| Year |
Citation |
Score |
| 2020 |
Wang X, Allen M, Li S, Quicksall ZS, Patel TA, Carnwath TP, Reddy JS, Carrasquillo MM, Lincoln SJ, Nguyen TT, Malphrus KG, Dickson DW, Crook JE, Asmann YW, Ertekin-Taner N. Deciphering cellular transcriptional alterations in Alzheimer's disease brains. Molecular Neurodegeneration. 15: 38. PMID 32660529 DOI: 10.1186/S13024-020-00392-6 |
0.327 |
|
| 2020 |
Ren Y, Cherukuri Y, Wickland DP, Sarangi V, Tian S, Carter JM, Mansfield AS, Block MS, Sherman ME, Knutson KL, Lin Y, Asmann YW. HLA class-I and class-II restricted neoantigen loads predict overall survival in breast cancer. Oncoimmunology. 9: 1744947. PMID 32523802 DOI: 10.1080/2162402X.2020.1744947 |
0.308 |
|
| 2020 |
Zhou X, Nicholson AM, Ren Y, Brooks M, Jiang P, Zuberi A, Phuoc HN, Perkerson RB, Matchett B, Parsons TM, Finch NA, Lin W, Qiao W, Castanedes-Casey M, Phillips V, ... ... Asmann Y, et al. Loss of TMEM106B leads to myelination deficits: implications for frontotemporal dementia treatment strategies. Brain : a Journal of Neurology. PMID 32504082 DOI: 10.1093/Brain/Awaa141 |
0.317 |
|
| 2020 |
Zhao N, Ren Y, Yamazaki Y, Qiao W, Li F, Felton LM, Mahmoudiandehkordi S, Kueider-Paisley A, Sonoustoun B, Arnold M, Shue F, Zheng J, Attrebi ON, Martens YA, Li Z, ... ... Asmann YW, et al. Alzheimer's Risk Factors Age, APOE Genotype, and Sex Drive Distinct Molecular Pathways. Neuron. PMID 32199103 DOI: 10.1016/J.Neuron.2020.02.034 |
0.304 |
|
| 2020 |
Chandrashekar P, Ahmadinejad N, Wang J, Sekulic A, Egan JB, Asmann YW, Kumar S, Maley C, Liu L. Somatic selection distinguishes oncogenes and tumor suppressor genes. Bioinformatics (Oxford, England). 36: 1712-1717. PMID 32176769 DOI: 10.1093/Bioinformatics/Btz851 |
0.341 |
|
| 2020 |
Hartert KT, Wenzl K, Krull JE, Manske M, Sarangi V, Asmann Y, Larson MC, Maurer MJ, Slager S, Macon WR, King RL, Feldman AL, Gandhi AK, Link BK, Habermann TM, et al. Targeting of inflammatory pathways with R2CHOP in high-risk DLBCL. Leukemia. PMID 32139889 DOI: 10.1038/S41375-020-0766-4 |
0.354 |
|
| 2020 |
Carrano A, Phillipps J, Lara-Velazquez M, Zarco N, Suarez-Meade P, Chaichana K, Quinones-Hinojosa A, Asmann Y, Guerrero-Cázares H. Abstract 1574: The role of human cerebrospinal fluid in glioblastoma malignancy Cancer Research. 80: 1574-1574. DOI: 10.1158/1538-7445.Am2020-1574 |
0.308 |
|
| 2019 |
Kleinstern G, Yan H, Hildebrandt MAT, Vijai J, Berndt SI, Ghesquières H, McKay J, Wang SS, Nieters A, Ye Y, Monnereau A, Brooks-Wilson AR, Lan Q, Melbye M, Jackson RD, ... ... Asmann Y, et al. Inherited variants at 3q13.33 and 3p24.1 are associated with risk of diffuse large B-cell lymphoma and implicate immune pathways. Human Molecular Genetics. PMID 31600786 DOI: 10.1093/Hmg/Ddz228 |
0.349 |
|
| 2019 |
Dickson DW, Baker MC, Jackson JL, DeJesus-Hernandez M, Finch NA, Tian S, Heckman MG, Pottier C, Gendron TF, Murray ME, Ren Y, Reddy JS, Graff-Radford NR, Boeve BF, Petersen RC, ... ... Asmann YW, et al. Extensive transcriptomic study emphasizes importance of vesicular transport in C9orf72 expansion carriers. Acta Neuropathologica Communications. 7: 150. PMID 31594549 DOI: 10.1186/S40478-019-0797-0 |
0.34 |
|
| 2019 |
Ebbert MTW, Jensen TD, Jansen-West K, Sens JP, Reddy JS, Ridge PG, Kauwe JSK, Belzil V, Pregent L, Carrasquillo MM, Keene D, Larson E, Crane P, Asmann YW, Ertekin-Taner N, et al. Systematic analysis of dark and camouflaged genes reveals disease-relevant genes hiding in plain sight. Genome Biology. 20: 97. PMID 31104630 DOI: 10.1186/S13059-019-1707-2 |
0.357 |
|
| 2019 |
Pottier C, Ren Y, Perkerson RB, Baker M, Jenkins GD, van Blitterswijk M, DeJesus-Hernandez M, van Rooij JGJ, Murray ME, Christopher E, McDonnell SK, Fogarty Z, Batzler A, Tian S, Vicente CT, ... ... Asmann Y, et al. Genome-wide analyses as part of the international FTLD-TDP whole-genome sequencing consortium reveals novel disease risk factors and increases support for immune dysfunction in FTLD. Acta Neuropathologica. PMID 30739198 DOI: 10.1007/S00401-019-01962-9 |
0.402 |
|
| 2019 |
Rahman ZA, Cherukuri Y, Heckman M, Finn LE, Cerhan JR, Asmann YW, Foran JM. Evaluation of etiologic genetic polymorphisms by whole exome sequencing (WES) in the Mayo Clinic AML epidemiology cohort (MCAEC). Journal of Clinical Oncology. 37: 7021-7021. DOI: 10.1200/Jco.2019.37.15_Suppl.7021 |
0.367 |
|
| 2019 |
Clay-Gilmour AI, Hildebrandt M, Asmann Y, Brown EE, Hofmann JN, Spinelli J, Giles G, Bhatti P, Cozen W, Robinson DP, O'Brien DR, Rajkumar SV, Tian S, Berndt SI, Chanock SJ, et al. Association between a Polygenic Risk Score for Multiple Myeloma Risk and Overall Survival Blood. 134: 4366-4366. DOI: 10.1182/Blood-2019-126088 |
0.317 |
|
| 2019 |
Wenzl K, Ortiz M, Stong N, Huang CC, Maurer MJ, Towfic F, Hagner PR, Nikbakht H, Stokes M, Lata S, Kamalakaran S, Mavrommatis K, Trotter M, King RL, Link BK, ... ... Asmann Y, et al. Genomic Landscape Including Novel Mutational Drivers in Relapsed/Refractory Diffuse Large B Cell Lymphoma Blood. 134: 919-919. DOI: 10.1182/Blood-2019-123694 |
0.306 |
|
| 2019 |
Allen M, Reddy JS, Carrasquillo MM, Wang X, Lincoln SJ, Nguyen T, Malphrus KG, Asmann YW, Murray ME, Bu G, Dickson DW, Ertekin-Taner N. INTEGRATIVE GENOMIC PROFILING TO IDENTIFY GENES AND PATHWAYS ASSOCIATED WITH VASCULAR RISK IN AD Alzheimer's & Dementia. 15: P1617. DOI: 10.1016/J.Jalz.2019.06.4843 |
0.334 |
|
| 2018 |
Wenzl K, Manske MK, Sarangi V, Asmann YW, Greipp PT, Schoon HR, Braggio E, Maurer MJ, Feldman AL, Witzig TE, Slager SL, Ansell SM, Cerhan JR, Novak AJ. Loss of TNFAIP3 enhances MYD88-driven signaling in non-Hodgkin lymphoma. Blood Cancer Journal. 8: 97. PMID 30301877 DOI: 10.1038/S41408-018-0130-3 |
0.341 |
|
| 2018 |
Allen M, Wang X, Serie DJ, Strickland SL, Burgess JD, Koga S, Younkin CS, Nguyen TT, Malphrus KG, Lincoln SJ, Alamprese M, Zhu K, Chang R, Carrasquillo MM, Kouri N, ... ... Asmann YW, et al. Divergent brain gene expression patterns associate with distinct cell-specific tau neuropathology traits in progressive supranuclear palsy. Acta Neuropathologica. PMID 30136084 DOI: 10.1007/S00401-018-1900-5 |
0.354 |
|
| 2018 |
Ren Y, van Blitterswijk M, Allen M, Carrasquillo MM, Reddy JS, Wang X, Beach TG, Dickson DW, Ertekin-Taner N, Asmann YW, Rademakers R. TMEM106B haplotypes have distinct gene expression patterns in aged brain. Molecular Neurodegeneration. 13: 35. PMID 29970152 DOI: 10.1186/S13024-018-0268-2 |
0.338 |
|
| 2018 |
Fama A, Xiang J, Link BK, Allmer C, Klinzman D, Feldman AL, Nowakowski GS, Liebow M, Larson MC, Maurer MJ, Ansell SM, Novak AJ, Asmann YW, Slager SL, Call TG, et al. Human Pegivirus infection and lymphoma risk and prognosis: a North American study. British Journal of Haematology. PMID 29808922 DOI: 10.1111/Bjh.15416 |
0.304 |
|
| 2018 |
Ren Y, Reddy JS, Pottier C, Sarangi V, Tian S, Sinnwell JP, McDonnell SK, Biernacka JM, Carrasquillo MM, Ross OA, Ertekin-Taner N, Rademakers R, Hudson M, Mainzer LS, Asmann YW. Identification of missing variants by combining multiple analytic pipelines. Bmc Bioinformatics. 19: 139. PMID 29661148 DOI: 10.1186/S12859-018-2151-0 |
0.333 |
|
| 2017 |
Bernatsky S, Velásquez García HA, Spinelli JJ, Gaffney P, Smedby KE, Ramsey-Goldman R, Wang SS, Adami HO, Albanes D, Angelucci E, Ansell SM, Asmann YW, Becker N, Benavente Y, Berndt SI, et al. Lupus-related single nucleotide polymorphisms and risk of diffuse large B-cell lymphoma. Lupus Science & Medicine. 4: e000187. PMID 29214033 DOI: 10.1136/Lupus-2016-000187 |
0.314 |
|
| 2017 |
Davila JI, Starr JS, Attia S, Wang C, Knudson RA, Necela BM, Sarangi V, Sun Z, Ren Y, Casler JD, Menke DM, Oliver GR, Joseph RW, Copland JA, Parker AS, ... ... Asmann YW, et al. Comprehensive Genomic Profiling of a Rare Thyroid Follicular Dendritic Cell Sarcoma. Rare Tumors. 9: 6834. PMID 28975018 DOI: 10.4081/Rt.2017.6834 |
0.377 |
|
| 2017 |
DeRycke MS, Gunawardena S, Balcom JR, Pickart AM, Waltman LA, French AJ, McDonnell S, Riska SM, Fogarty ZC, Larson MC, Middha S, Eckloff BW, Asmann YW, Ferber MJ, Haile RW, et al. Targeted sequencing of 36 known or putative colorectal cancer susceptibility genes. Molecular Genetics & Genomic Medicine. 5: 553-569. PMID 28944238 DOI: 10.1002/Mgg3.317 |
0.323 |
|
| 2017 |
Finch NA, Wang X, Baker MC, Heckman MG, Gendron TF, Bieniek KF, Wuu J, DeJesus-Hernandez M, Brown PH, Chew J, Jansen-West KR, Daughrity LM, Nicholson AM, Murray ME, Josephs KA, ... ... Asmann YW, et al. Abnormal expression of homeobox genes and transthyretin in C9ORF72 expansion carriers. Neurology. Genetics. 3: e161. PMID 28660252 DOI: 10.1212/Nxg.0000000000000161 |
0.343 |
|
| 2017 |
N'Songo A, Carrasquillo MM, Wang X, Burgess JD, Nguyen T, Asmann YW, Serie DJ, Younkin SG, Allen M, Pedraza O, Duara R, Greig Custo MT, Graff-Radford NR, Ertekin-Taner N. African American exome sequencing identifies potential risk variants at Alzheimer disease loci. Neurology. Genetics. 3: e141. PMID 28480329 DOI: 10.1212/Nxg.0000000000000141 |
0.335 |
|
| 2017 |
Manso BA, Wenzl K, Asmann YW, Maurer MJ, Manske M, Yang ZZ, Slager SL, Nowakowski GS, Ansell SM, Witzig TE, Feldman AL, Rimsza L, Link B, Cerhan JR, Novak AJ. Whole-exome analysis reveals novel somatic genomic alterations associated with cell of origin in diffuse large B-cell lymphoma. Blood Cancer Journal. 7: e553. PMID 28430174 DOI: 10.1038/Bcj.2017.33 |
0.321 |
|
| 2017 |
Parasramka M, Yan IK, Wang X, Nguyen P, Matsuda A, Maji S, Foye C, Asmann Y, Patel T. BAP1 dependent expression of long non-coding RNA NEAT-1 contributes to sensitivity to gemcitabine in cholangiocarcinoma. Molecular Cancer. 16: 22. PMID 28122578 DOI: 10.1186/S12943-017-0587-X |
0.319 |
|
| 2017 |
N'Songo A, Carrasquillo MM, Wang X, Nguyen T, Asmann Y, Younkin SG, Allen M, Duara R, Custo MT, Graff-Radford N, Ertekin-Taner N. Comprehensive Screening for Disease Risk Variants in Early-Onset Alzheimer's Disease Genes in African Americans Identifies Novel PSEN Variants. Journal of Alzheimer's Disease : Jad. PMID 28106563 DOI: 10.3233/Jad-161185 |
0.343 |
|
| 2017 |
Wenzl K, Manske M, Muse A, Asmann YW, Maurer MJ, Witzig TE, Slager SL, Ansell SM, Cerhan JR, Novak AJ. Beyond MYD88: Implications of TNFAIP3 Loss on MYD88 Driven Lymphomas Blood. 130: 1459-1459. DOI: 10.1182/Blood.V130.Suppl_1.1459.1459 |
0.352 |
|
| 2016 |
Parasramka M, Serie DJ, Asmann YW, Eckel-Passow JE, Castle EP, Stanton ML, Leibovich BC, Thompson RH, Thompson EA, Parker AS, Ho TH, Joseph RW. Validation of Gene Expression Signatures to Identify Low-risk Clear-cell Renal Cell Carcinoma Patients at Higher Risk for Disease-related Death. European Urology Focus. 2: 608-615. PMID 28723492 DOI: 10.1016/J.Euf.2016.03.008 |
0.331 |
|
| 2016 |
Carrasquillo MM, Allen M, Burgess JD, Wang X, Strickland SL, Aryal S, Siuda J, Kachadoorian ML, Medway C, Younkin CS, Nair A, Wang C, Chanana P, Serie D, Nguyen T, ... ... Asmann YW, et al. A candidate regulatory variant at the TREM gene cluster associates with decreased Alzheimer's disease risk and increased TREML1 and TREM2 brain gene expression. Alzheimer's & Dementia : the Journal of the Alzheimer's Association. PMID 27939925 DOI: 10.1016/J.Jalz.2016.10.005 |
0.34 |
|
| 2016 |
