| Year |
Citation |
Score |
| 2022 |
Strzepek RF, Nunn BL, Bach LT, Berges JA, Young EB, Boyd PW. The ongoing need for rates: can physiology and omics come together to co-design the measurements needed to understand complex ocean biogeochemistry? Journal of Plankton Research. 44: 485-495. PMID 35898813 DOI: 10.1093/plankt/fbac026 |
0.765 |
|
| 2022 |
Young EB, Reed L, Berges JA. Growth parameters and responses of green algae across a gradient of phototrophic, mixotrophic and heterotrophic conditions. Peerj. 10: e13776. PMID 35891646 DOI: 10.7717/peerj.13776 |
0.682 |
|
| 2021 |
Berges JA, Driskill AM, Guinn EJ, Pokrzywinski K, Quinlan J, von Korff B, Young EB. Role of nearshore benthic algae in the Lake Michigan silica cycle. Plos One. 16: e0256838. PMID 34437648 DOI: 10.1371/journal.pone.0256838 |
0.659 |
|
| 2020 |
Minina EA, Staal J, Alvarez VE, Berges JA, Berman-Frank I, Beyaert R, Bidle KD, Bornancin F, Casanova M, Cazzulo JJ, Choi CJ, Coll NS, Dixit VM, Dolinar M, Fasel N, et al. Classification and Nomenclature of Metacaspases and Paracaspases: No More Confusion with Caspases. Molecular Cell. 77: 927-929. PMID 32142688 DOI: 10.1016/J.Molcel.2019.12.020 |
0.633 |
|
| 2020 |
Berges JA, Gronquist DJ, Engevold PG, Thorngate‐Rein N, Sandgren CD, Bowen KL, Currie WJS. Immunochemical methods for identification of prey in freshwater zooplankton Limnology and Oceanography: Methods. 18: 221-234. DOI: 10.1002/Lom3.10366 |
0.721 |
|
| 2019 |
Kozik C, Young EB, Sandgren CD, Berges JA. Cell death in individual freshwater phytoplankton species: relationships with population dynamics and environmental factors European Journal of Phycology. 54: 369-379. DOI: 10.1080/09670262.2018.1563216 |
0.685 |
|
| 2017 |
Luo S, Berges JA, He Z, Young EB. Algal-microbial community collaboration for energy recovery and nutrient remediation from wastewater in integrated photobioelectrochemical systems Algal Research. 24: 527-539. DOI: 10.1016/J.Algal.2016.10.006 |
0.677 |
|
| 2017 |
Hanson AM, Berges JA, Young EB. Virus morphological diversity and relationship to bacteria and chlorophyll across a freshwater trophic gradient in the Lake Michigan watershed Hydrobiologia. 794: 93-108. DOI: 10.1007/S10750-016-3084-0 |
0.761 |
|
| 2016 |
Simmons LJ, Sandgren CD, Berges JA. Problems and pitfalls in using HPLC pigment analysis to distinguish Lake Michigan phytoplankton taxa Journal of Great Lakes Research. 42: 397-404. DOI: 10.1016/J.Jglr.2015.12.006 |
0.772 |
|
| 2015 |
Engevold PM, Young EB, Sandgren CD, Berges JA. Pressure from top and bottom: Lower food web responses to changes in nutrient cycling and invasive species in western Lake Michigan Journal of Great Lakes Research. 41: 86-94. DOI: 10.1016/J.Jglr.2015.04.015 |
0.715 |
|
| 2014 |
Jiang Y, Yin K, Berges JA, Harrison PJ. Effects of silicate resupply to silicate-deprived Thalassiosira weissflogii (Bacillariophyceae) in stationary or senescent phase: short-term patterns of growth and cell death. Journal of Phycology. 50: 602-6. PMID 26988331 DOI: 10.1111/Jpy.12176 |
0.429 |
|
| 2014 |
Ribalet F, Bastianini M, Vidoudez C, Acri F, Berges J, Ianora A, Miralto A, Pohnert G, Romano G, Wichard T, Casotti R. Phytoplankton cell lysis associated with polyunsaturated aldehyde release in the Northern Adriatic Sea. Plos One. 9: e85947. PMID 24497933 DOI: 10.1371/Journal.Pone.0085947 |
0.356 |
|
| 2014 |
