Year |
Citation |
Score |
2024 |
Niu K, Wang D, Zhang Y, Biju L, Liu N, Wang X, Wang L, Ren Z, Lu F, Yang X, Zhong D. Ultrafast Primary Dynamics and Isomerization Mechanism of a Far-Red Sensing Cyanobacteriochrome. The Journal of Physical Chemistry Letters. 5202-5207. PMID 38717357 DOI: 10.1021/acs.jpclett.4c00468 |
0.398 |
|
2024 |
Zhou Y, Tang S, Chen Z, Zhou Z, Huang J, Kang XW, Zou S, Wang B, Zhang T, Ding B, Zhong D. Origin of the multi-phasic quenching dynamics in the BLUF domains across the species. Nature Communications. 15: 623. PMID 38245518 DOI: 10.1038/s41467-023-44565-5 |
0.365 |
|
2023 |
Zhang Y, Yang J, Liu N, Wang L, Lu F, Chen J, Zhong D. Ultrafast Nonequilibrium Dynamics of Vibrationally Hot Electron Transfer in Flavodoxin. The Journal of Physical Chemistry Letters. 14: 10657-10663. PMID 38031667 DOI: 10.1021/acs.jpclett.3c02438 |
0.36 |
|
2022 |
Wu R, Yang C, Wang L, Zhong D. Ultrafast Dynamics of Fatty Acid Photodecarboxylase in Anionic Semiquinone State. The Journal of Physical Chemistry Letters. 13: 11023-11028. PMID 36413431 DOI: 10.1021/acs.jpclett.2c02183 |
0.324 |
|
2022 |
Zhou Z, Chen Z, Kang XW, Zhou Y, Wang B, Tang S, Zou S, Zhang Y, Hu Q, Bai F, Ding B, Zhong D. The nature of proton-coupled electron transfer in a blue light using flavin domain. Proceedings of the National Academy of Sciences of the United States of America. 119: e2203996119. PMID 35737837 DOI: 10.1073/pnas.2203996119 |
0.335 |
|
2022 |
Yang J, Zhang Y, Lu Y, Wang L, Lu F, Zhong D. Ultrafast Dynamics of Nonequilibrium Short-Range Electron Transfer in Semiquinone Flavodoxin. The Journal of Physical Chemistry Letters. 3202-3208. PMID 35377652 DOI: 10.1021/acs.jpclett.2c00057 |
0.394 |
|
2022 |
Li X, Liu Z, Ren H, Kundu M, Zhong FW, Wang L, Gao J, Zhong D. Dynamics and mechanism of dimer dissociation of photoreceptor UVR8. Nature Communications. 13: 93. PMID 35013256 DOI: 10.1038/s41467-021-27756-w |
0.664 |
|
2021 |
Yang J, Zhang Y, He TF, Lu Y, Wang L, Ding B, Zhong D. Ultrafast nonequilibrium dynamics of short-range protein electron transfer in flavodoxin. Physical Chemistry Chemical Physics : Pccp. 24: 382-391. PMID 34889914 DOI: 10.1039/d1cp04445a |
0.391 |
|
2021 |
Wang Y, Veglia G, Zhong D, Gao J. Activation mechanism of cryptochrome through an allosteric switch. Science Advances. 7. PMID 34144991 DOI: 10.1126/sciadv.abg3815 |
0.316 |
|
2021 |
Macro N, Chen L, Yang Y, Mondal T, Wang L, Horovitz A, Zhong D. Slowdown of Water Dynamics from the Top to the Bottom of the GroEL Cavity. The Journal of Physical Chemistry Letters. 5723-5730. PMID 34129341 DOI: 10.1021/acs.jpclett.1c01216 |
0.351 |
|
2020 |
Li X, Liu Z, Ren H, Kundu M, Wang L, Gao J, Zhong D. Dynamics and mechanism of light harvesting in UV photoreceptor UVR8. Chemical Science. 11: 12553-12569. PMID 34094455 DOI: 10.1039/d0sc04909c |
0.615 |
|
2020 |
Wang D, Li X, Wang L, Yang X, Zhong D. Elucidating Ultrafast Multiphasic Dynamics in Photoisomerization of Cyanobacteriochrome. The Journal of Physical Chemistry Letters. PMID 32940473 DOI: 10.1021/Acs.Jpclett.0C02467 |
0.482 |
|
2020 |