Allen M, Carrasquillo MM, Funk C, Heavner BD, Zou F, Younkin CS, Burgess JD, Chai HS, Crook J, Eddy JA, Li H, Logsdon B, Peters MA, Dang KK, Wang X, ... ... Asmann Y, et al. Human whole genome genotype and transcriptome data for Alzheimer's and other neurodegenerative diseases. Scientific Data. 3: 160089. PMID 27727239 DOI: 10.1038/Sdata.2016.89 |
0.359 |
|
| 2016 |
Pottier C, Ravenscroft TA, Brown PH, Finch NA, Baker M, Parsons M, Asmann YW, Ren Y, Christopher E, Levitch D, van Blitterswijk M, Cruchaga C, Campion D, Nicolas G, Richard AC, et al. TYROBP genetic variants in early-onset Alzheimer's disease. Neurobiology of Aging. PMID 27658901 DOI: 10.1016/J.Neurobiolaging.2016.07.028 |
0.354 |
|
| 2016 |
Demchenko Y, Roschke A, Chen WD, Asmann Y, Bergsagel PL, Kuehl WM. Frequent occurrence of large duplications at reciprocal genomic rearrangement breakpoints in multiple myeloma and other tumors. Nucleic Acids Research. PMID 27353332 DOI: 10.1093/Nar/Gkw527 |
0.344 |
|
| 2016 |
Boddicker RL, Razidlo GL, Dasari S, Zeng Y, Hu G, Knudson RA, Greipp PT, Davila JI, Johnson SH, Porcher JC, Smadbeck JB, Eckloff BW, Billadeau DD, Kurtin PJ, McNiven MA, ... ... Asmann YW, et al. Integrated mate-pair and RNA sequencing identifies novel, targetable gene fusions in peripheral T-cell lymphoma. Blood. PMID 27297792 DOI: 10.1182/Blood-2016-03-707141 |
0.37 |
|
| 2016 |
Allen M, Burgess JD, Ballard T, Serie D, Wang X, Younkin CS, Sun Z, Kouri N, Baheti S, Wang C, Carrasquillo MM, Nguyen T, Lincoln S, Malphrus K, Murray M, ... ... Asmann Y, et al. Gene expression, methylation and neuropathology correlations at progressive supranuclear palsy risk loci. Acta Neuropathologica. PMID 27115769 DOI: 10.1007/S00401-016-1576-7 |
0.318 |
|
| 2016 |
Machiela MJ, Lan Q, Slager SL, Vermeulen RC, Teras LR, Camp NJ, Cerhan JR, Spinelli JJ, Wang SS, Nieters A, Vijai J, Yeager M, Wang Z, Ghesquières H, McKay J, ... ... Asmann YW, et al. Genetically predicted longer telomere length is associated with increased risk of B-cell lymphoma subtypes. Human Molecular Genetics. 25: 1663-76. PMID 27008888 DOI: 10.1093/Hmg/Ddw027 |
0.313 |
|
| 2016 |
Misund K, Keane N, Asmann YW, Wier SV, Riggs D, Ahmann G, Chesi M, Körtum KM, Fonseca R, Stewart AK, Braggio E, Bergsagel PL. Complementary Activation of Ccnd, MYC, RAS and NFkB By Mutations in Multiple Myeloma Blood. 128: 355-355. DOI: 10.1182/Blood.V128.22.355.355 |
0.372 |
|
| 2016 |
Wenzl K, Manso B, Asmann YW, Maurer MJ, Manske M, Yang Z, Slager SL, Nowakowski GS, Ansell SM, Witzig TE, Feldman AL, Rimsza L, Link BK, Cerhan JR, Novak AJ. Whole-Exome Analysis Reveals Novel Somatic Genomic Alterations Associated with Cell of Origin in Diffuse Large B-Cell Lymphoma Blood. 128: 2935-2935. DOI: 10.1182/Blood.V128.22.2935.2935 |
0.377 |
|
| 2016 |
Thompson E, Asmann Y, Su X, Ellis M, Shao J, Hu Y, White K, Cherniack A, Hoadley K, Serie D, Perez E, Perou C. Abstract S4-02: A comprehensive analysis of fusion transcripts in breast cancer reveals associations between number of fusion transcripts, copy number events, gene expression profiles, and potentially clinical outcome Cancer Research. 76. DOI: 10.1158/1538-7445.Sabcs15-S4-02 |
0.364 |
|
| 2015 |
Allen M, Kachadoorian M, Carrasquillo MM, Karhade A, Manly L, Burgess JD, Wang C, Serie D, Wang X, Siuda J, Zou F, Chai HS, Younkin C, Crook J, Medway C, ... ... Asmann YW, et al. Late-onset Alzheimer disease risk variants mark brain regulatory loci. Neurology. Genetics. 1: e15. PMID 27066552 DOI: 10.1212/Nxg.0000000000000012 |
0.339 |
|
| 2015 |
Ghesquieres H, Slager SL, Jardin F, Veron AS, Asmann YW, Maurer MJ, Fest T, Habermann TM, Bene MC, Novak AJ, Mareschal S, Haioun C, Lamy T, Ansell SM, Tilly H, et al. Genome-Wide Association Study of Event-Free Survival in Diffuse Large B-Cell Lymphoma Treated With Immunochemotherapy. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. PMID 26460308 DOI: 10.1200/Jco.2014.60.2573 |
0.319 |
|
| 2015 |
Perez EA, Baehner FL, Butler SM, Thompson EA, Dueck AC, Jamshidian F, Cherbavaz D, Yoshizawa C, Shak S, Kaufman PA, Davidson NE, Gralow J, Asmann YW, Ballman KV. The relationship between quantitative human epidermal growth factor receptor 2 gene expression by the 21-gene reverse transcriptase polymerase chain reaction assay and adjuvant trastuzumab benefit in Alliance N9831. Breast Cancer Research : Bcr. 17: 133. PMID 26429296 DOI: 10.1186/S13058-015-0643-7 |
0.329 |
|
| 2015 |
Novak AJ, Asmann YW, Maurer MJ, Wang C, Slager SL, Hodge LS, Manske M, Price-Troska T, Yang ZZ, Zimmermann MT, Nowakowski GS, Ansell SM, Witzig TE, McPhail E, Ketterling R, et al. Whole-exome analysis reveals novel somatic genomic alterations associated with outcome in immunochemotherapy-treated diffuse large B-cell lymphoma. Blood Cancer Journal. 5: e346. PMID 26314988 DOI: 10.1038/Bcj.2015.69 |
0.344 |
|
| 2015 |
Lin WH, Asmann YW, Anastasiadis PZ. Expression of polarity genes in human cancer. Cancer Informatics. 14: 15-28. PMID 25991909 DOI: 10.4137/Cin.S18964 |
0.321 |
|
| 2015 |
Braggio E, Van Wier S, Ojha J, McPhail E, Asmann YW, Egan J, da Silva JA, Schiff D, Lopes MB, Decker PA, Valdez R, Tibes R, Eckloff B, Witzig TE, Stewart AK, et al. Genome-Wide Analysis Uncovers Novel Recurrent Alterations in Primary Central Nervous System Lymphomas. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 21: 3986-94. PMID 25991819 DOI: 10.1158/1078-0432.Ccr-14-2116 |
0.382 |
|
| 2015 |
Jang JS, Lee A, Li J, Liyanage H, Yang Y, Guo L, Asmann YW, Li PW, Erickson-Johnson M, Sakai Y, Sun Z, Jeon HS, Hwang H, Bungum AO, Edell ES, et al. Common Oncogene Mutations and Novel SND1-BRAF Transcript Fusion in Lung Adenocarcinoma from Never Smokers. Scientific Reports. 5: 9755. PMID 25985019 DOI: 10.1038/Srep09755 |
0.304 |
|
| 2015 |
Gupta E, Guthrie KJ, Krishna M, Asmann Y, Parker AS, Joseph RW. Whole exome sequencing of a patient with metastatic hidradenocarcinoma and review of the literature. Rare Tumors. 7: 5719. PMID 25918615 DOI: 10.4081/Rt.2015.5719 |
0.326 |
|
| 2015 |
Chien J, Sicotte H, Fan JB, Humphray S, Cunningham JM, Kalli KR, Oberg AL, Hart SN, Li Y, Davila JI, Baheti S, Wang C, Dietmann S, Atkinson EJ, Asmann YW, et al. TP53 mutations, tetraploidy and homologous recombination repair defects in early stage high-grade serous ovarian cancer. Nucleic Acids Research. PMID 25916844 DOI: 10.1093/Nar/Gkv111 |
0.334 |
|
| 2015 |
Perez EA, Thompson EA, Ballman KV, Anderson SK, Asmann YW, Kalari KR, Eckel-Passow JE, Dueck AC, Tenner KS, Jen J, Fan JB, Geiger XJ, McCullough AE, Chen B, Jenkins RB, et al. Genomic analysis reveals that immune function genes are strongly linked to clinical outcome in the North Central Cancer Treatment Group n9831 Adjuvant Trastuzumab Trial. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 33: 701-8. PMID 25605861 DOI: 10.1200/Jco.2014.57.6298 |
0.319 |
|
| 2015 |
Shreders A, Asmann Y, Wang X, Roy V. Using Whole Exome Sequencing to Identify Genetic Variation and Polymorphisms Associated with Graft Versus Host Disease in Allogeneic Stem Cell Transplant Recipients Blood. 126: 5414-5414. DOI: 10.1182/Blood.V126.23.5414.5414 |
0.321 |
|
| 2015 |
Asmann Y, Sarangi V, Wang C, Maurer MJ, Ansell S, Feldman AL, Nowakowski GS, Habermann TM, Novak AJ, Slager SL, Link BK, Cerhan J. Study of the Subclonal Mutations in Primary Diffuse Large B-Cell Lymphoma Blood. 126: 131-131. DOI: 10.1182/Blood.V126.23.131.131 |
0.354 |
|
| 2015 |
Asmann YW, Wang C, Necela BM, Chen X, Kocher JA, Maurer MJ, Habermann TM, Slager SL, Feldman AL, Novak AJ, Cerhan JR, Perez EA, Thompson EA. Abstract P6-07-03: An exhaustive algorithm for detecting copy number aberrations and large structural variants in whole-genome mate-pair sequencing data Cancer Research. 75. DOI: 10.1158/1538-7445.Sabcs14-P6-07-03 |
0.333 |
|
| 2014 |
Ogaki K, Fujioka S, Heckman MG, Rayaprolu S, Soto-Ortolaza AI, Labbé C, Walton RL, Lorenzo-Betancor O, Wang X, Asmann Y, Rademakers R, Graff-Radford N, Uitti R, Cheshire WP, Wszolek ZK, et al. Analysis of COQ2 gene in multiple system atrophy. Molecular Neurodegeneration. 9: 44. PMID 25373618 DOI: 10.1186/1750-1326-9-44 |
0.362 |
|
| 2014 |
Asmann YW, Maurer MJ, Wang C, Sarangi V, Ansell SM, Feldman AL, Nowakowski GS, Manske M, Price-Troska T, Yang ZZ, Slager SL, Habermann TM, Cerhan JR, Novak AJ. Genetic diversity of newly diagnosed follicular lymphoma. Blood Cancer Journal. 4: e256. PMID 25360902 DOI: 10.1038/Bcj.2014.80 |
0.4 |
|
| 2014 |
Wang C, Davila JI, Baheti S, Bhagwate AV, Wang X, Kocher JP, Slager SL, Feldman AL, Novak AJ, Cerhan JR, Thompson EA, Asmann YW. RVboost: RNA-seq variants prioritization using a boosting method. Bioinformatics (Oxford, England). 30: 3414-6. PMID 25170027 DOI: 10.1093/Bioinformatics/Btu577 |
0.305 |
|
| 2014 |
Wang X, Bledsoe KL, Graham RP, Asmann YW, Viswanatha DS, Lewis JE, Lewis JT, Chou MM, Yaszemski MJ, Jen J, Westendorf JJ, Oliveira AM. Recurrent PAX3-MAML3 fusion in biphenotypic sinonasal sarcoma. Nature Genetics. 46: 666-8. PMID 24859338 DOI: 10.1038/Ng.2989 |
0.304 |
|
| 2014 |
Borad MJ, Champion MD, Egan JB, Liang WS, Fonseca R, Bryce AH, McCullough AE, Barrett MT, Hunt K, Patel MD, Young SW, Collins JM, Silva AC, Condjella RM, Block M, ... ... Asmann Y, et al. Integrated genomic characterization reveals novel, therapeutically relevant drug targets in FGFR and EGFR pathways in sporadic intrahepatic cholangiocarcinoma. Plos Genetics. 10: e1004135. PMID 24550739 DOI: 10.1371/Journal.Pgen.1004135 |
0.366 |
|
| 2014 |
Smallridge RC, Chindris AM, Asmann YW, Casler JD, Serie DJ, Reddi HV, Cradic KW, Rivera M, Grebe SK, Necela BM, Eberhardt NL, Carr JM, McIver B, Copland JA, Aubrey Thompson E. RNA sequencing identifies multiple fusion transcripts, differentially expressed genes, and reduced expression of immune function genes in BRAF (V600E) mutant vs BRAF wild-type papillary thyroid carcinoma. The Journal of Clinical Endocrinology and Metabolism. 99: E338-47. PMID 24297791 DOI: 10.1210/Jc.2013-2792 |
0.357 |
|
| 2014 |
Asmann YW, Wang C, Necela BM, Chen X, Kocher JA, Maurer MJ, Habermann TM, Slager SL, Feldman AL, Dogan A, Novak A, Cerhan JR, Perez EA, Thompson EA. An exhaustive algorithm for detecting copy number aberrations and large structural variants in whole-genome, mate-pair sequencing data. Journal of Clinical Oncology. 32. DOI: 10.1200/Jco.2014.32.15_Suppl.E22171 |
0.336 |
|
| 2014 |
Thompson EA, Necela BM, Carr JM, Kachergus JM, Serie D, Kalari KR, Asmann YW, Perez EA. Identification and targeting of M-phase progression downstream of HER2 in trastuzumab-sensitive and -resistant breast cancer cell lines. Journal of Clinical Oncology. 32: 612-612. DOI: 10.1200/Jco.2014.32.15_Suppl.612 |
0.302 |
|
| 2014 |
Perez EA, Thompson EA, Anderson SK, Asmann YW, Kalari KR, Eckel-Passow J, Dueck AC, Tenner KS, Jen J, Fan J, Geiger X, McCullough AE, Chen B, Zschunke M, Jenkins RB, et al. Association of genomic analysis of immune function genes and clinical outcome in the NCCTG (Alliance) N9831 adjuvant trastuzumab trial. Journal of Clinical Oncology. 32: 509-509. DOI: 10.1200/Jco.2014.32.15_Suppl.509 |
0.32 |
|
| 2014 |