Schaefer WF, Schmitz MH, Blazer VS, Ehlinger TJ, Berges JA. Localization and seasonal variation of blue pigment (sandercyanin) in walleye (Sanders vitreus) Canadian Journal of Fisheries and Aquatic Sciences. 72: 281-289. DOI: 10.1139/Cjfas-2014-0139 |
0.336 |
|
| 2014 |
Jiang Y, Yin K, Berges JA, Harrison PJ. Effects of silicate resupply to silicate-deprived thalassiosira weissflogii (bacillariophyta) in stationary or senescent phase: Short-term patterns of growth and cell death Journal of Phycology. DOI: 10.1111/jpy.12176 |
0.331 |
|
| 2014 |
Berges JA, Jiang Y, Sterner RW, Bullerjahn GS, Ivanikova NA, McKay RML. Identification of factors constraining nitrate assimilation in Lake Superior, Laurentian Great Lakes Hydrobiologia. 731: 81-94. DOI: 10.1007/S10750-013-1637-Z |
0.373 |
|
| 2013 |
Fredrick ND, Berges JA, Twining BS, Nuñez-Milland D, Hellweger FL. Use of agent-based modeling to explore the mechanisms of intracellular phosphorus heterogeneity in cultured phytoplankton. Applied and Environmental Microbiology. 79: 4359-68. PMID 23666327 DOI: 10.1128/Aem.00487-13 |
0.324 |
|
| 2013 |
Gronquist D, Berges JA. Effects of aquarium-related stressors on the zebrafish: a comparison of behavioral, physiological, and biochemical indicators. Journal of Aquatic Animal Health. 25: 53-65. PMID 23339327 DOI: 10.1080/08997659.2012.747450 |
0.733 |
|
| 2013 |
Béchette A, Stojsavljevic T, Tessmer M, Berges JA, Pinter GA, Young EB. Mathematical modeling of bacteria-virus interactions in Lake Michigan incorporating phosphorus content Journal of Great Lakes Research. 39: 646-654. DOI: 10.1016/J.Jglr.2013.09.003 |
0.687 |
|
| 2012 |
Xiao L, Young EB, Berges JA, He Z. Integrated photo-bioelectrochemical system for contaminants removal and bioenergy production. Environmental Science & Technology. 46: 11459-66. PMID 22998430 DOI: 10.1021/Es303144N |
0.677 |
|
| 2012 |
Choi CJ, Berges JA, Young EB. Rapid effects of diverse toxic water pollutants on chlorophyll a fluorescence: variable responses among freshwater microalgae. Water Research. 46: 2615-26. PMID 22406285 DOI: 10.1016/J.Watres.2012.02.027 |
0.758 |
|
| 2012 |
Franklin DJ, Airs RL, Fernandes M, Bell TG, Bongaerts RJ, Berges JA, Malin G. Identification of senescence and death in Emiliania huxleyi and Thalassiosira pseudonana: Cell staining, chlorophyll alterations, and dimethylsulfoniopropionate (DMSP) metabolism Limnology and Oceanography. 57: 305-317. DOI: 10.4319/Lo.2012.57.1.0305 |
0.632 |
|
| 2009 |
Segovia M, Berges JA. INHIBITION OF CASPASE-LIKE ACTIVITIES PREVENTS THE APPEARANCE OF REACTIVE OXYGEN SPECIES AND DARK-INDUCED APOPTOSIS IN THE UNICELLULAR CHLOROPHYTE DUNALIELLA TERTIOLECTA(1). Journal of Phycology. 45: 1116-26. PMID 27032357 DOI: 10.1111/J.1529-8817.2009.00733.X |
0.704 |
|
| 2009 |
Young EB, Berges JA, Dring MJ. Physiological responses of intertidal marine brown algae to nitrogen deprivation and resupply of nitrate and ammonium. Physiologia Plantarum. 135: 400-11. PMID 19220777 DOI: 10.1111/J.1399-3054.2008.01199.X |
0.679 |
|
| 2009 |
Franklin DJ, Choi CJ, Hughes C, Malin G, Berges JA. Effect of dead phytoplankton cells on the apparent efficiency of photosystem II Marine Ecology Progress Series. 382: 35-40. DOI: 10.3354/Meps07967 |
0.756 |
|
| 2008 |
Bowler C, Allen AE, Badger JH, Grimwood J, Jabbari K, Kuo A, Maheswari U, Martens C, Maumus F, Otillar RP, Rayko E, Salamov A, Vandepoele K, Beszteri B, Gruber A, ... ... Berges JA, et al. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Nature. 456: 239-44. PMID 18923393 DOI: 10.1038/Nature07410 |
0.656 |
|
| 2007 |