Li X, Ren H, Kundu M, Liu Z, Zhong FW, Wang L, Gao J, Zhong D. A leap in quantum efficiency through light harvesting in photoreceptor UVR8. Nature Communications. 11: 4316. PMID 32859932 DOI: 10.1038/S41467-020-17838-6 |
0.607 |
|
2020 |
Wang D, Li X, Zhang S, Wang L, Yang X, Zhong D. Revealing the origin of multiphasic dynamic behaviors in cyanobacteriochrome. Proceedings of the National Academy of Sciences of the United States of America. PMID 32759207 DOI: 10.1073/Pnas.2001114117 |
0.516 |
|
2020 |
Wang D, Qin Y, Zhang M, Li X, Wang L, Yang X, Zhong D. The Origin of Ultrafast Multiphasic Dynamics in Photoisomerization of Bacteriophytochrome. The Journal of Physical Chemistry Letters. PMID 32614188 DOI: 10.1021/Acs.Jpclett.0C01394 |
0.782 |
|
2020 |
Lu Y, Kundu M, Zhong D. Effects of nonequilibrium fluctuations on ultrafast short-range electron transfer dynamics. Nature Communications. 11: 2822. PMID 32499536 DOI: 10.1038/S41467-020-15535-Y |
0.448 |
|
2020 |
He J, Liu Z, Cao Z, Zhang H, Meng Y, Chen B, Zhong D. Visualizing the Redox Reaction Dynamics of Perovskite Nanocrystals in Real and Reciprocal Space. The Journal of Physical Chemistry Letters. PMID 32119555 DOI: 10.1021/Acs.Jpclett.0C00265 |
0.354 |
|
2020 |
Lu Y, Zhong D. Nonequilibrium dynamics of photoinduced forward and backward electron transfer reactions. The Journal of Chemical Physics. 152: 065102. PMID 32061242 DOI: 10.1063/1.5132814 |
0.482 |
|
2020 |
Houston P, Macro N, Kang M, Chen L, Yang J, Wang L, Wu Z, Zhong D. Ultrafast Dynamics of Water-Protein Coupled Motions Around the Surface of Eye Crystallin. Journal of the American Chemical Society. PMID 31991083 DOI: 10.1021/Jacs.9B13506 |
0.456 |
|
2019 |
Wang D, Qin Y, Zhang S, Wang L, Yang X, Zhong D. Elucidating the Molecular Mechanism of Ultrafast Pfr-State Photoisomerization in Bathy Bacteriophytochrome PaBphP. The Journal of Physical Chemistry Letters. 6197-6201. PMID 31577445 DOI: 10.1021/Acs.Jpclett.9B02446 |
0.764 |
|
2019 |
Lu Y, Zhong D. Understanding of Short-Range Electron Transfer Dynamics in Proteins. The Journal of Physical Chemistry Letters. PMID 30607958 DOI: 10.1021/Acs.Jpclett.8B03749 |
0.464 |
|
2018 |
Wang X, Zhou Z, Tang Y, Chen J, Zhong D, Xu JH. Excited State Decay Pathways of 2'-deoxy-5-Methylcytidine and Deoxycytidine Revisited in Solution: A Comprehensive Kinetic Study by Femtosecond Transient Absorption. The Journal of Physical Chemistry. B. PMID 29939745 DOI: 10.1021/Acs.Jpcb.8B00927 |
0.386 |
|
2018 |
Kundu M, He TF, Lu Y, Wang L, Zhong D. Short-Range Electron Transfer in Reduced Flavodoxin: Ultrafast Nonequilibrium Dynamics Coupled with Protein Fluctuations. The Journal of Physical Chemistry Letters. PMID 29722985 DOI: 10.1021/Acs.Jpclett.8B00882 |
0.487 |
|
2017 |
Zhang M, Wang L, Zhong D. Photolyase: Dynamics and electron-transfer mechanisms of DNA repair. Archives of Biochemistry and Biophysics. PMID 28802828 DOI: 10.1016/J.Abb.2017.08.007 |
0.455 |
|
2017 |
Yang J, Wang Y, Wang L, Zhong D. Mapping Hydration Dynamics Around a β-Barrel Protein. Journal of the American Chemical Society. PMID 28248506 DOI: 10.1021/Jacs.6B12463 |
