| Year |
Citation |
Score |
| 2022 |
Sebastian H, Finkel SE. Absence of Ribosome Modulation Factor Alters Growth and Competitive Fitness of Escherichia coli. Microbiology Spectrum. 10: e0223921. PMID 35377189 DOI: 10.1128/spectrum.02239-21 |
0.343 |
|
| 2021 |
Osborne MG, Geiger CJ, Corzett CH, Kram KE, Finkel SE. Removal of Toxic Volatile Compounds in Batch Culture Prolongs Stationary Phase and Delays Death of Escherichia coli. Applied and Environmental Microbiology. 87: e0186021. PMID 34613759 DOI: 10.1128/AEM.01860-21 |
0.777 |
|
| 2021 |
Ratib NR, Seidl F, Ehrenreich IM, Finkel SE. Evolution in Long-Term Stationary-Phase Batch Culture: Emergence of Divergent Escherichia coli Lineages over 1,200 Days. Mbio. 12. PMID 33500336 DOI: 10.1128/mBio.03337-20 |
0.713 |
|
| 2019 |
Robador A, Amend JP, Finkel SE. Nanocalorimetry reveals growth dynamics of cells undergoing adaptive evolution during long-term stationary phase. Applied and Environmental Microbiology. PMID 31152016 DOI: 10.1128/Aem.00968-19 |
0.433 |
|
| 2018 |
Ferraro CM, Finkel SE. Physiological, Genetic, and Transcriptomic Analysis of Alcohol-Induced Delay of Bacterial Death in . Applied and Environmental Microbiology. PMID 30389772 DOI: 10.1128/Aem.02113-18 |
0.33 |
|
| 2018 |
Westphal LL, Lau J, Negro Z, Moreno IJ, Mohammed WI, Lee H, Tang H, Finkel SE, Kram KE. Adaptation of Escherichia coli to long-term batch culture in various rich media. Research in Microbiology. PMID 29454026 DOI: 10.1016/J.Resmic.2018.01.003 |
0.403 |
|
| 2018 |
Robador A, LaRowe DE, Finkel SE, Amend JP, Nealson KH. Changes in Microbial Energy Metabolism Measured by Nanocalorimetry during Growth Phase Transitions. Frontiers in Microbiology. 9: 109. PMID 29449836 DOI: 10.3389/Fmicb.2018.00109 |
0.348 |
|
| 2017 |
Kram KE, Geiger C, Ismail WM, Lee H, Tang H, Foster PL, Finkel SE. Adaptation of Escherichia coli to Long-Term Serial Passage in Complex Medium: Evidence of Parallel Evolution. Msystems. 2. PMID 28289732 DOI: 10.1128/mSystems.00192-16 |
0.301 |
|
| 2015 |
Kram KE, Finkel SE. Rich Medium Composition Affects Escherichia coli Survival, Glycation, and Mutation Frequency during Long-Term Batch Culture. Applied and Environmental Microbiology. 81: 4442-50. PMID 25911475 DOI: 10.1128/Aem.00722-15 |
0.431 |
|
| 2015 |
Calendar R, Lindqvist BH, Finkel SE, Haggård-Ljungqvist E. Obituaries: Anne M. Dranginis, Giuseppe Bertani Microbe Magazine. 10: 298-299. DOI: 10.1128/Microbe.10.298.2 |
0.514 |
|
| 2014 |
Kram KE, Finkel SE. Culture volume and vessel affect long-term survival, mutation frequency, and oxidative stress of Escherichia coli. Applied and Environmental Microbiology. 80: 1732-8. PMID 24375138 DOI: 10.1128/Aem.03150-13 |
0.434 |
|
| 2013 |
Riedel TE, Berelson WM, Nealson KH, Finkel SE. Oxygen consumption rates of bacteria under nutrient-limited conditions. Applied and Environmental Microbiology. 79: 4921-31. PMID 23770901 DOI: 10.1128/Aem.00756-13 |
0.425 |
|
| 2013 |
Corzett CH, Goodman MF, Finkel SE. Competitive fitness during feast and famine: how SOS DNA polymerases influence physiology and evolution in Escherichia coli. Genetics. 194: 409-20. PMID 23589461 DOI: 10.1534/Genetics.113.151837 |