Asmann Y, Maurer MJ, Sarangi V, Ansell SM, Feldman AL, Nowakowski GS, Manske MK, Troska TP, Yang Z, Slager SL, Habermann TM, Cerhan JR, Novak AJ. Genomic Diversity of Newly Diagnosed Follicular Lymphoma: a Pilot Investigation Blood. 124: 1691-1691. DOI: 10.1182/Blood.V124.21.1691.1691 |
0.398 |
|
| 2014 |
Feldman AL, Vasmatzis G, Asmann YW, Johnson SH, Eckloff BW, Middha S, Davila JI, Kurtin PJ, Link BK, Ansell SM, Cerhan JR. Abstract 5585: Integrated DNA/RNA sequencing for discovery and orthogonal validation of expressed fusion genes in peripheral T-cell lymphomas Cancer Research. 74: 5585-5585. DOI: 10.1158/1538-7445.Am2014-5585 |
0.391 |
|
| 2014 |
Davila JI, Starr J, Attia S, Wang C, Wang X, Necela B, John C, Menke D, Sarangi V, Oliver G, Joseph R, Copland J, Parker A, Thompson EA, Smallridge R, ... Asmann YW, et al. Abstract 1894: Extensive genomic profiling of a rare extranodal-follicular dendritic cell sarcoma: Implications for future individualized therapy Cancer Research. 74: 1894-1894. DOI: 10.1158/1538-7445.Am2014-1894 |
0.432 |
|
| 2014 |
Patrick O'Neill B, Braggio E, O'Neill BP, Van Wier S, Ojha J, McPhail E, Asmann Y, Egan J, Ayres da Silva J, Schiff D, Lopes MB, Valdez R, Tibes R, Eckloff B, Stewart AK, et al. GENOME-WIDE ANALYSIS UNCOVERS RECURRENT ALTERATIONS IN PRIMARY CENTRAL NERVOUS SYSTEM LYMPHOMAS (PCNSL) Neuro-Oncology. 16: iii43-iii43. DOI: 10.1093/Neuonc/Nou209.7 |
0.388 |
|
| 2013 |
Norton N, Sun Z, Asmann YW, Serie DJ, Necela BM, Bhagwate A, Jen J, Eckloff BW, Kalari KR, Thompson KJ, Carr JM, Kachergus JM, Geiger XJ, Perez EA, Thompson EA. Gene expression, single nucleotide variant and fusion transcript discovery in archival material from breast tumors. Plos One. 8: e81925. PMID 24278466 DOI: 10.1371/Journal.Pone.0081925 |
0.341 |
|
| 2013 |
Kalari KR, Necela BM, Tang X, Thompson KJ, Lau M, Eckel-Passow JE, Kachergus JM, Anderson SK, Sun Z, Baheti S, Carr JM, Baker TR, Barman P, Radisky DC, Joseph RW, ... ... Asmann YW, et al. An integrated model of the transcriptome of HER2-positive breast cancer. Plos One. 8: e79298. PMID 24223926 DOI: 10.1371/Journal.Pone.0079298 |
0.339 |
|
| 2013 |
Feldman AL, Vasmatzis G, Asmann YW, Davila J, Middha S, Eckloff BW, Johnson SH, Porcher JC, Ansell SM, Caride A. Novel TRAF1-ALK fusion identified by deep RNA sequencing of anaplastic large cell lymphoma. Genes, Chromosomes & Cancer. 52: 1097-102. PMID 23999969 DOI: 10.1002/Gcc.22104 |
0.355 |
|
| 2013 |
Charbonneau B, Wang AH, Maurer MJ, Asmann YW, Zent CS, Link BK, Ansell SM, Weiner GJ, Ozsan N, Feldman AL, Witzig TE, Cunningham JM, Dogan A, Habermann TM, Slager SL, et al. CXCR5 polymorphisms in non-Hodgkin lymphoma risk and prognosis. Cancer Immunology, Immunotherapy : Cii. 62: 1475-84. PMID 23812490 DOI: 10.1007/S00262-013-1452-4 |
0.32 |
|
| 2013 |
DeRycke MS, Gunawardena SR, Middha S, Asmann YW, Schaid DJ, McDonnell SK, Riska SM, Eckloff BW, Cunningham JM, Fridley BL, Serie DJ, Bamlet WR, Cicek MS, Jenkins MA, Duggan DJ, et al. Identification of novel variants in colorectal cancer families by high-throughput exome sequencing. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. 22: 1239-51. PMID 23637064 DOI: 10.1158/1055-9965.Epi-12-1226 |
0.341 |
|
| 2013 |
Slager SL, Achenbach SJ, Asmann YW, Camp NJ, Rabe KG, Goldin LR, Call TG, Shanafelt TD, Kay NE, Cunningham JM, Wang AH, Weinberg JB, Norman AD, Link BK, Leis JF, et al. Mapping of the IRF8 gene identifies a 3'UTR variant associated with risk of chronic lymphocytic leukemia but not other common non-Hodgkin lymphoma subtypes. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. 22: 461-6. PMID 23307532 DOI: 10.1158/1055-9965.Epi-12-1217 |
0.373 |
|
| 2013 |
Wang VW, Laborde RR, Asmann YW, Li Y, Ma J, Eckloff BW, Tombers NM, Olsen SM, Moore EJ, Olsen KD, Smith DI. Search for chromosome rearrangements: new approaches toward discovery of novel translocations in head and neck squamous cell carcinoma. Head & Neck. 35: 831-5. PMID 22807096 DOI: 10.1002/Hed.23037 |
0.316 |
|
| 2013 |
Perez EA, Butler SM, Dueck AC, Baehner FL, Jamshidian F, Cherbavaz DB, Thompson EA, Shak S, Kaufman PA, Davidson NE, Gralow J, Asmann YW, Ballman KV. The relationship between quantitative HER2 gene expression by the 21-gene RT-PCR assay and adjuvant trastuzumab (H) benefit in NCCTG (Alliance) N9831. Journal of Clinical Oncology. 31: 520-520. DOI: 10.1200/Jco.2013.31.15_Suppl.520 |
0.312 |
|
| 2013 |
Ghesquieres H, Slager SL, Jardin F, Veron AS, Novak A, Maurer MJ, Fest T, Habermann TM, Bene MC, Haioun C, Lamy T, Ansell SM, Tilly H, Witzig TE, Feldman AL, ... ... Asmann YW, et al. A Genome-Wide Association Study (GWAS) Of Event-Free Survival In Diffuse Large B-Cell Lymphoma (DLBCL) Treated With Rituximab and Anthracycline-Based Chemotherapy: A Lysa and Iowa/Mayo Clinic SPORE Multistage Study Blood. 122: 76-76. DOI: 10.1182/Blood.V122.21.76.76 |
0.317 |
|
| 2013 |
Novak AJ, Asmann YW, Maurer MJ, Wang C, Slager SL, Hodge LS, Manske M, Price-troska T, Zimmerman M, Ansell SM, Witzig TE, Feldman AL, Dogan A, Link BK, Habermann TM, et al. Whole-Exome Analysis Of DLBCL Tumors Reveals a Unique Genetic Signature Associated With Aggressive Disease Blood. 122: 499-499. DOI: 10.1182/Blood.V122.21.499.499 |
0.386 |
|
| 2013 |
Asmann YW, Sarangi V, Eckloff BW, Cunningham JM, McDonough SJ, Lee YK, Wieben ED, Dogan A, Feldman AL, Slager SL, Cerhan JR, Novak AJ. Comparison Of Single Nucleotide Mutations (SNVs) and Copy Number Variants (CNVs) Detection In Formalin Fixed Paraffin Embedded (FFPE) and Paired Frozen Tumor Tissues Using Target Capture and Sequencing Approach Blood. 122: 1784-1784. DOI: 10.1182/Blood.V122.21.1784.1784 |
0.336 |
|
| 2013 |
Norton N, Perez EA, Asmann YW, Carr JM, Necela BM, Kachergus JM, Jen J, Eckloff BW, Thompson EA. Abstract 2005: Analysis of gene expression and copy number variation in breast tumors using both sequencing and hybridization-based platforms. Cancer Research. 73: 2005-2005. DOI: 10.1158/1538-7445.Am2013-2005 |
0.355 |
|
| 2012 |
Cerhan JR, Fredericksen ZS, Novak AJ, Ansell SM, Kay NE, Liebow M, Dogan A, Cunningham JM, Wang AH, Witzig TE, Habermann TM, Asmann YW, Slager SL. A two-stage evaluation of genetic variation in immune and inflammation genes with risk of non-Hodgkin lymphoma identifies new susceptibility locus in 6p21.3 region. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. 21: 1799-806. PMID 22911334 DOI: 10.1158/1055-9965.Epi-12-0696 |
0.337 |
|
| 2012 |
Fridley BL, Chalise P, Tsai YY, Sun Z, Vierkant RA, Larson MC, Cunningham JM, Iversen ES, Fenstermacher D, Barnholtz-Sloan J, Asmann Y, Risch HA, Schildkraut JM, Phelan CM, Sutphen R, et al. Germline copy number variation and ovarian cancer survival. Frontiers in Genetics. 3: 142. PMID 22891074 DOI: 10.3389/Fgene.2012.00142 |
0.328 |
|
| 2012 |
Vasmatzis G, Johnson SH, Knudson RA, Ketterling RP, Braggio E, Fonseca R, Viswanatha DS, Law ME, Kip NS, Ozsan N, Grebe SK, Frederick LA, Eckloff BW, Thompson EA, Kadin ME, ... ... Asmann YW, et al. Genome-wide analysis reveals recurrent structural abnormalities of TP63 and other p53-related genes in peripheral T-cell lymphomas. Blood. 120: 2280-9. PMID 22855598 DOI: 10.1182/Blood-2012-03-419937 |
0.395 |
|
| 2012 |
Heit JA, Armasu SM, Asmann YW, Cunningham JM, Matsumoto ME, Petterson TM, De Andrade M. A genome-wide association study of venous thromboembolism identifies risk variants in chromosomes 1q24.2 and 9q. Journal of Thrombosis and Haemostasis : Jth. 10: 1521-31. PMID 22672568 DOI: 10.1111/J.1538-7836.2012.04810.X |
0.3 |
|
| 2012 |
Kalari KR, Rossell D, Necela BM, Asmann YW, Nair A, Baheti S, Kachergus JM, Younkin CS, Baker T, Carr JM, Tang X, Walsh MP, Chai HS, Sun Z, Hart SN, et al. Deep Sequence Analysis of Non-Small Cell Lung Cancer: Integrated Analysis of Gene Expression, Alternative Splicing, and Single Nucleotide Variations in Lung Adenocarcinomas with and without Oncogenic KRAS Mutations. Frontiers in Oncology. 2: 12. PMID 22655260 DOI: 10.3389/Fonc.2012.00012 |
0.377 |
|
| 2012 |
Egan JB, Shi CX, Tembe W, Christoforides A, Kurdoglu A, Sinari S, Middha S, Asmann Y, Schmidt J, Braggio E, Keats JJ, Fonseca R, Bergsagel PL, Craig DW, Carpten JD, et al. Whole-genome sequencing of multiple myeloma from diagnosis to plasma cell leukemia reveals genomic initiating events, evolution, and clonal tides. Blood. 120: 1060-6. PMID 22529291 DOI: 10.1182/Blood-2012-01-405977 |
0.361 |
|
| 2012 |
Tschumper RC, Asmann YW, Hossain A, Huddleston PM, Wu X, Dispenzieri A, Eckloff BW, Jelinek DF. Comprehensive assessment of potential multiple myeloma immunoglobulin heavy chain V-D-J intraclonal variation using massively parallel pyrosequencing. Oncotarget. 3: 502-13. PMID 22522905 DOI: 10.18632/Oncotarget.469 |
0.347 |
|
| 2012 |
Asmann YW, Necela BM, Kalari KR, Hossain A, Baker TR, Carr JM, Davis C, Getz JE, Hostetter G, Li X, McLaughlin SA, Radisky DC, Schroth GP, Cunliffe HE, Perez EA, et al. Detection of redundant fusion transcripts as biomarkers or disease-specific therapeutic targets in breast cancer. Cancer Research. 72: 1921-8. PMID 22496456 DOI: 10.1158/0008-5472.Can-11-3142 |
0.322 |
|
| 2012 |
Lohr JG, Stojanov P, Lawrence MS, Auclair D, Chapuy B, Sougnez C, Cruz-Gordillo P, Knoechel B, Asmann YW, Slager SL, Novak AJ, Dogan A, Ansell SM, Link BK, Zou L, et al. Discovery and prioritization of somatic mutations in diffuse large B-cell lymphoma (DLBCL) by whole-exome sequencing. Proceedings of the National Academy of Sciences of the United States of America. 109: 3879-84. PMID 22343534 DOI: 10.1073/Pnas.1121343109 |
0.34 |
|
| 2012 |
Asmann YW, Middha S, Hossain A, Baheti S, Li Y, Chai HS, Sun Z, Duffy PH, Hadad AA, Nair A, Liu X, Zhang Y, Klee EW, Kalari KR, Kocher JP. TREAT: a bioinformatics tool for variant annotations and visualizations in targeted and exome sequencing data. Bioinformatics (Oxford, England). 28: 277-8. PMID 22088845 DOI: 10.1093/Bioinformatics/Btr612 |
0.32 |
|
| 2012 |
Charbonneau B, Wang AH, Novak AJ, Ansell SM, Feldman AL, Asmann YW, Cunningham JM, Maurer MJ, Dogan A, Habermann TM, Link BK, Slager SL, Cerhan JR. CXCR5 Polymorphisms in Non-Hodgkin Lymphoma (NHL) Risk and Prognosis. Blood. 120: 2702-2702. DOI: 10.1182/Blood.V120.21.2702.2702 |
0.322 |
|
| 2012 |
Kalari KR, Chai H, Asmann YW, Tang X, Rossell D, Baheti S, Nair A, Baker TR, Necela BM, Carr JM, Hart SN, Sun Z, Kachergus JM, Younkin CS, Kocher JA, et al. Abstract 4926: Modeling the transcriptome landscape of HER2+ breast cancer Cancer Research. 72: 4926-4926. DOI: 10.1158/1538-7445.Am2012-4926 |
0.39 |
|
| 2012 |
Wang VW, Laborde RR, Asmann YW, Li Y, Ma J, Eckloff BW, Tombers NM, Olsen SM, Moore EJ, Olsen KD, Smith DI. Abstract 3100: Identifying novel chromosomal fusions out of RNAseq data from oropharyngeal cancers Cancer Research. 72: 3100-3100. DOI: 10.1158/1538-7445.Am2012-3100 |
0.371 |
|
| 2012 |
Perez E, Eckel-Passow J, Ballman K, Anderson S, Thompson E, Asmann Y, Jen J, Dueck A, Lingle W, Sledge G, Winer E, Gralow J, Jenkins R, Reinholz M. Abstract PD10-04: Predictive genomic markers to chemotherapy and adjuvant trastuzumab via whole genome expression DASL profiling in the N9831 adjuvant study Cancer Research. 72. DOI: 10.1158/0008-5472.Sabcs12-Pd10-04 |