Ribalet F, Berges JA, Ianora A, Casotti R. Growth inhibition of cultured marine phytoplankton by toxic algal-derived polyunsaturated aldehydes. Aquatic Toxicology (Amsterdam, Netherlands). 85: 219-27. PMID 17942163 DOI: 10.1016/J.Aquatox.2007.09.006 |
0.355 |
|
| 2007 |
Young EB, Dring MJ, Savidge G, Birkett DA, Berges JA. Seasonal variations in nitrate reductase activity and internal N pools in intertidal brown algae are correlated with ambient nitrate concentrations. Plant, Cell & Environment. 30: 764-74. PMID 17470152 DOI: 10.1111/J.1365-3040.2007.01666.X |
0.695 |
|
| 2007 |
Young EB, Dring MJ, Berges JA. Distinct patterns of nitrate reductase activity in brown algae: Light and ammonium sensitivity in Laminaria digitata is absent in Fucus species Journal of Phycology. 43: 1200-1208. DOI: 10.1111/J.1529-8817.2007.00403.X |
0.683 |
|
| 2007 |
Montsant A, Allen AE, Coesel S, Martino AD, Falciatore A, Mangogna M, Siaut M, Heijde M, Jabbari K, Maheswari U, Rayko E, Vardi A, Apt KE, Berges JA, Chiovitti A, et al. Identification and comparative genomic analysis of signaling and regulatory components in the diatom Thalassiosira pseudonana Journal of Phycology. 43: 585-604. DOI: 10.1111/J.1529-8817.2007.00342.X |
0.323 |
|
| 2006 |
Kirkpatrick AJ, Gerhardt A, Dick JT, Laming P, Berges JA. Suitability of Crangonyx pseudogracilis (Crustacea: Amphipoda) as an early warning indicator in the multispecies freshwater biomonitor. Environmental Science and Pollution Research International. 13: 242-50. PMID 16910122 |
0.582 |
|
| 2006 |
Kirkpatrick AJ, Gerhardt A, Dick JT, McKenna M, Berges JA. Use of the multispecies freshwater biomonitor to assess behavioral changes of Corophium volutator (Pallas, 1766) (Crustacea, Amphipoda) in response to toxicant exposure in sediment. Ecotoxicology and Environmental Safety. 64: 298-303. PMID 16129488 DOI: 10.1016/J.Ecoenv.2005.07.003 |
0.617 |
|
| 2006 |
Franklin DJ, Brussaard CPD, Berges JA. What is the role and nature of programmed cell death in phytoplankton ecology? European Journal of Phycology. 41: 1-14. DOI: 10.1080/09670260500505433 |
0.629 |
|
| 2005 |
Young E, Lavery P, van Elven B, Dring M, Berges J. Nitrate reductase activity in macroalgae and its vertical distribution in macroalgal epiphytes of seagrasses Marine Ecology Progress Series. 288: 103-114. DOI: 10.3354/Meps288103 |
0.701 |
|
| 2005 |
Segovia M, Berges JA. Effect of inhibitors of protein synthesis and DNA replication on the induction of proteolytic activities, caspase-like activities and cell death in the unicellular chlorophyteDunaliella tertiolecta European Journal of Phycology. 40: 21-30. DOI: 10.1080/09670260400019774 |
0.702 |
|
| 2004 |
Franklin DJ, Berges JA. Mortality in cultures of the dinoflagellate Amphidinium carterae during culture senescence and darkness. Proceedings. Biological Sciences / the Royal Society. 271: 2099-107. PMID 15475328 DOI: 10.1098/Rspb.2004.2810 |
0.621 |
|
| 2004 |
Montagnes DJ, Berges JA. Determining parameters of the numerical response. Microbial Ecology. 48: 139-44. PMID 15164242 DOI: 10.1007/S00248-003-9000-Y |
0.313 |
|
| 2004 |
Franklin D, Hoegh-Guldberg O, Jones R, Berges J. Cell death and degeneration in the symbiotic dinoflagellates of the coral Stylophora pistillata during bleaching Marine Ecology Progress Series. 272: 117-130. DOI: 10.3354/Meps272117 |
0.639 |
|
| 2004 |
Berges JA, Gibson CE, Stewart BM. Physiological responses of phytoplankton communities in the Irish Sea to simulated upwelling Hydrobiologia. 517: 121-132. DOI: 10.1023/B:Hydr.0000027338.38899.D2 |
