inglis DO, Uhl MA, Hogues H, Berriman M, Lorenz M, Levitin A, Oberholzer U, Bachewich C, Harcus D, ... ... Berman J, et al. A human-curated annotation of the Candida albicans genome. Plos Genetics. 1: 36-57. PMID 16103911 DOI: 10.1371/Journal.Pgen.0010001 |
0.336 |
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| 2005 |
Ihmels J, Bergmann S, Gerami-Nejad M, Yanai I, McClellan M, Berman J, Barkai N. Rewiring of the yeast transcriptional network through the evolution of motif usage. Science (New York, N.Y.). 309: 938-40. PMID 16081737 DOI: 10.1126/Science.1113833 |
0.33 |
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| 2005 |
Crampin H, Finley K, Gerami-Nejad M, Court H, Gale C, Berman J, Sudbery P. Candida albicans hyphae have a Spitzenkörper that is distinct from the polarisome found in yeast and pseudohyphae. Journal of Cell Science. 118: 2935-47. PMID 15976451 DOI: 10.1242/Jcs.02414 |
0.797 |
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| 2005 |
Bensen ES, Clemente-Blanco A, Finley KR, Correa-Bordes J, Berman J. The mitotic cyclins Clb2p and Clb4p affect morphogenesis in Candida albicans. Molecular Biology of the Cell. 16: 3387-400. PMID 15888543 DOI: 10.1091/Mbc.E04-12-1081 |
0.799 |
|
| 2005 |
Selmecki A, Bergmann S, Berman J. Comparative genome hybridization reveals widespread aneuploidy in Candida albicans laboratory strains. Molecular Microbiology. 55: 1553-65. PMID 15720560 DOI: 10.1111/J.1365-2958.2005.04492.X |
0.741 |
|
| 2004 |
Sudbery P, Gow N, Berman J. The distinct morphogenic states of Candida albicans. Trends in Microbiology. 12: 317-24. PMID 15223059 DOI: 10.1016/J.Tim.2004.05.008 |
0.356 |
|
| 2004 |
Gerami-Nejad M, Hausauer D, McClellan M, Berman J, Gale C. Cassettes for the PCR-mediated construction of regulatable alleles in Candida albicans. Yeast (Chichester, England). 21: 429-36. PMID 15116343 DOI: 10.1002/Yea.1080 |
0.386 |
|
| 2003 |
Tseng-Rogenski SSI, Chong JL, Thomas CB, Enomoto S, Berman J, Chang TH. Functional conservation of Dhh1p, a cytoplasmic DExD/H-box protein present in large complexes Nucleic Acids Research. 31: 4995-5002. PMID 12930949 DOI: 10.1093/Nar/Gkg712 |
0.362 |
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| 2003 |
Dahlseid JN, Lew-Smith J, Lelivelt MJ, Enomoto S, Ford A, Desruisseaux M, McClellan M, Lue N, Culbertson MR, Berman J. mRNAs encoding telomerase components and regulators are controlled by UPF genes in Saccharomyces cerevisiae Eukaryotic Cell. 2: 134-142. PMID 12582130 DOI: 10.1128/Ec.2.1.134-142.2003 |
0.372 |
|
| 2002 |
Berman J, Sudbery PE. Candida Albicans: a molecular revolution built on lessons from budding yeast. Nature Reviews. Genetics. 3: 918-30. PMID 12459722 DOI: 10.1038/Nrg948 |
0.342 |
|
| 2002 |
Bensen ES, Filler SG, Berman J. A forkhead transcription factor is important for true hyphal as well as yeast morphogenesis in Candida albicans. Eukaryotic Cell. 1: 787-98. PMID 12455696 DOI: 10.1128/Ec.1.5.787-798.2002 |
0.408 |
|
| 2002 |
Enomoto S, Glowczewski L, Berman J. MEC3, MEC1, and DDC2 are essential components of a telomere checkpoint pathway required for cell cycle arrest during senescence in Saccharomyces cerevisiae. Molecular Biology of the Cell. 13: 2626-38. PMID 12181334 DOI: 10.1091/Mbc.02-02-0012 |
0.375 |
|
| 2002 |
Gale C, Gerami-Nejad M, McClellan M, Vandoninck S, Longtine MS, Berman J. Candida albicans Int1p interacts with the septin ring in yeast and hyphal cells. Molecular Biology of the Cell. 12: 3538-49. PMID 11694587 DOI: 10.1091/Mbc.12.11.3538 |
0.4 |
|
| 2002 |
Gerami-Nejad M, Berman J, Gale CA. Cassettes for PCR-mediated construction of green, yellow, and cyan fluorescent protein fusions in Candida albicans. Yeast (Chichester, England). 18: 859-64. PMID 11427968 DOI: 10.1002/Yea.738 |
0.328 |
|
| 2001 |
Asleson CM, Bensen ES, Gale CA, Melms AS, Kurischko C, Berman J. Candida albicans INT1-induced filamentation in Saccharomyces cerevisiae depends on Sla2p. Molecular and Cellular Biology. 21: 1272-84. PMID 11158313 DOI: 10.1128/Mcb.21.4.1272-1284.2001 |
0.352 |
|
| 2000 |
Asleson CM, Asleson JC, Malandra E, Johnston S, Berman J. Filamentous growth of Saccharomyces cerevisiae is regulated by manganese. Fungal Genetics and Biology. 30: 155-162. PMID 11017771 DOI: 10.1006/Fgbi.2000.1214 |
0.324 |
|
| 1998 |