0.347 |
|
| 2011 |
Brisbin AG, Asmann YW, Song H, Tsai YY, Aakre JA, Yang P, Jenkins RB, Pharoah P, Schumacher F, Conti DV, Duggan DJ, Jenkins M, Hopper J, Gallinger S, Newcomb P, et al. Meta-analysis of 8q24 for seven cancers reveals a locus between NOV and ENPP2 associated with cancer development. Bmc Medical Genetics. 12: 156. PMID 22142333 DOI: 10.1186/1471-2350-12-156 |
0.332 |
|
| 2011 |
Wang X, Asmann YW, Erickson-Johnson MR, Oliveira JL, Zhang H, Moura RD, Lazar AJ, Lev D, Bill K, Lloyd RV, Yaszemski MJ, Maran A, Oliveira AM. High-resolution genomic mapping reveals consistent amplification of the fibroblast growth factor receptor substrate 2 gene in well-differentiated and dedifferentiated liposarcoma. Genes, Chromosomes & Cancer. 50: 849-58. PMID 21793095 DOI: 10.1002/Gcc.20906 |
0.363 |
|
| 2011 |
Asmann YW, Hossain A, Necela BM, Middha S, Kalari KR, Sun Z, Chai HS, Williamson DW, Radisky D, Schroth GP, Kocher JP, Perez EA, Thompson EA. A novel bioinformatics pipeline for identification and characterization of fusion transcripts in breast cancer and normal cell lines. Nucleic Acids Research. 39: e100. PMID 21622959 DOI: 10.1093/Nar/Gkr362 |
0.331 |
|
| 2011 |
Sun Z, Asmann YW, Kalari KR, Bot B, Eckel-Passow JE, Baker TR, Carr JM, Khrebtukova I, Luo S, Zhang L, Schroth GP, Perez EA, Thompson EA. Integrated analysis of gene expression, CpG island methylation, and gene copy number in breast cancer cells by deep sequencing. Plos One. 6: e17490. PMID 21364760 DOI: 10.1371/Journal.Pone.0017490 |
0.376 |
|
| 2011 |
Byrne GW, Du Z, Sun Z, Asmann YW, McGregor CG. Changes in cardiac gene expression after pig-to-primate orthotopic xenotransplantation. Xenotransplantation. 18: 14-27. PMID 21342284 DOI: 10.1111/J.1399-3089.2010.00620.X |
0.336 |
|
| 2011 |
Asmann YW, Andrade Md, Middha S, Matsumoto ME, Armasu SM, Petterson TM, Cunningham JM, Heit JA. Identification of Venous Thromboembolism (VTE)-Associated Novel Variants in the ABO Gene Using Targeted Deep Sequencing Blood. 118: 709-709. DOI: 10.1182/Blood.V118.21.709.709 |
0.336 |
|
| 2011 |
Tschumper RC, Asmann YW, Hossain A, Huddleston PM, Wu X, Dispenzieri A, Eckloff BW, Jelinek DF. Assessment of Multiple Myeloma IGHV Intraclonal Variation by Massively Parallel Pyrosequencing Blood. 118: 1814-1814. DOI: 10.1182/Blood.V118.21.1814.1814 |
0.345 |
|
| 2011 |
Heit JA, Armasu SM, Matsumoto ME, Petterson TM, Rider DN, Cunningham JM, Asmann YW, Andrade Md. Association of Gene-Environment Interactions with Venous Thromboembolism (VTE): A Merged/Imputed Genome-Wide Scan/Candidate-Gene Case-Control Study Blood. 118: 1242-1242. DOI: 10.1182/Blood.V118.21.1242.1242 |
0.326 |
|
| 2011 |
Thompson EA, Asmann YW, Necela BM, Kalari KR, Williamson DW, Carr JM, Baker TR, Schroth GP, Kocher JA, Perez EA. Abstract LB-276: Fusion transcripts in breast cancer cell lines and tumors Cancer Research. 71. DOI: 10.1158/1538-7445.Am2011-Lb-276 |
0.355 |
|
| 2011 |
Kalari KR, Rossell D, Asmann Y, Nair A, Baker T, Carr J, Chai H, Hossain A, Sun Z, Li Y, Middha S, Bot B, Passow JE, Kocher J, Perez E, et al. Abstract 4975: Next generation sequencing reveals a connection between KRAS mutation and the NFkB pathway in lung adenocarcinoma samples Cancer Research. 71: 4975-4975. DOI: 10.1158/1538-7445.Am2011-4975 |
0.37 |
|
| 2011 |
Sun Z, Asmann YW, Kalari KR, Bot B, Eckel-Passow JE, Baker TR, Carr JM, Khrebtukova I, Luo S, Zhang L, Schroth GP, Perez EA, Thompson EA. Abstract 4908: Deep sequence analysis of the relationship between gene expression, CpG island methylation, and gene copy number in breast cancer cells Cancer Research. 71: 4908-4908. DOI: 10.1158/1538-7445.Am2011-4908 |
0.375 |
|
| 2011 |
DeRycke MS, Gunawardena SR, Middha S, McDonnell SK, Eckloff BW, Asmann YW, Schaid DJ, Goode EL, Thibodeau SN. Abstract 2742: Assessment of next generation platforms and use of duplicate runs for whole exome sequencing Cancer Research. 71: 2742-2742. DOI: 10.1158/1538-7445.Am2011-2742 |
0.305 |
|
| 2011 |
Thompson E, Asmann Y, Necela B, Andorfer C, Cunliffe H, Hossain A, Getz J, Hostetter G, Schroth G, Perez E. P3-06-02: Identification of Redundant, Tumor Subtype Specific Fusion Transcripts in Primary Breast Tumors. Cancer Research. 71. DOI: 10.1158/0008-5472.Sabcs11-P3-06-02 |
0.334 |
|
| 2010 |
Reinholz MM, Eckel-Passow JE, Anderson SK, Asmann YW, Zschunke MA, Oberg AL, McCullough AE, Dueck AC, Chen B, April CS, Wickham-Garcia E, Jenkins RB, Cunningham JM, Jen J, Perez EA, et al. Expression profiling of formalin-fixed paraffin-embedded primary breast tumors using cancer-specific and whole genome gene panels on the DASL® platform. Bmc Medical Genomics. 3: 60. PMID 21172013 DOI: 10.1186/1755-8794-3-60 |
0.348 |
|
| 2010 |
Plager DA, Kahl JC, Asmann YW, Nilson AE, Pallanch JF, Friedman O, Kita H. Gene transcription changes in asthmatic chronic rhinosinusitis with nasal polyps and comparison to those in atopic dermatitis. Plos One. 5: e11450. PMID 20625511 DOI: 10.1371/Journal.Pone.0011450 |
0.361 |
|
| 2010 |
Tuch BB, Laborde RR, Xu X, Gu J, Chung CB, Monighetti CK, Stanley SJ, Olsen KD, Kasperbauer JL, Moore EJ, Broomer AJ, Tan R, Brzoska PM, Muller MW, Siddiqui AS, ... Asmann YW, et al. Tumor transcriptome sequencing reveals allelic expression imbalances associated with copy number alterations. Plos One. 5: e9317. PMID 20174472 DOI: 10.1371/Journal.Pone.0009317 |
0.411 |
|
| 2010 |
Cooper LT, Onuma OK, Sagar S, Oberg AL, Mahoney DW, Asmann YW, Liu P. Genomic and proteomic analysis of myocarditis and dilated cardiomyopathy. Heart Failure Clinics. 6: 75-85. PMID 19945063 DOI: 10.1016/J.Hfc.2009.08.012 |
0.303 |
|
| 2009 |
Asmann YW, Klee EW, Thompson EA, Perez EA, Middha S, Oberg AL, Therneau TM, Smith DI, Poland GA, Wieben ED, Kocher JP. 3' tag digital gene expression profiling of human brain and universal reference RNA using Illumina Genome Analyzer. Bmc Genomics. 10: 531. PMID 19917133 DOI: 10.1186/1471-2164-10-531 |
0.311 |
|
| 2009 |
Erickson-Johnson MR, Seys AR, Roth CW, King AA, Hulshizer RL, Wang X, Asmann YW, Lloyd RV, Jacob EK, Oliveira AM. Carboxypeptidase M: a biomarker for the discrimination of well-differentiated liposarcoma from lipoma. Modern Pathology : An Official Journal of the United States and Canadian Academy of Pathology, Inc. 22: 1541-7. PMID 19820690 DOI: 10.1038/Modpathol.2009.149 |
0.307 |
|
| 2009 |
Wang L, Oberg AL, Asmann YW, Sicotte H, McDonnell SK, Riska SM, Liu W, Steer CJ, Subramanian S, Cunningham JM, Cerhan JR, Thibodeau SN. Genome-wide transcriptional profiling reveals microRNA-correlated genes and biological processes in human lymphoblastoid cell lines. Plos One. 4: e5878. PMID 19517021 DOI: 10.1371/Journal.Pone.0005878 |
0.318 |
|
| 2009 |
Chai HS, Sicotte H, Bailey KR, Turner ST, Asmann YW, Kocher JP. GLOSSI: a method to assess the association of genetic loci-sets with complex diseases. Bmc Bioinformatics. 10: 102. PMID 19344520 DOI: 10.1186/1471-2105-10-102 |
0.322 |
|
| 2009 |
Starr TK, Allaei R, Silverstein KA, Staggs RA, Sarver AL, Bergemann TL, Gupta M, O'Sullivan MG, Matise I, Dupuy AJ, Collier LS, Powers S, Oberg AL, Asmann YW, Thibodeau SN, et al. A transposon-based genetic screen in mice identifies genes altered in colorectal cancer. Science (New York, N.Y.). 323: 1747-50. PMID 19251594 DOI: 10.1126/Science.1163040 |
0.311 |
|
| 2008 |
Rodriguez FJ, Giannini C, Asmann YW, Sharma MK, Perry A, Tibbetts KM, Jenkins RB, Scheithauer BW, Anant S, Jenkins S, Eberhart CG, Sarkaria JN, Gutmann DH. Gene expression profiling of NF-1-associated and sporadic pilocytic astrocytoma identifies aldehyde dehydrogenase 1 family member L1 (ALDH1L1) as an underexpressed candidate biomarker in aggressive subtypes. Journal of Neuropathology and Experimental Neurology. 67: 1194-204. PMID 19018242 DOI: 10.1097/Nen.0B013E31818Fbe1E |
0.317 |
|
| 2008 |
Nakagawa T, Kollmeyer TM, Morlan BW, Anderson SK, Bergstralh EJ, Davis BJ, Asmann YW, Klee GG, Ballman KV, Jenkins RB. A tissue biomarker panel predicting systemic progression after PSA recurrence post-definitive prostate cancer therapy. Plos One. 3: e2318. PMID 18846227 DOI: 10.1371/Journal.Pone.0002318 |
0.304 |
|
| 2008 |
Rajagopalan G, Asmann YW, Lytle AK, Tilahun AY, Theuer JE, Smart MK, Patel R, David CS. Cyclooxygenase 2 pathway and its therapeutic inhibition in superantigen-induced toxic shock. Shock (Augusta, Ga.). 30: 721-8. PMID 18496243 DOI: 10.1097/Shk.0B013E31817048F7 |
0.316 |
|
| 2006 |
Wang X, Allen M, Carrasquillo MM, Burgess JD, Li S, Asmann YW, Ertekin-Taner N. P4-049: IDENTIFICATION OF CELL-SPECIFIC DIFFERENTIALLY EXPRESSED GENES IN ALZHEIMER'S DISEASE Alzheimer's & Dementia. 14: P1452-P1452. DOI: 10.1016/J.Jalz.2018.06.2451 |
0.331 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2016 |
Allen M, Wang X, Burgess JD, Nguyen T, Malphrus KG, Nho K, Serie D, Strickland SL, Lincoln S, Carrasquillo MM, Crook JE, Schellenberg GD, Knopman DS, Saykin AJ, Lowe VJ, ... ... Asmann YW, et al. Blood Gene Expression Changes Implicated In Alzheimer’S Disease Alzheimers & Dementia. 12: 448. DOI: 10.1016/J.Jalz.2016.06.865 |
0.299 |
|
| 2017 |
Paulus A, Akhtar S, Yousaf H, Manna A, Paulus SM, Bashir Y, Caulfield TR, Kuranz-Blake M, Chitta K, Wang X, Asmann Y, Hudec R, Springer W, Ailawadhi S, Chanan-Khan A. Waldenstrom macroglobulinemia cells devoid of BTK(C481S) or CXCR4(WHIM-like) mutations acquire resistance to ibrutinib through upregulation of Bcl-2 and AKT resulting in vulnerability towards venetoclax or MK2206 treatment. Blood Cancer Journal. 7: e565. PMID 28548645 DOI: 10.1038/Bcj.2017.40 |
0.299 |
|
| 2017 |
Carrasquillo MM, Ho CC, Nsongo A, Wang X, Burgess JD, Nguyen T, Ma L, Bisceglio GD, Lincoln SJ, Malphrus KG, Asmann YW, Younkin SG, Duara R, Greig Custo MT, Graff-Radford NR, et al. [P3-096]: NOVEL CANDIDATE AD-RISK LOCI IDENTIFIED THROUGH WHOLE EXOME SEQUENCING IN AFRICAN-AMERICANS Alzheimer's & Dementia. 13: P971-P971. DOI: 10.1016/J.Jalz.2017.06.1306 |
0.298 |
|
| 2015 |
Allen M, Wang X, Serie D, Strickland SL, Burgess JD, Nguyen T, Malphrus KG, Lincoln S, Carrasquillo MM, Crook J, Schellenberg GD, Knopman DS, Lowe VJ, Jack CR, Younkin SG, ... Asmann YW, et al. Exploiting blood transcriptome for gene and pathway identification in Alzheimer's disease Alzheimers & Dementia. 11: 357. DOI: 10.1016/J.Jalz.2015.06.245 |
0.298 |
|
| 2016 |
Chesi M, Mirza NN, Garbitt VM, Sharik ME, Dueck AC, Asmann YW, Akhmetzyanova I, Kosiorek HE, Calcinotto A, Riggs DL, Keane N, Ahmann GJ, Morrison KM, Fonseca R, Lacy MQ, et al. IAP antagonists induce anti-tumor immunity in multiple myeloma. Nature Medicine. PMID 27841872 DOI: 10.1038/Nm.4229 |
0.297 |
|
| 2017 |
Serie DJ, Crook JE, Necela BM, Dockter TJ, Wang X, Asmann YW, Fairweather D, Bruno KA, Colon-Otero G, Perez EA, Thompson EA, Norton N. Genome-wide association study of cardiotoxicity in the NCCTG N9831 (Alliance) adjuvant trastuzumab trial. Pharmacogenetics and Genomics. PMID 28763429 DOI: 10.1097/Fpc.0000000000000302 |
0.296 |
|
| 2013 |
Kalari KR, Necela BM, Tang X, Thompson KJ, Lau M, Eckel-Passow JE, Kachergus JM, Anderson SK, Sun Z, Baheti S, Carr JM, Baker TR, Barman P, Radisky DC, Joseph RW, ... ... Asmann YW, et al. CASPER plots for 2 genes. Plos One. DOI: 10.1371/Journal.Pone.0079298.G006 |