0.465 |
|
2017 |
Qin Y, Zhang L, Wang L, Zhong D. Observation of the Global Dynamic Collectivity of a Hydration Shell Around Apomyoglobin. The Journal of Physical Chemistry Letters. PMID 28212034 DOI: 10.1021/Acs.Jpclett.7B00205 |
0.784 |
|
2016 |
Zhang M, Wang L, Zhong D. Photolyase: Dynamics and Mechanisms of Repair of Sun-Induced DNA Damage. Photochemistry and Photobiology. PMID 27991674 DOI: 10.1111/Php.12695 |
0.465 |
|
2016 |
Zhang M, Wang L, Shu S, Sancar A, Zhong D. Bifurcating electron-transfer pathways in DNA photolyases determine the repair quantum yield. Science (New York, N.Y.). 354: 209-213. PMID 27738168 DOI: 10.1126/Science.Aah6071 |
0.372 |
|
2016 |
Qin Y, Jia M, Yang J, Wang D, Wang L, Xu J, Zhong D. The Molecular Origin of Ultrafast Water-Protein Coupled Interactions. The Journal of Physical Chemistry Letters. PMID 27700094 DOI: 10.1021/Acs.Jpclett.6B01954 |
0.77 |
|
2016 |
Gu X, Park SY, Tonelli M, Cornilescu G, Xia T, Zhong D, Schroeder SJ. NMR Structures and Dynamics in a Prohead RNA Bulge Loop that Specifically Binds Metal Ions. The Journal of Physical Chemistry Letters. PMID 27631837 DOI: 10.1021/Acs.Jpclett.6B01465 |
0.536 |
|
2016 |
Qin Y, Wang L, Zhong D. Dynamics and mechanism of ultrafast water-protein interactions. Proceedings of the National Academy of Sciences of the United States of America. PMID 27339138 DOI: 10.1073/Pnas.1602916113 |
0.781 |
|
2016 |
Faraji S, Zhong D, Dreuw A. Characterization of the Intermediate in and Identification of the Repair Mechanism of (6-4) Photolesions by Photolyases. Angewandte Chemie (International Ed. in English). PMID 26996356 DOI: 10.1002/Anie.201511950 |
0.38 |
|
2015 |
Zhong D, Jia M, Yang J, Qin Y, Wang D, Pan H, Wang L, Xu J. Determination of Protein Surface Hydration by Systematic Charge Mutations. The Journal of Physical Chemistry Letters. PMID 26636354 DOI: 10.1021/Acs.Jpclett.5B02530 |
0.779 |
|
2015 |
Gao J, Wang X, Zhang M, Bian M, Deng W, Zuo Z, Yang Z, Zhong D, Lin C. Trp triad-dependent rapid photoreduction is not required for the function of Arabidopsis CRY1. Proceedings of the National Academy of Sciences of the United States of America. PMID 26106155 DOI: 10.1073/Pnas.1504404112 |
0.314 |
|
2015 |
Tan C, Liu Z, Li J, Guo X, Wang L, Sancar A, Zhong D. The molecular origin of high DNA-repair efficiency by photolyase. Nature Communications. 6: 7302. PMID 26065359 DOI: 10.1038/Ncomms8302 |
0.668 |
|
2015 |
Liu Z, Wang L, Zhong D. Dynamics and mechanisms of DNA repair by photolyase. Physical Chemistry Chemical Physics : Pccp. 17: 11933-49. PMID 25870862 DOI: 10.1039/C4Cp05286B |
0.688 |
|
2015 |
Zhong D. Electron transfer mechanisms of DNA repair by photolyase. Annual Review of Physical Chemistry. 66: 691-715. PMID 25830375 DOI: 10.1146/Annurev-Physchem-040513-103631 |
0.44 |
|
2015 |
Gao G, Li Y, Wang W, Zhong D, Wang S, Gong Q. Picosecond time-resolved fluorescent spectroscopy of 1-anilino-8-naphthalene sulfonate binding with staphylococcal nuclease in the native and molten globule states. Journal of Photochemistry and Photobiology. B, Biology. 145: 60-5. PMID 25771383 DOI: 10.1016/J.Jphotobiol.2015.02.018 |