Lew JE, Enomoto S, Berman J. Telomere length regulation and telomeric chromatin require the nonsense-mediated mRNA decay pathway. Molecular and Cellular Biology. 18: 6121-30. PMID 9742129 DOI: 10.1128/Mcb.18.10.6121 |
0.376 |
|
| 1998 |
Qian Z, Huang H, Hong JY, Burck CL, Johnston SD, Berman J, Carol A, Liebman SW. Yeast Ty1 retrotransposition is stimulated by a synergistic interaction between mutations in chromatin assembly factor I and histone regulatory proteins. Molecular and Cellular Biology. 18: 4783-92. PMID 9671488 DOI: 10.1128/Mcb.18.8.4783 |
0.338 |
|
| 1998 |
Schnell JR, Berman J, Bloomfield VA. Insertion of telomere repeat sequence decreases plasmid DNA condensation by cobalt (III) hexaammine. Biophysical Journal. 74: 1484-91. PMID 9512044 DOI: 10.1016/S0006-3495(98)77860-9 |
0.344 |
|
| 1998 |
Gale CA, Bendel CM, McClellan M, Hauser M, Becker JM, Berman J, Hostetter MK. Linkage of adhesion, filamentous growth, and virulence in Candida albicans to a single gene, INT1 Science. 279: 1355-1358. PMID 9478896 DOI: 10.1126/Science.279.5355.1355 |
0.365 |
|
| 1998 |
Enomoto S, Berman J. Chromatin assembly factor I contributes to the maintenance, but not the re-establishment, of silencing at the yeast silent mating loci. Genes & Development. 12: 219-32. PMID 9436982 DOI: 10.1101/Gad.12.2.219 |
0.373 |
|
| 1997 |
Enomoto S, McCune-Zierath PD, Gerami-Nejad M, Sanders MA, Berman J. RLF2, a subunit of yeast chromatin assembly factor-I, is required for telomeric chromatm function in vivo Genes and Development. 11: 358-370. PMID 9030688 DOI: 10.1101/Gad.11.3.358 |
0.414 |
|
| 1995 |
Enomoto S, Longtine MS, Berman J. TEL+CEN antagonism on plasmids involves telomere repeat sequences tracts and gene products that interact with chromosomal telomeres. Chromosoma. 103: 237-50. PMID 7988285 DOI: 10.1007/Bf00352248 |
0.423 |
|
| 1995 |
Konkel LM, Enomoto S, Chamberlain EM, McCune-Zierath P, Iyadurai SJ, Berman J. A class of single-stranded telomeric DNA-binding proteins required for Rap1p localization in yeast nuclei. Proceedings of the National Academy of Sciences of the United States of America. 92: 5558-62. PMID 7777547 DOI: 10.1073/Pnas.92.12.5558 |
0.778 |
|
| 1994 |
Petracek ME, Konkel LM, Kable ML, Berman J. A Chlamydomonas protein that binds single-stranded G-strand telomere DNA. The Embo Journal. 13: 3648-58. PMID 8062839 DOI: 10.1002/J.1460-2075.1994.Tb06672.X |
0.753 |
|
| 1992 |
Petracek ME, Berman J. Chlamydomonas reinhardtii telomere repeats form unstable structures involving guanine-guanine base pairs. Nucleic Acids Research. 20: 89-95. PMID 1738609 DOI: 10.1093/Nar/20.1.89 |
0.314 |
|
| 1992 |
Longtine MS, Enomoto S, Finstad SL, Berman J. Yeast telomere repeat sequence (TRS) improves circular plasmid segregation, and TRS plasmid segregation involves the RAP1 gene product. Molecular and Cellular Biology. 12: 1997-2009. PMID 1569937 DOI: 10.1128/Mcb.12.5.1997 |
0.38 |
|
| 1990 |
Petracek ME, Lefebvre PA, Silflow CD, Berman J. Chlamydomonas telomere sequences are A+T-rich but contain three consecutive G-C base pairs. Proceedings of the National Academy of Sciences of the United States of America. 87: 8222-6. PMID 2236035 DOI: 10.1073/Pnas.87.21.8222 |
0.344 |
|
| 1987 |
Berman J, Eisenberg S, Tye BK. [32] An agarose gel electrophoresis assay for the detection of DNA-binding activities in yeast cell extracts Methods in Enzymology. 155: 528-537. PMID 3323822 DOI: 10.1016/0076-6879(87)55034-0 |
0.6 |
|
| 1986 |
Berman J, Tachibana CY, Tye BK. Identification of a telomere-binding activity from yeast Proceedings of the National Academy of Sciences of the United States of America. 83: 3713-3717. PMID 3520552 DOI: 10.1073/Pnas.83.11.3713 |
0.609 |
|
| 1985 |
Berman J, Zilberstein A, Salomon D, Zamir A. Expression of a nitrogen-fixation gene encoding a nitrogenase subunit in yeast. Gene. 35: 1-9. PMID 3896931 DOI: 10.1016/0378-1119(85)90151-9 |
0.34 |
|
| 1983 |
Bitoun R, Berman J, Zilberstein A, Holland D, Cohen JB, Givol D, Zamir A. Promoter mutations that allow nifA-independent expression of the nitrogen fixation nifHDKY operon. Proceedings of the National Academy of Sciences of the United States of America. 80: 5812-6. PMID 6310592 DOI: 10.1073/Pnas.80.19.5812 |
0.324 |
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