0.296 |
|
| 2014 |
Kalari KR, Nair AA, Bhavsar JD, O'Brien DR, Davila JI, Bockol MA, Nie J, Tang X, Baheti S, Doughty JB, Middha S, Sicotte H, Thompson AE, Asmann YW, Kocher JP. MAP-RSeq: Mayo Analysis Pipeline for RNA sequencing. Bmc Bioinformatics. 15: 224. PMID 24972667 DOI: 10.1186/1471-2105-15-224 |
0.296 |
|
| 2016 |
Miller A, Cattaneo L, Asmann YW, Braggio E, Keats JJ, Auclair D, Lonial S, Russell SJ, Stewart AK. Correlation Between Somatic Mutation Burden, Neoantigen Load and Progression Free Survival in Multiple Myeloma: Analysis of MMRF CoMMpass Study Blood. 128: 193-193. DOI: 10.1182/Blood.V128.22.193.193 |
0.296 |
|
| 2006 |
Reddy JS, Allen M, Wang X, Biernacka JM, Gregory JD, Toral SM, McDonnell SK, Sarangi V, Sinnwell JP, Asmann YW, Carrasquillo MM, Pottier CP, Ren Y, Younkin CS, Rademakers R, et al. O3-06-02: POLYGENIC SCORE ANALYSIS OF EXONIC VARIANTS IN AN IMMUNE CO-REGULATORY NETWORK IDENTIFIES NOVEL PROTEIN-ALTERING VARIANTS THAT ASSOCIATE WITH ALZHEIMER'S DISEASE Alzheimer's & Dementia. 14: P1025-P1026. DOI: 10.1016/J.Jalz.2018.06.2801 |
0.295 |
|
| 2007 |
Titapiwatanakun R, Guenther JC, Asmann YW, Daniels TM, Heit JA, Nichols WL, Pruthi RK. Novel Mutations in Types 2 & 3 von Willebrand Disease and Correlation with von Willebrand Factor Multimer Patterns. Blood. 110: 2136-2136. DOI: 10.1182/Blood.V110.11.2136.2136 |
0.295 |
|
| 2014 |
Wang C, Evans JM, Bhagwate AV, Prodduturi N, Sarangi V, Middha M, Sicotte H, Vedell PT, Hart SN, Oliver GR, Kocher JP, Maurer MJ, Novak AJ, Slager SL, Cerhan JR, ... Asmann YW, et al. PatternCNV: a versatile tool for detecting copy number changes from exome sequencing data. Bioinformatics (Oxford, England). 30: 2678-80. PMID 24876377 DOI: 10.1093/Bioinformatics/Btu363 |
0.295 |
|
| 2016 |
Nsongo A, Carrasquillo MM, Wang X, Burgess JD, Nguyen T, Asmann YW, Younkin SG, Graff-Radford NR, Ertekin-Taner N. P2-079: Assessment of The Known and Candidate Alzheimer's Disease Genes in African-Americans Alzheimer's & Dementia. 12: P639-P639. DOI: 10.1016/J.Jalz.2016.06.1284 |
0.294 |
|
| 2017 |
Miller A, Asmann Y, Cattaneo L, Braggio E, Keats J, Auclair D, Lonial S, Russell SJ, Stewart AK. High somatic mutation and neoantigen burden are correlated with decreased progression-free survival in multiple myeloma. Blood Cancer Journal. 7: e612. PMID 28937974 DOI: 10.1038/Bcj.2017.94 |
0.294 |
|
| 2012 |
Cerhan JR, Nowakowski GS, Maurer MJ, Charbonneau B, Ghesquieres H, Novak AJ, Asmann YW, Dogan A, Markovic SN, Thompson CA, Ansell SM, Weiner GJ, Link BK, Habermann TM, Slager SL. Germline Genetic Variation and Risk of Follicular Lymphoma Transformation in the Modern Treatment Era Blood. 120: 149-149. DOI: 10.1182/Blood.V120.21.149.149 |
0.294 |
|
| 2013 |
Kalari KR, Necela BM, Tang X, Thompson KJ, Lau M, Eckel-Passow JE, Kachergus JM, Anderson SK, Sun Z, Baheti S, Carr JM, Baker TR, Barman P, Radisky DC, Joseph RW, ... ... Asmann YW, et al. Clustering of genes uniquely expressed in HER2 tumors. Plos One. DOI: 10.1371/Journal.Pone.0079298.G005 |
0.294 |
|
| 2019 |
Hartert KT, Wenzl K, Krull J, Manske M, Sarangi V, Asmann Y, Larson MC, Maurer MJ, Slager SL, Macon WR, King RL, Feldman AL, Gandhi AK, Link BK, Habermann TM, et al. Genomic Analysis of R2CHOP-Treated DLBCL Reveals a High-Risk Population Driven By Inflammatory Pathways Blood. 134: 1480-1480. DOI: 10.1182/Blood-2019-126860 |
0.292 |
|
| 2015 |
Allen M, Wang X, Younkin CS, Burgess JD, Ballard T, Serie D, Wang C, Sun Z, Baheti S, Carrasquillo MM, Nguyen T, Malphrus KG, Lincoln S, Zou F, Chai H, ... ... Asmann YW, et al. P2-025: Genetic and epigenetic influences on brain gene expression in psp Alzheimer's & Dementia. 11: P490-P491. DOI: 10.1016/J.Jalz.2015.06.561 |
0.292 |
|
| 2012 |
Ghesquieres H, Larrabee BR, Casasnovas O, Maurer MJ, Ansell SM, Verney A, Slager SL, Brice P, Allmer C, Morschhauser F, Habermann TM, Gaillard I, Asmann YW, Link BK, Stamatoullas A, et al. Prognostic Value of Six Germline Single Nucleotide Polymorphisms At the REL, HLA-DRA, GATA3 and PVT1 Loci Identified in a Classical Hodgkin Lymphoma Genome-Wide Association Study: A Meta-Analysis of 601 Patients for Progression-Free Survival From Two Independent Studies Blood. 120: 3637-3637. DOI: 10.1182/Blood.V120.21.3637.3637 |
0.291 |
|
| 2019 |
Yamazaki Y, Shinohara M, Yamazaki A, Ren Y, Asmann YW, Kanekiyo T, Bu G. ApoE (Apolipoprotein E) in Brain Pericytes Regulates Endothelial Function in an Isoform-Dependent Manner by Modulating Basement Membrane Components. Arteriosclerosis, Thrombosis, and Vascular Biology. ATVBAHA119313169. PMID 31665905 DOI: 10.1161/Atvbaha.119.313169 |
0.29 |
|
| 2016 |
Holst F, Hoivik EA, Gibson WJ, Taylor-Weiner A, Schumacher SE, Asmann YW, Grossmann P, Trovik J, Necela BM, Thompson EA, Meyerson M, Beroukhim R, Salvesen HB, Cherniack AD. Recurrent hormone-binding domain truncated ESR1 amplifications in primary endometrial cancers suggest their implication in hormone independent growth. Scientific Reports. 6: 25521. PMID 27160768 DOI: 10.1038/Srep25521 |
0.29 |
|
| 2017 |
Wang Y, Wenzl K, Maurer MJ, Asmann YW, Slager SL, Witzig TE, Ansell SM, Feldman AL, Link BK, Nowakowski GS, Cerhan JR, Novak AJ. Clinical Characteristics and Outcome of Diffuse Large B-Cell Lymphoma with 9p24.1 Copy Number Alterations Blood. 130: 196-196. DOI: 10.1182/Blood.V130.Suppl_1.196.196 |
0.288 |
|
| 2009 |
Haluska P, Carboni J, Asmann Y, Eyck CT, Attar R, Tibodeau J, Hou X, Nakanishi T, Ross D, Kaufmann S, Gottardis M, Erlichman C. Drug efflux by breast cancer resistance protein (BCRP) is a mechanism of resistance to the insulin-like growth factor receptor/insulin receptor inhibitor, BMS-536924. Cancer Research. 69: 2149. DOI: 10.1158/0008-5472.Sabcs-2149 |
0.286 |
|
| 2009 |
Rule AD, Fridley BL, Hunt SC, Asmann Y, Boerwinkle E, Pankow JS, Mosley TH, Turner ST. Genome-wide linkage analysis for uric acid in families enriched for hypertension Nephrology Dialysis Transplantation. 24: 2414-2420. PMID 19258383 DOI: 10.1093/Ndt/Gfp080 |
0.286 |
|
| 2018 |
Lorenzo-Betancor O, Blackburn PR, Edwards E, Vázquez-do-Campo R, Klee EW, Labbé C, Hodges K, Glover P, Sigafoos AN, Soto AI, Walton RL, Doxsey S, Bober MB, Jennings S, Clark KJ, ... Asmann Y, et al. point mutations and familial intracranial aneurysms. Neurology. PMID 30413633 DOI: 10.1212/Wnl.0000000000006614 |
0.283 |
|
| 2019 |
Wang Y, Wenzl K, Manske MK, Asmann YW, Sarangi V, Greipp PT, Krull JE, Hartert K, He R, Feldman AL, Maurer MJ, Slager SL, Nowakowski GS, Habermann TM, Witzig TE, et al. Amplification of 9p24.1 in diffuse large B-cell lymphoma identifies a unique subset of cases that resemble primary mediastinal large B-cell lymphoma. Blood Cancer Journal. 9: 73. PMID 31471540 DOI: 10.1038/S41408-019-0233-5 |
0.283 |
|
| 2006 |
Allen M, Bredenberg JM, Reddy JS, Sarangi V, Carrasquillo MM, Wang X, Lincoln SJ, Nguyen T, Malphrus KG, Dickson DW, Asmann YW, Ertekin-Taner N. P3-129: MAPPING FUNCTIONAL REGULATORY VARIANTS AT ALZHEIMER'S DISEASE RISK LOCI Alzheimer's & Dementia. 14: P1117-P1117. DOI: 10.1016/J.Jalz.2018.06.1486 |
0.28 |
|
| 2011 |
Hou X, Huang F, Carboni JM, Flatten K, Asmann YW, Ten Eyck C, Nakanishi T, Tibodeau JD, Ross DD, Gottardis MM, Erlichman C, Kaufmann SH, Haluska P. Drug efflux by breast cancer resistance protein is a mechanism of resistance to the benzimidazole insulin-like growth factor receptor/insulin receptor inhibitor, BMS-536924. Molecular Cancer Therapeutics. 10: 117-25. PMID 21220496 DOI: 10.1158/1535-7163.Mct-10-0438 |
0.28 |
|
| 2011 |
Dong J, Sutor S, Jiang G, Cao Y, Asmann YW, Wigle DA. c-Myc regulates self-renewal in bronchoalveolar stem cells. Plos One. 6: e23707. PMID 21858211 DOI: 10.1371/Journal.Pone.0023707 |
0.279 |
|
| 2014 |
Johnson ML, Lanza IR, Short DK, Asmann YW, Nair KS. Chronically endurance-trained individuals preserve skeletal muscle mitochondrial gene expression with age but differences within age groups remain. Physiological Reports. 2. PMID 25524277 DOI: 10.14814/Phy2.12239 |
0.276 |
|
| 2019 |
Aikawa T, Ren Y, Yamazaki Y, Tachibana M, Johnson MR, Anderson CT, Martens YA, Holm ML, Asmann YW, Saito T, Saido TC, Fitzgerald ML, Bu G, Kanekiyo T. ABCA7 haplodeficiency disturbs microglial immune responses in the mouse brain. Proceedings of the National Academy of Sciences of the United States of America. PMID 31690660 DOI: 10.1073/Pnas.1908529116 |
0.275 |
|
| 2018 |
Baughn LB, Pearce K, Larson D, Polley MY, Elhaik E, Baird M, Colby C, Benson J, Li Z, Asmann Y, Therneau T, Cerhan JR, Vachon CM, Stewart AK, Bergsagel PL, et al. Differences in genomic abnormalities among African individuals with monoclonal gammopathies using calculated ancestry. Blood Cancer Journal. 8: 96. PMID 30305608 DOI: 10.1038/S41408-018-0132-1 |
0.274 |
|
| 2012 |
Kelly JL, Drake MT, Fredericksen ZS, Asmann YW, Liebow M, Shanafelt TD, Feldman AL, Ansell SM, Macon WR, Herr MM, Wang AH, Nowakowski GS, Call TG, Habermann TM, Slager SL, et al. Early life sun exposure, vitamin D-related gene variants, and risk of non-Hodgkin lymphoma. Cancer Causes & Control : Ccc. 23: 1017-29. PMID 22544453 DOI: 10.1007/S10552-012-9967-0 |
0.274 |
|
| 2011 |
Middha S, Asmann YW, Hossain A, Baheti S, Li Y, Chai H, Sun Z, Duffy PH, Hadad AA, Nair A, Liu X, Zhang Y, Klee EW, Kocher JA. TREAT: A comprehensive open framework for targeted re-sequencing analysis F1000research. 2. DOI: 10.7490/F1000Research.892.1 |
0.274 |
|
| 2014 |
Allen M, Serie D, Sun Z, Baheti S, Walsh M, Zou F, Chai HS, Younkin C, Siuda J, Burgess J, Crook J, Pancratz VS, Carrasquillo MM, Nair A, Middha S, ... ... Asmann Y, et al. O3-04-06: GENE EXPRESSION PROFILING AND DNA METHYLATION IN ALZHEIMER'S DISEASE BRAINS Alzheimer's & Dementia. 10: P216-P216. DOI: 10.1016/J.Jalz.2014.04.291 |
0.273 |
|
| 2012 |
Sun Z, Baheti S, Middha S, Kanwar R, Zhang Y, Li X, Beutler AS, Klee E, Asmann YW, Thompson EA, Kocher JP. SAAP-RRBS: streamlined analysis and annotation pipeline for reduced representation bisulfite sequencing. Bioinformatics (Oxford, England). 28: 2180-1. PMID 22689387 DOI: 10.1093/Bioinformatics/Bts337 |
0.273 |
|
| 2020 |
Zhao N, Attrebi ON, Ren Y, Qiao W, Sonustun B, Martens YA, Meneses AD, Li F, Shue F, Zheng J, Van Ingelgom AJ, Davis MD, Kurti A, Knight JA, Linares C, ... ... Asmann YW, et al. APOE4 exacerbates α-synuclein pathology and related toxicity independent of amyloid. Science Translational Medicine. 12. PMID 32024798 DOI: 10.1126/Scitranslmed.Aay1809 |
0.271 |
|
| 2004 |
Nair KS, Jaleel A, Asmann YW, Short KR, Raghavakaimal S. Proteomic research: potential opportunities for clinical and physiological investigators. American Journal of Physiology. Endocrinology and Metabolism. 286: E863-74. PMID 15140753 DOI: 10.1152/Ajpendo.00370.2003 |
0.271 |
|
| 2019 |
Ahmed AE, Heldenbrand J, Asmann Y, Fadlelmola FM, Katz DS, Kendig K, Kendzior MC, Li T, Ren Y, Rodriguez E, Weber MR, Wozniak JM, Zermeno J, Mainzer LS. Managing genomic variant calling workflows with Swift/T. Plos One. 14: e0211608. PMID 31287816 DOI: 10.1371/Journal.Pone.0211608 |
0.269 |
|
| 2019 |