0.34 |
|
2015 |
Guo X, Liu Z, Song Q, Wang L, Zhong D. Dynamics and mechanism of UV-damaged DNA repair in indole-thymine dimer adduct: molecular origin of low repair quantum efficiency. The Journal of Physical Chemistry. B. 119: 3446-55. PMID 25635531 DOI: 10.1021/Jp512413T |
0.688 |
|
2015 |
Gao GY, Li Y, Wang W, Zhong DP, Wang SF, Gong QH. Spectroscopic characterization of staphylococcal nuclease mutants with tryptophan at internal sites Chinese Physics Letters. 32. DOI: 10.1088/0256-307X/32/4/048701 |
0.425 |
|
2015 |
Zhang M, Liu Z, Li J, Wang L, Zhong D. Study of Proton Transfer in Escherichia Coli Photolyase Biophysical Journal. 108: 378a-379a. DOI: 10.1016/J.Bpj.2014.11.2077 |
0.672 |
|
2014 |
Yang Y, Qin Y, Ding Q, Bakhtina M, Wang L, Tsai MD, Zhong D. Ultrafast water dynamics at the interface of the polymerase-DNA binding complex. Biochemistry. 53: 5405-13. PMID 25105470 DOI: 10.1021/Bi500810A |
0.763 |
|
2014 |
Tan C, Guo L, Ai Y, Li J, Wang L, Sancar A, Luo Y, Zhong D. Direct determination of resonance energy transfer in photolyase: structural alignment for the functional state. The Journal of Physical Chemistry. A. 118: 10522-30. PMID 25000823 DOI: 10.1021/Jp504349B |
0.365 |
|
2014 |
Liu Z, Tan C, Guo X, Li J, Wang L, Zhong D. Dynamic Determination of Active-Site Reactivity in Semiquinone Photolyase by the Cofactor Photoreduction. The Journal of Physical Chemistry Letters. 5: 820-825. PMID 24803991 DOI: 10.1021/Jz500077S |
0.679 |
|
2014 |
Liu Z, Li X, Zhong FW, Li J, Wang L, Shi Y, Zhong D. Quenching Dynamics of Ultraviolet-Light Perception by UVR8 Photoreceptor. The Journal of Physical Chemistry Letters. 5: 69-72. PMID 24490003 DOI: 10.1021/Jz402396K |
0.683 |
|
2014 |
Ozturk N, Selby CP, Zhong D, Sancar A. Mechanism of photosignaling by Drosophila cryptochrome: role of the redox status of the flavin chromophore. The Journal of Biological Chemistry. 289: 4634-42. PMID 24379403 DOI: 10.1074/Jbc.M113.542498 |
0.351 |
|
2013 |
Qin Y, Yang Y, Zhang L, Fowler JD, Qiu W, Wang L, Suo Z, Zhong D. Direct probing of solvent accessibility and mobility at the binding interface of polymerase (Dpo4)-DNA complex. The Journal of Physical Chemistry. A. 117: 13926-34. PMID 24308461 DOI: 10.1021/Jp410051W |
0.774 |
|
2013 |
He TF, Guo L, Guo X, Chang CW, Wang L, Zhong D. Femtosecond dynamics of short-range protein electron transfer in flavodoxin. Biochemistry. 52: 9120-8. PMID 24289221 DOI: 10.1021/Bi401137U |
0.455 |
|
2013 |
Liu Z, Tan C, Guo X, Li J, Wang L, Sancar A, Zhong D. Determining complete electron flow in the cofactor photoreduction of oxidized photolyase. Proceedings of the National Academy of Sciences of the United States of America. 110: 12966-71. PMID 23882080 DOI: 10.1073/Pnas.1311073110 |
0.665 |
|
2013 |
Liu Z, Zhang M, Guo X, Tan C, Li J, Wang L, Sancar A, Zhong D. Dynamic determination of the functional state in photolyase and the implication for cryptochrome. Proceedings of the National Academy of Sciences of the United States of America. 110: 12972-7. PMID 23882072 DOI: 10.1073/Pnas.1311077110 |