0.78 |
|
| 2011 |
Yamanaka K, Minko IG, Finkel SE, Goodman MF, Lloyd RS. Role of high-fidelity Escherichia coli DNA polymerase I in replication bypass of a deoxyadenosine DNA-peptide cross-link. Journal of Bacteriology. 193: 3815-21. PMID 21622737 DOI: 10.1128/Jb.01550-10 |
0.357 |
|
| 2011 |
Biffinger JC, Fitzgerald LA, Ray R, Little BJ, Lizewski SE, Petersen ER, Ringeisen BR, Sanders WC, Sheehan PE, Pietron JJ, Baldwin JW, Nadeau LJ, Johnson GR, Ribbens M, Finkel SE, et al. The utility of Shewanella japonica for microbial fuel cells. Bioresource Technology. 102: 290-7. PMID 20663660 DOI: 10.1016/J.Biortech.2010.06.078 |
0.732 |
|
| 2011 |
Nealson KH, Finkel SE. Electron flow and biofilms Mrs Bulletin. 36: 380-384. DOI: 10.1557/Mrs.2011.69 |
0.339 |
|
| 2010 |
Pepper ED, Farrell MJ, Nord G, Finkel SE. Antiglycation effects of carnosine and other compounds on the long-term survival of Escherichia coli. Applied and Environmental Microbiology. 76: 7925-30. PMID 20952637 DOI: 10.1128/Aem.01369-10 |
0.694 |
|
| 2010 |
Gonidakis S, Finkel SE, Longo VD. Genome-wide screen identifies Escherichia coli TCA-cycle-related mutants with extended chronological lifespan dependent on acetate metabolism and the hypoxia-inducible transcription factor ArcA. Aging Cell. 9: 868-81. PMID 20707865 DOI: 10.1111/J.1474-9726.2010.00618.X |
0.4 |
|
| 2010 |
Gonidakis S, Finkel SE, Longo VD. E. coli hypoxia-inducible factor ArcA mediates lifespan extension in a lipoic acid synthase mutant by suppressing acetyl-CoA synthetase. Biological Chemistry. 391: 1139-47. PMID 20707605 DOI: 10.1515/Bc.2010.120 |
0.364 |
|
| 2009 |
Palchevskiy V, Finkel SE. A role for single-stranded exonucleases in the use of DNA as a nutrient. Journal of Bacteriology. 191: 3712-6. PMID 19329645 DOI: 10.1128/Jb.01678-08 |
0.755 |
|
| 2009 |
Kraigsley AM, Finkel SE. Adaptive evolution in single species bacterial biofilms. Fems Microbiology Letters. 293: 135-40. PMID 19239496 DOI: 10.1111/J.1574-6968.2009.01526.X |
0.768 |
|
| 2009 |
Biffinger JC, Ray R, Little BJ, Fitzgerald LA, Ribbens M, Finkel SE, Ringeisen BR. Simultaneous analysis of physiological and electrical output changes in an operating microbial fuel cell with Shewanella oneidensis. Biotechnology and Bioengineering. 103: 524-31. PMID 19189395 DOI: 10.1002/Bit.22266 |
0.743 |
|
| 2009 |
Biffinger J, Ribbens M, Ringeisen B, Pietron J, Finkel S, Nealson K. Characterization of electrochemically active bacteria utilizing a high-throughput voltage-based screening assay. Biotechnology and Bioengineering. 102: 436-44. PMID 18767193 DOI: 10.1002/Bit.22072 |
0.736 |
|
| 2008 |
Kumari A, Minko IG, Harbut MB, Finkel SE, Goodman MF, Lloyd RS. Replication bypass of interstrand cross-link intermediates by Escherichia coli DNA polymerase IV. The Journal of Biological Chemistry. 283: 27433-7. PMID 18697749 DOI: 10.1074/Jbc.M801237200 |
0.359 |
|
| 2007 |
Ren C, Webster P, Finkel SE, Tower J. Increased internal and external bacterial load during Drosophila aging without life-span trade-off. Cell Metabolism. 6: 144-52. PMID 17681150 DOI: 10.1016/J.Cmet.2007.06.006 |