Ortiz M, Wenzl K, Stokes M, Huang CC, Maurer MJ, Towfic F, Hagner PR, Ratushny A, McConnell M, Danziger SA, Stong N, Lata S, Kamalakaran S, Mavrommatis K, Trotter M, ... ... Asmann Y, et al. Clustering of Transcriptomic Signatures in Newly Diagnosed Diffuse Large B-Cell Lymphoma Identifies Two High-Risk Subgroups Which Increase in Prevalence at Relapse Blood. 134: 923-923. DOI: 10.1182/Blood-2019-122756 |
0.268 |
|
| 2008 |
Ajayi F, Kongoasa N, Gaffey T, Asmann YW, Watson WJ, Baldi A, Lala P, Shridhar V, Brost B, Chien J. Elevated expression of serine protease HtrA1 in preeclampsia and its role in trophoblast cell migration and invasion. American Journal of Obstetrics and Gynecology. 199: 557.e1-10. PMID 18667191 DOI: 10.1016/J.Ajog.2008.04.046 |
0.267 |
|
| 2007 |
Karakelides H, Asmann YW, Bigelow ML, Short KR, Dhatariya K, Coenen-Schimke J, Kahl J, Mukhopadhyay D, Nair KS. Effect of insulin deprivation on muscle mitochondrial ATP production and gene transcript levels in type 1 diabetic subjects. Diabetes. 56: 2683-9. PMID 17660267 DOI: 10.2337/Db07-0378 |
0.266 |
|
| 2008 |
Asmann YW, Wallace MB, Thompson EA. Transcriptome profiling using next-generation sequencing. Gastroenterology. 135: 1466-8. PMID 18848555 DOI: 10.1053/J.Gastro.2008.09.042 |
0.264 |
|
| 2018 |
Zhao Y, Wang J, Liang F, Liu Y, Wang Q, Zhang H, Jiang M, Zhang Z, Zhao W, Bao Y, Zhang Z, Wu J, Asmann YW, Li R, Xiao J. NucMap: a database of genome-wide nucleosome positioning map across species. Nucleic Acids Research. PMID 30335176 DOI: 10.1093/Nar/Gky980 |
0.264 |
|
| 2017 |
Stein CK, Asmann Y, Bergsagel PL. Identifying High-Risk Phenotypes Using Three-Way Feature Interactions in Multiple Myeloma: An Analysis of Publically Available Mmrf Commpass Study Blood. 130: 3034-3034. DOI: 10.1182/Blood.V130.Suppl_1.3034.3034 |
0.264 |
|
| 2012 |
Dong J, Carey WA, Abel S, Collura C, Jiang G, Tomaszek S, Sutor S, Roden AC, Asmann YW, Prakash YS, Wigle DA. MicroRNA-mRNA interactions in a murine model of hyperoxia-induced bronchopulmonary dysplasia. Bmc Genomics. 13: 204. PMID 22646479 DOI: 10.1186/1471-2164-13-204 |
0.262 |
|
| 2018 |
Baughn LB, Larson D, Polley M, Pearce KE, Elhaik E, Baird ML, Colby C, Benson J, Li Z, Asmann Y, Therneau T, Cerhan JR, Vachon CM, Stewart AK, Bergsagel PL, et al. Genomic Abnormalities Among African Individuals with Monoclonal Gammopathies Using Calculated Ancestry Blood. 132: 4458-4458. DOI: 10.1182/Blood-2018-99-117382 |
0.261 |
|
| 2014 |
Ertekin-Taner N, Wang C, Carrasquillo MM, Allen M, Younkin C, Serie D, Wang X, Pancratz VS, Nguyen T, Ma L, Malphrus K, Lincoln S, Petersen RC, Graff-Radford NR, Dickson DW, ... ... Asmann Y, et al. O3-04-01: NEXT-GENERATION RNA SEQUENCING IN ALZHEIMER'S DISEASE AND PROGRESSIVE SUPRANUCLEAR PALSY Alzheimer's & Dementia. 10: P214-P215. DOI: 10.1016/J.Jalz.2014.04.286 |
0.261 |
|
| 2020 |
Ogony JW, Radisky DC, Ruddy KJ, Goodison S, Wickland DP, Egan KM, Knutson KL, Asmann YW, Sherman ME. Immune Responses and Risk of Triple Negative Breast Cancer: Implications for Higher Rates among African American women. Cancer Prevention Research (Philadelphia, Pa.). PMID 32753376 DOI: 10.1158/1940-6207.Capr-19-0562 |
0.261 |
|
| 2019 |
Misund K, Keane N, Stein CK, Asmann YW, Day G, Welsh S, Van Wier SA, Riggs DL, Ahmann G, Chesi M, Viswanatha DS, Kumar SK, Dispenzieri A, Gonzalez-Calle V, Kyle RA, et al. MYC dysregulation in the progression of multiple myeloma. Leukemia. PMID 31439946 DOI: 10.1038/S41375-019-0543-4 |
0.26 |
|
| 2013 |
Kalari KR, Necela BM, Tang X, Thompson KJ, Lau M, Eckel-Passow JE, Kachergus JM, Anderson SK, Sun Z, Baheti S, Carr JM, Baker TR, Barman P, Radisky DC, Joseph RW, ... ... Asmann YW, et al. Representation of single nucleotide variant validation. Plos One. DOI: 10.1371/Journal.Pone.0079298.G008 |
0.26 |
|
| 2017 |
DeJesus-Hernandez M, Finch NA, Wang X, Gendron TF, Bieniek KF, Heckman MG, Vasilevich A, Murray ME, Rousseau L, Weesner R, Lucido A, Parsons M, Chew J, Josephs KA, Parisi JE, ... ... Asmann YW, et al. In-depth clinico-pathological examination of RNA foci in a large cohort of C9ORF72 expansion carriers. Acta Neuropathologica. PMID 28508101 DOI: 10.1007/S00401-017-1725-7 |
0.259 |
|
| 2018 |
Vasmatzis G, Wang X, Smadbeck JB, Murphy SJ, Geiersbach KB, Johnson SH, Gaitatzes AG, Asmann YW, Kosari F, Borad MJ, Serie DJ, McLaughlin SA, Kachergus JM, Necela BM, Aubrey Thompson E. Chromoanasynthesis is a common mechanism that leads to ERBB2 amplifications in a cohort of early stage HER2 breast cancer samples. Bmc Cancer. 18: 738. PMID 30005627 DOI: 10.1186/S12885-018-4594-0 |
0.258 |
|
| 2019 |
Wang Y, Habermann TM, Wang SS, Maurer MJ, Sarangi V, Link BK, Feldman AL, Inwards DJ, Witzig TE, Cozen W, Rothman N, Asmann Y, Slager SL, Cerhan JR. Host Genetic Variation in the TNF and NF-ĸB Pathways and Overall Survival in Mantle Cell Lymphoma: A Discovery and Replication Study. American Journal of Hematology. PMID 30815899 DOI: 10.1002/Ajh.25451 |
0.257 |
|
| 2013 |
Sun Z, Asmann YW, Nair A, Zhang Y, Wang L, Kalari KR, Bhagwate AV, Baker TR, Carr JM, Kocher JP, Perez EA, Thompson EA. Impact of library preparation on downstream analysis and interpretation of RNA-Seq data: comparison between Illumina PolyA and NuGEN Ovation protocol. Plos One. 8: e71745. PMID 23977132 DOI: 10.1371/Journal.Pone.0071745 |
0.257 |
|
| 2019 |
Hinerfeld D, Knutson K, Radisky D, Thompson EA, Asmann Y, McCoy K, Degnim A, Carter J, Winham S, Cote M, Laak Jvd, Sherman M. Abstract 651: Analysis of the immune microenvironment to advance breast cancer risk prediction and prevention Cancer Research. DOI: 10.1158/1538-7445.Sabcs18-651 |
0.256 |
|
| 2007 |
Karakelides H, Asmann Y, Bigelow M, Short KR, Dhatariya K, Nair KS. Skeletal muscle gene transcript changes in type 1 diabetic patients following insulin deprivation The Faseb Journal. 21. DOI: 10.1096/Fasebj.21.5.A343-D |
0.254 |
|
| 2016 |
Ghesquières H, Larrabee BR, Casasnovas O, Maurer MJ, McKay JD, Ansell SM, Montgomery D, Asmann YW, Farrell K, Verney A, Slager SL, Allmer C, Perrot A, Delarue R, Habermann TM, et al. A susceptibility locus for classical Hodgkin lymphoma at 8q24 near MYC/PVT1 predicts patient outcome in two independent cohorts. British Journal of Haematology. PMID 27716907 DOI: 10.1111/Bjh.14306 |
0.253 |
|
| 2017 |
Allen M, Wang X, Younkin CS, Serie D, Burgess JD, Nguyen T, Lincoln SJ, Malphrus KG, Carrasquillo MM, Kouri N, Murray ME, Schellenberg GD, Younkin SG, Crook JE, Asmann YW, et al. [P4-074]: INTEGRATIVE SYSTEMS BIOLOGY APPROACH TO IDENTIFY NOVEL RISK FACTORS FOR PSP Alzheimer's & Dementia. 13: P1286-P1286. DOI: 10.1016/J.Jalz.2017.06.1939 |
0.253 |
|
| 2009 |
Rajagopalan G, Tilahun AY, Asmann YW, David CS. Early gene expression changes induced by the bacterial superantigen staphylococcal enterotoxin B and its modulation by a proteasome inhibitor. Physiological Genomics. 37: 279-93. PMID 19336531 DOI: 10.1152/Physiolgenomics.90385.2008 |
0.253 |
|
| 2017 |
Allen M, Wang X, Burgess JD, Watzlawik J, Serie DJ, Younkin CS, Nguyen T, Malphrus KG, Lincoln S, Carrasquillo MM, Ho C, Chakrabarty P, Strickland S, Murray ME, Swarup V, ... ... Asmann YW, et al. Conserved brain myelination networks are altered in Alzheimer's and other neurodegenerative diseases. Alzheimer's & Dementia : the Journal of the Alzheimer's Association. PMID 29107053 DOI: 10.1016/J.Jalz.2017.09.012 |
0.251 |
|
| 2011 |
Hodge LS, Elsawa SF, Grote DM, Price-Troska TL, Asmann YW, Fonseca R, Gertz MA, Witzig TE, Novak AJ, Ansell SM. MicroRNA expression in tumor cells from Waldenstrom's macroglobulinemia reflects both their normal and malignant cell counterparts. Blood Cancer Journal. 1: e24. PMID 22829168 DOI: 10.1038/Bcj.2011.25 |
0.251 |
|
| 2004 |
Asmann YW, Dong M, Miller LJ. Functional characterization and purification of the secretin receptor expressed in baculovirus-infected insect cells. Regulatory Peptides. 123: 217-23. PMID 15518915 DOI: 10.1016/J.Regpep.2004.04.027 |
0.25 |
|
| 2017 |
Hu G, Dasari S, Asmann YW, Greipp PT, Knudson RA, Benson HK, Li Y, Eckloff BW, Jen J, Link BK, Jiang L, Sidhu JS, Wellik LE, Witzig TE, Bennani NN, et al. Targetable fusions of the FRK tyrosine kinase in ALK-negative anaplastic large cell lymphoma. Leukemia. PMID 29026208 DOI: 10.1038/Leu.2017.309 |
0.25 |
|
| 2013 |
Witzig TE, Wiseman GA, Maurer MJ, Habermann TM, Micallef IN, Nowakowski GS, Ansell SM, Colgan JP, Inwards DJ, Porrata LF, Link BK, Zent CS, Johnston PB, Shanafelt TD, Allmer C, ... Asmann YW, et al. A phase I trial of immunostimulatory CpG 7909 oligodeoxynucleotide and 90 yttrium ibritumomab tiuxetan radioimmunotherapy for relapsed B-cell non-Hodgkin lymphoma. American Journal of Hematology. 88: 589-93. PMID 23619698 DOI: 10.1002/Ajh.23460 |
0.249 |
|
| 2017 |
Boddicker RL, Hu G, Dasari S, Asmann YW, Greipp PT, Knudson RA, Eckloff BW, Jen J, Link BK, Bennani N, Cerhan JR, Feldman AL. Targetable Fusions Of The Frk Tyrosine Kinase In Alk‐Negative Anaplastic Large Cell Lymphoma Hematological Oncology. 35: 59-59. DOI: 10.1002/Hon.2437_45 |
0.248 |
|
| 2008 |
Haluska P, Carboni JM, Yu C, Ten Eyck C, Attar RM, Asmann YW, Sagar M, Wong TW, Gottardis MM, Erlichman CE. HER receptor signaling confers resistance to IGF-1R targeted therapy. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 26: 14510. PMID 27950779 DOI: 10.1200/Jco.2008.26.15_Suppl.14510 |
0.248 |
|
| 2017 |
Kourtidis A, Necela B, Lin WH, Lu R, Feathers RW, Asmann YW, Thompson EA, Anastasiadis PZ. Cadherin complexes recruit mRNAs and RISC to regulate epithelial cell signaling. The Journal of Cell Biology. PMID 28877994 DOI: 10.1083/Jcb.201612125 |
0.247 |
|
| 2017 |
Copland JA, Marlow LA, Bok I, Miller JL, Akiko M, Asmann YW, Sarangi V, Alberts SR, Mody K, Roberts LR, Truty MJ, Patel TC. Abstract 192: Targeting stearoyl CoA desaturase 1 (SCD1) in hepatobilliary carcinoma Cancer Research. 77: 192-192. DOI: 10.1158/1538-7445.Am2017-192 |
0.247 |
|
| 2020 |
Wang X, Allen M, Li S, Quicksall ZS, Patel TA, Carnwath TP, Reddy JS, Carrasquillo MM, Lincoln SJ, Nguyen TT, Malphrus KG, Dickson DW, Crook JE, Asmann YW, Ertekin-Taner N. Correction to: Deciphering cellular transcriptional alterations in Alzheimer's disease brains. Molecular Neurodegeneration. 15: 54. PMID 32928256 DOI: 10.1186/S13024-020-00403-6 |
0.246 |
|
| 2019 |
Baughn LB, Li Z, Pearce KE, Vachon CM, Polley M, Keats JJ, Elhaik E, Baird ML, Therneau T, Cerhan JR, Bergsagel PL, Dispenzieri A, Rajkumar SV, Asmann Y, Kumar SK. The CCND1 870G Risk Allele Is Enriched in African Individuals with Plasma Cell Dyscrasias Blood. 134: 4362-4362. DOI: 10.1182/Blood-2019-124979 |
0.246 |
|
| 2016 |
Allen M, Wang X, Younkin CS, Serie D, Sun Z, Burgess JD, Baheti S, Kouri N, Nguyen T, Lincoln S, Malphrus KG, Carrasquillo MM, Zou F, Chai H, Murray ME, ... ... Asmann YW, et al. P4-048: Convergent Analysis of Endophenotypes in Progressive Supranuclear Palsy Alzheimer's & Dementia. 12: P1032-P1033. DOI: 10.1016/J.Jalz.2016.06.2137 |
0.245 |
|
| 2020 |
Baughn LB, Li Z, Pearce K, Vachon CM, Polley MY, Keats J, Elhaik E, Baird M, Therneau T, Cerhan JR, Bergsagel PL, Dispenzieri A, Rajkumar SV, Asmann YW, Kumar S. The CCND1 c.870G risk allele is enriched in individuals of African ancestry with plasma cell dyscrasias. Blood Cancer Journal. 10: 39. PMID 32179748 DOI: 10.1038/S41408-020-0294-5 |