0.377 |
|
| 2004 |
Wilson S, Blake C, Berges JA, Maggs CA. Environmental tolerances of free-living coralline algae (maerl): implications for European marine conservation Biological Conservation. 120: 279-289. DOI: 10.1016/J.Biocon.2004.03.001 |
0.348 |
|
| 2003 |
Segovia M, Haramaty L, Berges JA, Falkowski PG. Cell death in the unicellular chlorophyte Dunaliella tertiolecta. A hypothesis on the evolution of apoptosis in higher plants and metazoans. Plant Physiology. 132: 99-105. PMID 12746516 DOI: 10.1104/Pp.102.017129 |
0.742 |
|
| 2003 |
Pérez-Lloréns JL, Benítez E, Vergara JJ, Berges JA. Characterization of proteolytic enzyme activities in macroalgae European Journal of Phycology. 38: 55-64. DOI: 10.1080/0967026031000096254 |
0.369 |
|
| 2002 |
Berges JA, Varela DE, Harrison PJ. Effects of temperature on growth rate, cell composition and nitrogen metabolism in the marine diatom Thalassiosira pseudonana (Bacillariophyceae) Marine Ecology Progress Series. 225: 139-146. DOI: 10.3354/Meps225139 |
0.711 |
|
| 2002 |
Lourenco SO, Berges JA. Physiological and Biochemical Responses of Two Seaweeds to Nutrient or Light Deprivation Journal of Phycology. 38: 25-26. DOI: 10.1046/J.1529-8817.38.S1.73.X |
0.357 |
|
| 2002 |
Berges JA, Varela DE, Harrison PJ. Effects of temperature on growth rate, cell composition and nitrogen metabolism in the marine diatom Thalassiosira pseudonana (bacillariophyceae) Marine Ecology Progress Series. 225: 139-146. |
0.685 |
|
| 2001 |
Berges JA, Franklin DJ, Harrison PJ. Evolution of an artificial seawater medium: Improvements in enriched seawater, artificial water over the last two decades Journal of Phycology. 37: 1138-1145. DOI: 10.1046/J.1529-8817.2001.01052.X |
0.684 |
|
| 2001 |
Roberts D, Moore HM, Berges J, Patching JW, Carton MW, Eardly DF. Sediment distribution, hydrolytic enzyme profiles and bacterial activities in the guts of Oneirophanta mutabilis, Psychropotes longicauda and Pseudostichopus villosus: What do they tell us about digestive strategies of abyssal holothurians? Progress in Oceanography. 50: 443-458. DOI: 10.1016/S0079-6611(01)00065-9 |
0.343 |
|
| 1999 |
Boyd PW, Sherry ND, Berges JA, Bishop JKB, Calvert SE, Charette MA, Giovannoni SJ, Goldblatt R, Harrison PJ, Moran SB, Roy S, Soon M, Strom S, Thibault D, Vergin KL, et al. Transformations of biogenic particulates from the pelagic to the deep ocean realm Deep-Sea Research Part Ii: Topical Studies in Oceanography. 46: 2761-2792. DOI: 10.1016/S0967-0645(99)00083-1 |
0.757 |
|
| 1998 |
Berges JA, Falkowski PG. Physiological stress and cell death in marine phytoplankton: Induction of proteases in response to nitrogen or light limitation Limnology and Oceanography. 43: 129-135. DOI: 10.4319/Lo.1998.43.1.0129 |
0.566 |
|
| 1998 |
Vergara JJ, Berges JA, Falkowski PG. DIEL PERIODICITY OF NITRATE REDUCTASE ACTIVITY AND PROTEIN LEVELS IN THE MARINE DIATOM THALASSIOSIRA WEISSFLOGII (BACILLARIOPHYCEAE) Journal of Phycology. 34: 952-961. DOI: 10.1046/J.1529-8817.1998.340952.X |
0.524 |
|
| 1998 |
Boyd P, Berges JA, Harrison P. In vitro iron enrichment experiments at iron-rich and -poor sites in the NE subarctic Pacific Journal of Experimental Marine Biology and Ecology. 227: 133-151. DOI: 10.1016/S0022-0981(97)00264-5 |
0.408 |
|
| 1996 |