0.351 |
|
| 2007 |
Skvortsov D, Abdueva D, Stitzer ME, Finkel SE, Tavaré S. Using expression arrays for copy number detection: an example from E. coli. Bmc Bioinformatics. 8: 203. PMID 17570850 DOI: 10.1186/1471-2105-8-203 |
0.311 |
|
| 2006 |
Pepper ED, Farrell MJ, Finkel SE. Role of penicillin-binding protein 1b in competitive stationary-phase survival of Escherichia coli. Fems Microbiology Letters. 263: 61-7. PMID 16958852 DOI: 10.1111/J.1574-6968.2006.00418.X |
0.696 |
|
| 2006 |
Palchevskiy V, Finkel SE. Escherichia coli competence gene homologs are essential for competitive fitness and the use of DNA as a nutrient. Journal of Bacteriology. 188: 3902-10. PMID 16707682 DOI: 10.1128/Jb.01974-05 |
0.742 |
|
| 2006 |
Finkel SE. Long-term survival during stationary phase: evolution and the GASP phenotype. Nature Reviews. Microbiology. 4: 113-20. PMID 16415927 DOI: 10.1038/Nrmicro1340 |
0.412 |
|
| 2004 |
Nair S, Finkel SE. Dps protects cells against multiple stresses during stationary phase. Journal of Bacteriology. 186: 4192-8. PMID 15205421 DOI: 10.1128/Jb.186.13.4192-4198.2004 |
0.59 |
|
| 2003 |
Farrell MJ, Finkel SE. The growth advantage in stationary-phase phenotype conferred by rpoS mutations is dependent on the pH and nutrient environment. Journal of Bacteriology. 185: 7044-52. PMID 14645263 DOI: 10.1128/Jb.185.24.7044-7052.2003 |
0.402 |
|
| 2002 |
Yeiser B, Pepper ED, Goodman MF, Finkel SE. SOS-induced DNA polymerases enhance long-term survival and evolutionary fitness. Proceedings of the National Academy of Sciences of the United States of America. 99: 8737-41. PMID 12060704 DOI: 10.1073/Pnas.092269199 |
0.721 |
|
| 2001 |
Finkel SE, Kolter R. DNA as a nutrient: novel role for bacterial competence gene homologs. Journal of Bacteriology. 183: 6288-93. PMID 11591672 DOI: 10.1128/Jb.183.21.6288-6293.2001 |
0.609 |
|
| 2001 |
Frenkiel-Krispin D, Levin-Zaidman S, Shimoni E, Wolf SG, Wachtel EJ, Arad T, Finkel SE, Kolter R, Minsky A. Regulated phase transitions of bacterial chromatin: a non-enzymatic pathway for generic DNA protection. The Embo Journal. 20: 1184-91. PMID 11230141 DOI: 10.1093/Emboj/20.5.1184 |
0.62 |
|
| 1999 |
Membrillo-Hernández J, Kwon O, De Wulf P, Finkel SE, Lin EC. Regulation of adhE (encoding ethanol oxidoreductase) by the Fis protein in Escherichia coli. Journal of Bacteriology. 181: 7390-3. PMID 10572146 DOI: 10.1128/Jb.181.23.7390-7393.1999 |
0.334 |
|
| 1999 |
Wolf SG, Frenkiel D, Arad T, Finkel SE, Kolter R, Minsky A. DNA protection by stress-induced biocrystallization. Nature. 400: 83-5. PMID 10403254 DOI: 10.1038/21918 |
0.58 |
|
| 1999 |
Finkel SE, Kolter R. Evolution of microbial diversity during prolonged starvation. Proceedings of the National Academy of Sciences of the United States of America. 96: 4023-7. PMID 10097156 DOI: 10.1073/Pnas.96.7.4023 |
0.589 |
|
| 1998 |
Grant RA, Filman DJ, Finkel SE, Kolter R, Hogle JM. The crystal structure of Dps, a ferritin homolog that binds and protects DNA. Nature Structural Biology. 5: 294-303. PMID 9546221 DOI: 10.1038/Nsb0498-294 |
0.544 |
|
| 1996 |