0.244 |
|
| 2011 |
Oberg AL, French AJ, Sarver AL, Subramanian S, Morlan BW, Riska SM, Borralho PM, Cunningham JM, Boardman LA, Wang L, Smyrk TC, Asmann Y, Steer CJ, Thibodeau SN. miRNA expression in colon polyps provides evidence for a multihit model of colon cancer. Plos One. 6: e20465. PMID 21694772 DOI: 10.1371/Journal.Pone.0020465 |
0.24 |
|
| 2006 |
Asmann YW, Stump CS, Short KR, Coenen-Schimke JM, Guo Z, Bigelow ML, Nair KS. Skeletal muscle mitochondrial functions, mitochondrial DNA copy numbers, and gene transcript profiles in type 2 diabetic and nondiabetic subjects at equal levels of low or high insulin and euglycemia. Diabetes. 55: 3309-19. PMID 17130474 DOI: 10.2337/Db05-1230 |
0.24 |
|
| 2016 |
Yan IK, Wang X, Asmann YW, Haga H, Patel T. Circulating Extracellular RNA Markers of Liver Regeneration. Plos One. 11: e0155888. PMID 27415797 DOI: 10.1371/Journal.Pone.0155888 |
0.24 |
|
| 2017 |
Kang SS, Ren Y, Liu CC, Kurti A, Baker KE, Bu G, Asmann Y, Fryer JD. Lipocalin-2 protects the brain during inflammatory conditions. Molecular Psychiatry. PMID 28070126 DOI: 10.1038/Mp.2016.243 |
0.239 |
|
| 2010 |
Dong J, Jiang G, Asmann YW, Tomaszek S, Jen J, Kislinger T, Wigle DA. MicroRNA networks in mouse lung organogenesis. Plos One. 5: e10854. PMID 20520778 DOI: 10.1371/Journal.Pone.0010854 |
0.237 |
|
| 2011 |
Necela BM, Carr JM, Asmann YW, Thompson EA. Differential expression of microRNAs in tumors from chronically inflamed or genetic (APC(Min/+)) models of colon cancer. Plos One. 6: e18501. PMID 21532750 DOI: 10.1371/Journal.Pone.0018501 |
0.236 |
|
| 2012 |
Dutta T, Chai HS, Ward LE, Ghosh A, Persson XM, Ford GC, Kudva YC, Sun Z, Asmann YW, Kocher JP, Nair KS. Concordance of changes in metabolic pathways based on plasma metabolomics and skeletal muscle transcriptomics in type 1 diabetes. Diabetes. 61: 1004-16. PMID 22415876 DOI: 10.2337/Db11-0874 |
0.233 |
|
| 2008 |
Nair KS, Bigelow ML, Asmann YW, Chow LS, Coenen-Schimke JM, Klaus KA, Guo ZK, Sreekumar R, Irving BA. Asian Indians have enhanced skeletal muscle mitochondrial capacity to produce ATP in association with severe insulin resistance. Diabetes. 57: 1166-75. PMID 18285554 DOI: 10.2337/Db07-1556 |
0.233 |
|
| 2010 |
Taylor JA, Cummins NW, Bren GD, Rizza SA, Kolbert CP, Behrens MD, Knutson KL, Kahl JC, Asmann YW, Badley AD. Casp8p41 expression in primary T cells induces a proinflammatory response. Aids (London, England). 24: 1251-8. PMID 20299954 DOI: 10.1097/Qad.0B013E3283389E90 |
0.231 |
|
| 2000 |
Asmann YW, Dong M, Ganguli S, Hadac EM, Miller LJ. Structural insights into the amino-terminus of the secretin receptor: I. Status of cysteine and cystine residues. Molecular Pharmacology. 58: 911-9. PMID 11040037 DOI: 10.1124/Mol.58.5.911 |
0.231 |
|
| 2017 |
Allen M, Wang X, Reddy JS, Carrasquillo MM, Younkin CS, Funk C, Burgess JD, Nguyen T, Lincoln SJ, Malphrus KG, Asmann YW, Younkin SG, Price ND, Golde TE, Dickson DW, et al. USING TISSUE-BASED TRANSCRIPTOMICS TO PROFILE CELL TYPE VARIABILITY IN THE BRAIN Alzheimer's & Dementia. 13: P588-P589. DOI: 10.1016/J.Jalz.2017.07.218 |
0.23 |
|
| 2000 |
Dong M, Asmann YW, Zang M, Pinon DI, Miller LJ. Identification of two pairs of spatially approximated residues within the carboxyl terminus of secretin and its receptor. The Journal of Biological Chemistry. 275: 26032-9. PMID 10859300 DOI: 10.1074/Jbc.M000612200 |
0.227 |
|
| 2007 |
Chow LS, Greenlund LJ, Asmann YW, Short KR, McCrady SK, Levine JA, Nair KS. Impact of endurance training on murine spontaneous activity, muscle mitochondrial DNA abundance, gene transcripts, and function. Journal of Applied Physiology (Bethesda, Md. : 1985). 102: 1078-89. PMID 17110513 DOI: 10.1152/Japplphysiol.00791.2006 |
0.226 |
|
| 2011 |
Rostambeigi N, Lanza IR, Dzeja PP, Deeds MC, Irving BA, Reddi HV, Madde P, Zhang S, Asmann YW, Anderson JM, Schimke JM, Nair KS, Eberhardt NL, Kudva YC. Unique cellular and mitochondrial defects mediate FK506-induced islet β-cell dysfunction. Transplantation. 91: 615-23. PMID 21200364 DOI: 10.1097/Tp.0B013E3182094A33 |
0.225 |
|
| 2006 |
Dong M, Pinon DI, Asmann YW, Miller LJ. Possible endogenous agonist mechanism for the activation of secretin family G protein-coupled receptors. Molecular Pharmacology. 70: 206-13. PMID 16531505 DOI: 10.1124/Mol.105.021840 |
0.225 |
|
| 2016 |
Holst F, Hoivik EA, Gibson WJ, Taylor-Weiner A, Schumacher SE, Asmann YW, Grossmann P, Trovik J, Necela BM, Thompson EA, Meyerson M, Beroukhim R, Salvesen HB, Cherniack AD. Corrigendum: Recurrent hormone-binding domain truncated ESR1 amplifications in primary endometrial cancers suggest their implication in hormone independent growth. Scientific Reports. 6: 27960. PMID 27338572 DOI: 10.1038/Srep27960 |
0.224 |
|
| 2016 |
Golde TE, Ertekin-Taner N, Chakrabarty P, Allen M, Carrasquillo MM, Dickson DW, Younkin SG, Levites Y, Price ND, Funk C, Heavner BD, Logsdon B, Mangravite LM, Li H, Burgess JD, ... ... Asmann YW, et al. F2-01-04: From Systems Level Transcriptomics to new Immune Targets for Alzheimer’s Disease Alzheimer's & Dementia. 12: P215-P216. DOI: 10.1016/J.Jalz.2016.06.383 |
0.224 |
|
| 2012 |
Lanza IR, Zabielski P, Klaus KA, Morse DM, Heppelmann CJ, Bergen HR, Dasari S, Walrand S, Short KR, Johnson ML, Robinson MM, Schimke JM, Jakaitis DR, Asmann YW, Sun Z, et al. Chronic caloric restriction preserves mitochondrial function in senescence without increasing mitochondrial biogenesis. Cell Metabolism. 16: 777-88. PMID 23217257 DOI: 10.1016/J.Cmet.2012.11.003 |
0.223 |
|
| 2009 |
Allemand MC, Irving BA, Asmann YW, Klaus KA, Tatpati L, Coddington CC, Nair KS. Effect of testosterone on insulin stimulated IRS1 Ser phosphorylation in primary rat myotubes--a potential model for PCOS-related insulin resistance. Plos One. 4: e4274. PMID 19169352 DOI: 10.1371/Journal.Pone.0004274 |
0.223 |
|
| 2016 |
Kennedy RB, Poland GA, Ovsyannikova IG, Oberg AL, Asmann YW, Grill DE, Vierkant RA, Jacobson RM. Impaired innate, humoral, and cellular immunity despite a take in smallpox vaccine recipients. Vaccine. PMID 27177944 DOI: 10.1016/J.Vaccine.2016.05.005 |
0.222 |
|
| 2008 |
Jaleel A, Short KR, Asmann YW, Klaus KA, Morse DM, Ford GC, Nair KS. In vivo measurement of synthesis rate of individual skeletal muscle mitochondrial proteins. American Journal of Physiology. Endocrinology and Metabolism. 295: E1255-68. PMID 18765679 DOI: 10.1152/Ajpendo.90586.2008 |
0.219 |
|
| 2010 |
Nandy D, Asmann YW, Mukhopadhyay D, Basu A. Role of AKT-glycogen synthase kinase axis in monocyte activation in human beings with and without type 2 diabetes. Journal of Cellular and Molecular Medicine. 14: 1396-407. PMID 19754670 DOI: 10.1111/J.1582-4934.2009.00900.X |
0.216 |
|
| 2012 |
Barazzoni R, Short KR, Asmann Y, Coenen-Schimke JM, Robinson MM, Nair KS. Insulin fails to enhance mTOR phosphorylation, mitochondrial protein synthesis, and ATP production in human skeletal muscle without amino acid replacement American Journal of Physiology - Endocrinology and Metabolism. 303: E1117-E1125. PMID 22967500 DOI: 10.1152/Ajpendo.00067.2012 |
0.214 |
|
| 2020 |
Chesi M, Stein CK, Garbitt VM, Sharik ME, Asmann YW, Bergsagel M, Riggs DL, Welsh SJ, Meermeier EW, Kumar SK, Braggio E, Bergsagel PL. Monosomic loss of MIR15A/MIR16-1 is a driver of multiple myeloma proliferation and disease progression. Blood Cancer Discovery. 1: 68-81. PMID 32954360 DOI: 10.1158/0008-5472.bcd-19-0068 |
0.208 |
|
| 2005 |
Allemand MC, Asmann Y, Klaus K, Nair KS. An In Vitro Model for PCOS Related Insulin Resistance: The Effects of Testosterone on Phosphorylation of Intracellular Insulin Signaling Proteins in Rat Skeletal Muscle Primary Culture Fertility and Sterility. 84. DOI: 10.1016/J.Fertnstert.2005.07.072 |
0.208 |
|
| 2021 |
Wickland DP, Ren Y, Sinnwell JP, Reddy JS, Pottier C, Sarangi V, Carrasquillo MM, Ross OA, Younkin SG, Ertekin-Taner N, Rademakers R, Hudson ME, Mainzer LS, Biernacka JM, Asmann YW. Impact of variant-level batch effects on identification of genetic risk factors in large sequencing studies. Plos One. 16: e0249305. PMID 33861770 DOI: 10.1371/journal.pone.0249305 |
0.208 |
|
| 2023 |
Ren Y, Wang X, Zhang S, Hu H, Quicksall Z, Lee S, Morganti JM, Johnson LA, Asmann YW, Zhao N. Deconvolution reveals cell-type-specific transcriptomic changes in the aging mouse brain. Scientific Reports. 13: 16855. PMID 37803069 DOI: 10.1038/s41598-023-44183-7 |
0.207 |
|
| 2021 |
Crist AM, Hinkle KM, Wang X, Moloney CM, Matchett BJ, Labuzan SA, Frankenhauser I, Azu NO, Liesinger AM, Lesser ER, Serie DJ, Quicksall ZS, Patel TA, Carnwath TP, DeTure M, ... ... Asmann YW, et al. Transcriptomic analysis to identify genes associated with selective hippocampal vulnerability in Alzheimer's disease. Nature Communications. 12: 2311. PMID 33875655 DOI: 10.1038/s41467-021-22399-3 |
0.205 |
|
| 2013 |
Kalari KR, Necela BM, Tang X, Thompson KJ, Lau M, Eckel-Passow JE, Kachergus JM, Anderson SK, Sun Z, Baheti S, Carr JM, Baker TR, Barman P, Radisky DC, Joseph RW, ... ... Asmann YW, et al. Methods workflow for HER2 transcriptomic network. Plos One. DOI: 10.1371/Journal.Pone.0079298.G001 |
0.2 |
|
| 2021 |
Wang X, Allen M, İş Ö, Reddy JS, Tutor-New FQ, Castanedes Casey M, Carrasquillo MM, Oatman SR, Min Y, Asmann YW, Funk C, Nguyen T, Ho CC, Malphrus KG, Seyfried NT, et al. Alzheimer's disease and progressive supranuclear palsy share similar transcriptomic changes in distinct brain regions. The Journal of Clinical Investigation. PMID 34813500 DOI: 10.1172/JCI149904 |
0.196 |
|
| 2021 |
Carrano A, Zarco N, Phillipps J, Lara-Velazquez M, Suarez-Meade P, Norton ES, Chaichana KL, Quiñones-Hinojosa A, Asmann YW, Guerrero-Cázares H. Human Cerebrospinal Fluid Modulates Pathways Promoting Glioblastoma Malignancy. Frontiers in Oncology. 11: 624145. PMID 33747938 DOI: 10.3389/fonc.2021.624145 |
0.196 |
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| 2021 |
Pottier C, Mateiu L, Baker MC, DeJesus-Hernandez M, Teixeira Vicente C, Finch NA, Tian S, van Blitterswijk M, Murray ME, Ren Y, Petrucelli L, Oskarsson B, Biernacka JM, Graff-Radford NR, Boeve BF, ... ... Asmann YW, et al. Shared brain transcriptomic signature in TDP-43 type A FTLD patients with or without GRN mutations. Brain : a Journal of Neurology. PMID 34918030 DOI: 10.1093/brain/awab437 |
0.193 |
|
| 2014 |
Cerhan JR, Berndt SI, Vijai J, Ghesquières H, McKay J, Wang SS, Wang Z, Yeager M, Conde L, de Bakker PI, Nieters A, Cox D, Burdett L, Monnereau A, Flowers CR, ... ... Asmann YW, et al. Genome-wide association study identifies multiple susceptibility loci for diffuse large B cell lymphoma. Nature Genetics. 46: 1233-8. PMID 25261932 DOI: 10.1038/Ng.3105 |
0.192 |
|
| 2013 |
Kalari KR, Necela BM, Tang X, Thompson KJ, Lau M, Eckel-Passow JE, Kachergus JM, Anderson SK, Sun Z, Baheti S, Carr JM, Baker TR, Barman P, Radisky DC, Joseph RW, ... ... Asmann YW, et al. The eSNV-Detect workflow. Plos One. DOI: 10.1371/Journal.Pone.0079298.G002 |
0.187 |
|
| 2013 |