Berges JA, Charlebois DO, Mauzerall DC, Falkowski PG. Differential Effects of Nitrogen Limitation on Photosynthetic Efficiency of Photosystems I and II in Microalgae. Plant Physiology. 110: 689-696. PMID 12226211 DOI: 10.1104/Pp.110.2.689 |
0.524 |
|
| 1996 |
Berges JA, Falkowski PG. CELL-ASSOCIATED PROTEOLYTIC ENZYMES FROM MARINE PHYTOPLANKTON1 Journal of Phycology. 32: 566-574. DOI: 10.1111/J.0022-3646.1996.00566.X |
0.527 |
|
| 1996 |
Fisher AE, Berges JA, Harrison PJ. DOES LIGHT QUALITY AFFECT THE SINKING RATES OF MARINE DIATOMS?1 Journal of Phycology. 32: 353-360. DOI: 10.1111/J.0022-3646.1996.00353.X |
0.443 |
|
| 1995 |
Berges JA, Harrison PJ. Nitrate reductase activity quantitatively predicts the rate of nitrate incorporation under steady state light limitation: A revised assay and characterization of the enzyme in three species of marine phytoplankton Limnology and Oceanography. 40: 82-93. DOI: 10.4319/Lo.1995.40.1.0082 |
0.482 |
|
| 1995 |
Berges J, Cochlan W, Harrison P. Laboratory and field responses of algal nitrate reductase to diel periodicity in irradiance, nitrate exhaustion, and the presence of ammonium Marine Ecology Progress Series. 124: 259-269. DOI: 10.3354/meps124259 |
0.31 |
|
| 1995 |
Hurd CL, Berges JA, Osborne J, Harrison PJ. AN IN VITRO NITRATE REDUCTASE ASSAY FOR MARINE MACROALGAE: OPTIMIZATION AND CHARACTERIZATION OF THE ENZYME FOR FUCUS GARDNERI (PHAEOPHYTA)1 Journal of Phycology. 31: 835-843. DOI: 10.1111/J.0022-3646.1995.00835.X |
0.655 |
|
| 1995 |
Berges JA, Harrison PJ. RELATIONSHIPS BETWEEN NITRATE REDUCTASE ACTIVITY AND RATES OF GROWTH AND NITRATE INCORPORATION UNDER STEADY-STATE LIGHT OR NITRATE LIMITATION IN THE MARINE DIATOM THALASSIOSIRA PSEUDONANA (BACILLARIOPHYCEAE)1 Journal of Phycology. 31: 85-95. DOI: 10.1111/J.0022-3646.1995.00085.X |
0.473 |
|
| 1994 |
Montagnes DJS, Berges JA, Harrison PJ, Taylor FJR. Estimating carbon, nitrogen, protein, and chlorophyllafrom volume in marine phytoplankton Limnology and Oceanography. 39: 1044-1060. DOI: 10.4319/Lo.1994.39.5.1044 |
0.438 |
|
| 1994 |
Berges J, Montagnes D, Hurd C, Harrison P. Fitting ecological and physiological data to rectangular hyperbolae: a comparison of methods using Monte Carlo simulations Marine Ecology Progress Series. 114: 175-183. DOI: 10.3354/Meps114175 |
0.63 |
|
| 1993 |
Berges JA, Harrison PJ. RELATIONSHIP BETWEEN NUCLEOSIDE DIPHOSPHATE KINASE ACTIVITY AND LIGHT-LIMITED GROWTH RATE IN THE MARINE DIATOM THALASSIOSIRA PSEUDONANA (BAGILLARIOPHYCEAE)1 Journal of Phycology. 29: 45-53. DOI: 10.1111/J.1529-8817.1993.Tb00278.X |
0.473 |
|
| 1993 |
Berges JA, Roff JC, Ballantyne JS. Enzymatic indices of respiration and ammonia excretion: Relationships to body size and food levels Journal of Plankton Research. 15: 239-254. DOI: 10.1093/Plankt/15.2.239 |
0.619 |
|
| 1993 |
Berges JA, Fisher AE, Harrison PJ. A comparison of Lowry, Bradford and Smith protein assays using different protein standards and protein isolated from the marine diatom Thalassiosira pseudonana Marine Biology. 115: 187-193. DOI: 10.1007/Bf00346334 |
0.409 |
|
| 1990 |
Berges JA, Roff JC, Ballantyne JS. Relationship Between Body Size, Growth Rate, and Maximal Enzyme Activities in the Brine Shrimp, Artemia franciscana. The Biological Bulletin. 179: 287-296. PMID 29314970 DOI: 10.2307/1542320 |
0.598 |
|
| 1990 |
Hopcroft RR, Roff JC, Berges JA. Size-fractionated sedimentation in a tropical neritic ecosystem near Kingston, Jamaica Continental Shelf Research. 10: 795-806. DOI: 10.1016/0278-4343(90)90011-A |
0.571 |
|
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