Pan CQ, Finkel SE, Cramton SE, Feng JA, Sigman DS, Johnson RC. Variable structures of Fis-DNA complexes determined by flanking DNA-protein contacts. Journal of Molecular Biology. 264: 675-95. PMID 8980678 DOI: 10.1006/jmbi.1996.0669 |
0.454 |
|
| 1994 |
Pan CQ, Feng JA, Finkel SE, Landgraf R, Sigman D, Johnson RC. Structure of the Escherichia coli Fis-DNA complex probed by protein conjugated with 1,10-phenanthroline copper(I) complex. Proceedings of the National Academy of Sciences of the United States of America. 91: 1721-5. PMID 8127871 DOI: 10.1073/Pnas.91.5.1721 |
0.451 |
|
| 1994 |
Yuan HS, Wang SS, Yang WZ, Finkel SE, Johnson RC. The structure of Fis mutant Pro61Ala illustrates that the kink within the long alpha-helix is not due to the presence of the proline residue. The Journal of Biological Chemistry. 269: 28947-54. PMID 7961857 |
0.385 |
|
| 1993 |
Finkel SE, Johnson RC. The Fis protein: it's not just for DNA inversion anymore. Molecular Microbiology. 7: 1023. PMID 8483413 |
0.421 |
|
| 1993 |
Gosink KK, Ross W, Leirmo S, Osuna R, Finkel SE, Johnson RC, Gourse RL. DNA binding and bending are necessary but not sufficient for Fis-dependent activation of rrnB P1. Journal of Bacteriology. 175: 1580-9. PMID 8449867 DOI: 10.1128/Jb.175.6.1580-1589.1993 |
0.437 |
|
| 1993 |
Yuan HS, Finkel SE, Johnson RC. The crystal structure of Fis mutant Pro61-Ala: the influence of proline residues on bending of the α-helix Acta Crystallographica Section a Foundations of Crystallography. 49: c62-c62. DOI: 10.1107/S0108767378098219 |
0.35 |
|
| 1992 |
Finkel SE, Johnson RC. The Fis protein: it's not just for DNA inversion anymore. Molecular Microbiology. 6: 3257-65. PMID 1484481 DOI: 10.1111/j.1365-2958.1992.tb02193.x |
0.467 |
|
| 1991 |
Yuan HS, Finkel SE, Feng JA, Kaczor-Grzeskowiak M, Johnson RC, Dickerson RE. The molecular structure of wild-type and a mutant Fis protein: relationship between mutational changes and recombinational enhancer function or DNA binding. Proceedings of the National Academy of Sciences of the United States of America. 88: 9558-62. PMID 1946369 DOI: 10.1073/Pnas.88.21.9558 |
0.454 |
|
| 1991 |
Osuna R, Finkel SE, Johnson RC. Identification of two functional regions in Fis: the N-terminus is required to promote Hin-mediated DNA inversion but not lambda excision. The Embo Journal. 10: 1593-603. PMID 1851089 DOI: 10.1002/J.1460-2075.1991.Tb07680.X |
0.458 |
|
| 1990 |
Ghisotti D, Finkel S, Halling C, Dehò G, Sironi G, Calendar R. Nonessential region of bacteriophage P4: DNA sequence, transcription, gene products, and functions. Journal of Virology. 64: 24-36. PMID 2403440 |
0.544 |
|
| 1990 |
Halling C, Calendar R, Christie GE, Dale EC, Dehò G, Finkel S, Flensburg J, Ghisotti D, Kahn ML, Lane KB. DNA sequence of satellite bacteriophage P4. Nucleic Acids Research. 18: 1649. PMID 2183201 DOI: 10.1093/Nar/18.6.1649 |
0.542 |
|
| 1986 |
Finkel S, Halling C, Calendar R. Selection of lambda Spi- transducing phages using the P2 old gene cloned onto a plasmid. Gene. 46: 65-9. PMID 3026928 DOI: 10.1016/0378-1119(86)90167-8 |
0.571 |
|
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