Kalari KR, Necela BM, Tang X, Thompson KJ, Lau M, Eckel-Passow JE, Kachergus JM, Anderson SK, Sun Z, Baheti S, Carr JM, Baker TR, Barman P, Radisky DC, Joseph RW, ... ... Asmann YW, et al. Schematic of analytical approach. Plos One. DOI: 10.1371/Journal.Pone.0079298.G003 |
0.187 |
|
| 2021 |
Sharma N, Smadbeck JB, Abdallah N, Zepeda-Mendoza C, Binder M, Pearce KE, Asmann YW, Peterson JF, Ketterling RP, Greipp PT, Bergsagel PL, Rajkumar SV, Kumar SK, Baughn LB. The prognostic role of structural variants identified by NGS and FISH in multiple myeloma. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 34233962 DOI: 10.1158/1078-0432.CCR-21-0005 |
0.186 |
|
| 2020 |
Lara-Velazquez M, Zarco N, Carrano A, Phillipps J, Norton ES, Schiapparelli P, Alkharboosh R, Rincon-Torroella J, Jeanneret S, Corona T, Segovia J, Jentoft ME, Chaichana KL, Asmann YW, Quinones-Hinojosa A, et al. Alpha 1-antichymotrypsin contributes to stem cell characteristics and enhances tumorigenicity of Glioblastoma. Neuro-Oncology. PMID 33249487 DOI: 10.1093/neuonc/noaa264 |
0.179 |
|
| 2012 |
Cerhan JR, Natkunam Y, Morton LM, Maurer MJ, Asmann Y, Habermann TM, Vasef MA, Cozen W, Lynch CF, Allmer C, Slager SL, Lossos IS, Chanock SJ, Rothman N, Hartge P, et al. LIM domain only 2 protein expression, LMO2 germline genetic variation, and overall survival in diffuse large B-cell lymphoma in the pre-rituximab era. Leukemia & Lymphoma. 53: 1105-12. PMID 22066713 DOI: 10.3109/10428194.2011.638717 |
0.174 |
|
| 2023 |
Norton ES, Whaley LA, Jones VK, Brooks MM, Russo MN, Morderer D, Jessen E, Schiapparelli P, Ramos-Fresnedo A, Zarco N, Carrano A, Rossoll W, Asmann YW, Lam TT, Chaichana KL, et al. Cell-specific crosstalk proteomics reveals cathepsin B signaling as a driver of glioblastoma malignancy near the subventricular zone. Biorxiv : the Preprint Server For Biology. PMID 37662251 DOI: 10.1101/2023.08.19.553966 |
0.172 |
|
| 2021 |
Vivekanandhan S, Madamsetty VS, Angom RS, Dutta SK, Wang E, Caulfield T, Pletnev AA, Upstill-Goddard R, Asmann YW, Chang D, Spaller MR, Mukhopadhyay D. Role of PLEXIND1/TGFβ Signaling Axis in Pancreatic Ductal Adenocarcinoma Progression Correlates with the Mutational Status of . Cancers. 13. PMID 34439202 DOI: 10.3390/cancers13164048 |
0.165 |
|
| 2021 |
Asmann YW, Parikh K, Bergsagel PL, Dong H, Adjei AA, Borad MJ, Mansfield AS. Inflation of tumor mutation burden by tumor-only sequencing in under-represented groups. Npj Precision Oncology. 5: 22. PMID 33742076 DOI: 10.1038/s41698-021-00164-5 |
0.163 |
|
| 2023 |
Wenzl K, Stokes M, Novak JP, Bock AM, Khan S, Hopper MA, Krull JE, Dropik AR, Walker JS, Sarangi V, Mwangi R, Ortiz M, Stong N, Huang CC, Maurer MJ, ... ... Asmann Y, et al. Multiomic Analysis Identifies a High-Risk Metabolic and TME Depleted Signature that Predicts Early Clinical Failure in DLBCL. Medrxiv : the Preprint Server For Health Sciences. PMID 37333387 DOI: 10.1101/2023.06.07.23290748 |
0.16 |
|
| 2002 |
Asmann YW, Kosari F, Wang K, Cheville JC, Vasmatzis G. Identification of differentially expressed genes in normal and malignant prostate by electronic profiling of expressed sequence tags. Cancer Research. 62: 3308-14. PMID 12036949 |
0.159 |
|
| 2023 |
Ailawadhi S, Parrondo RD, Dutta N, Han B, Ciccio G, Cherukuri Y, Alegria VR, LaPlant BR, Roy V, Sher T, Edwards B, Lanier S, Manna A, Heslop K, Caulfield T, ... ... Asmann Y, et al. AT-101 Enhances the Antitumor Activity of Lenalidomide in Patients with Multiple Myeloma. Cancers. 15. PMID 36672426 DOI: 10.3390/cancers15020477 |
0.158 |
|
| 2020 |
Yamazaki Y, Liu CC, Yamazaki A, Shue F, Martens YA, Chen Y, Qiao W, Kurti A, Oue H, Ren Y, Li Y, Aikawa T, Cherukuri Y, Fryer JD, Asmann YW, et al. Vascular ApoE4 Impairs Behavior by Modulating Gliovascular Function. Neuron. PMID 33321072 DOI: 10.1016/j.neuron.2020.11.019 |
0.153 |
|
| 2022 |
Zhao N, Qiao W, Li F, Ren Y, Zheng J, Martens YA, Wang X, Li L, Liu CC, Chen K, Zhu Y, Ikezu TC, Li Z, Meneses AD, Jin Y, ... ... Asmann YW, et al. Elevating microglia TREM2 reduces amyloid seeding and suppresses disease-associated microglia. The Journal of Experimental Medicine. 219. PMID 36107206 DOI: 10.1084/jem.20212479 |
0.152 |
|
| 2013 |
Jouni H, Shameer K, Asmann YW, Hazin R, de Andrade M, Kullo IJ. Clinical Correlates of Autosomal Chromosomal Abnormalities in an Electronic Medical Record-Linked Genome-Wide Association Study: A Case Series. Journal of Investigative Medicine High Impact Case Reports. 1: 2324709613508932. PMID 26425586 DOI: 10.1177/2324709613508932 |
0.152 |
|
| 2013 |
Jouni H, Shameer K, Asmann YW, Hazin R, de Andrade M, Kullo IJ. Clinical Correlates of Autosomal Chromosomal Abnormalities in an Electronic Medical Record-Linked Genome-Wide Association Study: A Case Series. Journal of Investigative Medicine High Impact Case Reports. 1: 2324709613508932. PMID 26425586 DOI: 10.1177/2324709613508932 |
0.152 |
|
| 2021 |
Jouni H, Shameer K, Asmann YW, Hazin R, de Andrade M, Kullo IJ. Clinical Correlates of Autosomal Chromosomal Abnormalities in an Electronic Medical Record-Linked Genome-Wide Association Study: A Case Series. Journal of Investigative Medicine : the Official Publication of the American Federation For Clinical Research. 1. PMID 25125939 |
0.148 |
|
| 2022 |
Wickland DP, Sherman ME, Radisky DC, Mansfield AS, Asmann YW. Lower Exome Sequencing Coverage of Ancestrally African Patients in the Cancer Genome Atlas. Journal of the National Cancer Institute. PMID 35299252 DOI: 10.1093/jnci/djac054 |
0.145 |
|
| 2022 |
Liu CC, Zhao J, Fu Y, Inoue Y, Ren Y, Chen Y, Doss SV, Shue F, Jeevaratnam S, Bastea L, Wang N, Martens YA, Qiao W, Wang M, Zhao N, ... ... Asmann YW, et al. Peripheral apoE4 enhances Alzheimer's pathology and impairs cognition by compromising cerebrovascular function. Nature Neuroscience. 25: 1020-1033. PMID 35915180 DOI: 10.1038/s41593-022-01127-0 |
0.139 |
|
| 2021 |
Aikawa T, Ren Y, Holm ML, Asmann YW, Alam A, Fitzgerald ML, Bu G, Kanekiyo T. ABCA7 Regulates Brain Fatty Acid Metabolism During LPS-Induced Acute Inflammation. Frontiers in Neuroscience. 15: 647974. PMID 33897360 DOI: 10.3389/fnins.2021.647974 |
0.13 |
|
| 2021 |
Zhao J, Lu W, Ren Y, Fu Y, Martens YA, Shue F, Davis MD, Wang X, Chen K, Li F, Liu CC, Graff-Radford NR, Wszolek ZK, Younkin SG, Brafman DA, ... ... Asmann YW, et al. Apolipoprotein E regulates lipid metabolism and α-synuclein pathology in human iPSC-derived cerebral organoids. Acta Neuropathologica. PMID 34453582 DOI: 10.1007/s00401-021-02361-9 |
0.121 |
|
| 2022 |
Zhao N, Quicksall Z, Asmann YW, Ren Y. Network approaches for omics studies of neurodegenerative diseases. Frontiers in Genetics. 13: 984338. PMID 36186441 DOI: 10.3389/fgene.2022.984338 |
0.121 |
|
| 2020 |
Zhao J, Fu Y, Yamazaki Y, Ren Y, Davis MD, Liu CC, Lu W, Wang X, Chen K, Cherukuri Y, Jia L, Martens YA, Job L, Shue F, Nguyen TT, ... ... Asmann YW, et al. APOE4 exacerbates synapse loss and neurodegeneration in Alzheimer's disease patient iPSC-derived cerebral organoids. Nature Communications. 11: 5540. PMID 33139712 DOI: 10.1038/s41467-020-19264-0 |
0.119 |
|
| 2021 |
Rademakers R, Nicholson AM, Ren Y, Koga S, Nguyen HP, Brooks M, Qiao W, Quicksall ZS, Matchett B, Perkerson RB, Kurti A, Castanedes-Casey M, Phillips V, Librero AL, Fernandez De Castro CH, ... ... Asmann Y, et al. Loss of Tmem106b leads to cerebellum Purkinje cell death and motor deficits. Brain Pathology (Zurich, Switzerland). e12945. PMID 33709463 DOI: 10.1111/bpa.12945 |
0.117 |
|
| 2023 |
Zhao J, Ikezu TC, Lu W, Macyczko JR, Li Y, Lewis-Tuffin LJ, Martens YA, Ren Y, Zhu Y, Asmann YW, Ertekin-Taner N, Kanekiyo T, Bu G. APOE deficiency impacts neural differentiation and cholesterol biosynthesis in human iPSC-derived cerebral organoids. Stem Cell Research & Therapy. 14: 214. PMID 37605285 DOI: 10.1186/s13287-023-03444-y |
0.111 |
|
| 2023 |
Oue H, Yamazaki Y, Qiao W, Yuanxin C, Ren Y, Kurti A, Shue F, Parsons TM, Perkerson RB, Kawatani K, Wang N, Starling SC, Roy B, Mosneag IE, Aikawa T, ... ... Asmann YW, et al. LRP1 in vascular mural cells modulates cerebrovascular integrity and function in the presence of APOE4. Jci Insight. 8. PMID 37036005 DOI: 10.1172/jci.insight.163822 |
0.108 |
|
| 2022 |
Zhao Y, Shao J, Asmann YW. Assessment and optimization of explainable machine learning models applied to transcriptomic data. Genomics, Proteomics & Bioinformatics. PMID 35931322 DOI: 10.1016/j.gpb.2022.07.003 |
0.094 |
|
| 2024 |
Shue F, White LJ, Hendrix R, Ulrich J, Henson RL, Knight W, Martens YA, Wang N, Roy B, Starling SC, Ren Y, Xiong C, Asmann YW, Syrjanen JA, Vassilaki M, et al. CSF biomarkers of immune activation and Alzheimer's disease for predicting cognitive impairment risk in the elderly. Science Advances. 10: eadk3674. PMID 38569027 DOI: 10.1126/sciadv.adk3674 |
0.093 |
|
| 2021 |
Zhao J, Fu Y, Yamazaki Y, Ren Y, Davis MD, Liu CC, Lu W, Wang X, Chen K, Cherukuri Y, Jia L, Martens YA, Job L, Shue F, Nguyen TT, ... ... Asmann YW, et al. Author Correction: APOE4 exacerbates synapse loss and neurodegeneration in Alzheimer's disease patient iPSC-derived cerebral organoids. Nature Communications. 12: 2707. PMID 33953196 DOI: 10.1038/s41467-021-23081-4 |
0.082 |
|
| 2021 |
Liu CC, Murray ME, Li X, Zhao N, Wang N, Heckman MG, Shue F, Martens Y, Li Y, Raulin AC, Rosenberg CL, Doss SV, Zhao J, Wren MC, Jia L, ... ... Asmann YW, et al. -Jacksonville (V236E) variant reduces self-aggregation and risk of dementia. Science Translational Medicine. 13: eabc9375. PMID 34586832 DOI: 10.1126/scitranslmed.abc9375 |
0.076 |
|
| 2017 |
Holst F, Hoivik EA, Gibson WJ, Taylor-Weiner A, Schumacher SE, Asmann YW, Grossmann P, Trovik J, Necela BM, Thompson EA, Meyerson M, Beroukhim R, Salvesen HB, Cherniack AD. Corrigendum: Recurrent hormone-binding domain truncated ESR1 amplifications in primary endometrial cancers suggest their implication in hormone independent growth. Scientific Reports. 7: 46873. PMID 28664899 DOI: 10.1038/srep46873 |
0.074 |
|
| 2022 |
Wang N, Wang M, Jeevaratnam S, Rosenberg C, Ikezu TC, Shue F, Doss SV, Alnobani A, Martens YA, Wren M, Asmann YW, Zhang B, Bu G, Liu CC. Opposing effects of apoE2 and apoE4 on microglial activation and lipid metabolism in response to demyelination. Molecular Neurodegeneration. 17: 75. PMID 36419137 DOI: 10.1186/s13024-022-00577-1 |
0.069 |
|
| 2002 |
Kosari F, Asmann YW, Cheville JC, Vasmatzis G. Cysteine-rich secretory protein-3: a potential biomarker for prostate cancer. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. 11: 1419-26. PMID 12433721 |
0.059 |
|
| 2021 |
Zhao J, Lu W, Ren Y, Fu Y, Martens YA, Shue F, Davis MD, Wang X, Chen K, Li F, Liu CC, Graff-Radford NR, Wszolek ZK, Younkin SG, Brafman DA, ... ... Asmann YW, et al. Correction to: Apolipoprotein E regulates lipid metabolism and α‑synuclein pathology in human iPSC‑derived cerebral organoids. Acta Neuropathologica. PMID 34724591 DOI: 10.1007/s00401-021-02380-6 |
0.041 |
|
| 2022 |
Wickland DP, Sherman ME, Radisky DC, Mansfield AS, Asmann YW. Response to Mitr and Pollack. Journal of the National Cancer Institute. PMID 35801929 DOI: 10.1093/jnci/djac133 |
0.02 |
|
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