0.699 |
|
2012 |
Qin Y, Chang CW, Wang L, Zhong D. Validation of response function construction and probing heterogeneous protein hydration by intrinsic tryptophan. The Journal of Physical Chemistry. B. 116: 13320-30. PMID 23075091 DOI: 10.1021/Jp305118N |
0.774 |
|
2012 |
Yang J, Zhang L, Wang L, Zhong D. Femtosecond conical intersection dynamics of tryptophan in proteins and validation of slowdown of hydration layer dynamics. Journal of the American Chemical Society. 134: 16460-3. PMID 22992183 DOI: 10.1021/Ja305283J |
0.506 |
|
2012 |
Kao YT, Guo X, Yang Y, Liu Z, Hassanali A, Song QH, Wang L, Zhong D. Ultrafast dynamics of nonequilibrium electron transfer in photoinduced redox cycle: solvent mediation and conformation flexibility. The Journal of Physical Chemistry. B. 116: 9130-40. PMID 22735101 DOI: 10.1021/Jp304518F |
0.663 |
|
2012 |
Liu Z, Guo X, Tan C, Li J, Kao YT, Wang L, Sancar A, Zhong D. Electron tunneling pathways and role of adenine in repair of cyclobutane pyrimidine dimer by DNA photolyase. Journal of the American Chemical Society. 134: 8104-14. PMID 22533849 DOI: 10.1021/Ja2105009 |
0.66 |
|
2012 |
Kao YT, Song QH, Saxena C, Wang L, Zhong D. Dynamics and mechanism of DNA repair in a biomimetic system: flavin-thymine dimer adduct. Journal of the American Chemical Society. 134: 1501-3. PMID 22239341 DOI: 10.1021/Ja2112788 |
0.45 |
|
2012 |
Stevens JA, Link JJ, Zang C, Wang L, Zhong D. Ultrafast dynamics of nonequilibrium resonance energy transfer and probing globular protein flexibility of myoglobin. The Journal of Physical Chemistry. A. 116: 2610-9. PMID 21863851 DOI: 10.1021/Jp206106J |
0.805 |
|
2011 |
Li X, Wang Q, Yu X, Liu H, Yang H, Zhao C, Liu X, Tan C, Klejnot J, Zhong D, Lin C. Arabidopsis cryptochrome 2 (CRY2) functions by the photoactivation mechanism distinct from the tryptophan (trp) triad-dependent photoreduction. Proceedings of the National Academy of Sciences of the United States of America. 108: 20844-9. PMID 22139370 DOI: 10.1073/Pnas.1114579108 |
0.322 |
|
2011 |
Liu Z, Tan C, Guo X, Kao YT, Li J, Wang L, Sancar A, Zhong D. Dynamics and mechanism of cyclobutane pyrimidine dimer repair by DNA photolyase. Proceedings of the National Academy of Sciences of the United States of America. 108: 14831-6. PMID 21804035 DOI: 10.1073/Pnas.1110927108 |
0.67 |
|
2011 |
Hassanali AA, Zhong D, Singer SJ. An AIMD study of the CPD repair mechanism in water: reaction free energy surface and mechanistic implications. The Journal of Physical Chemistry. B. 115: 3848-59. PMID 21417374 DOI: 10.1021/Jp107722Z |
0.423 |
|
2011 |
Hassanali AA, Zhong D, Singer SJ. An AIMD study of CPD repair mechanism in water: role of solvent in ring splitting. The Journal of Physical Chemistry. B. 115: 3860-71. PMID 21417372 DOI: 10.1021/Jp107723W |
0.309 |
|
2011 |
Ozturk N, Selby CP, Annayev Y, Zhong D, Sancar A. Reaction mechanism of Drosophila cryptochrome. Proceedings of the National Academy of Sciences of the United States of America. 108: 516-21. PMID 21187431 DOI: 10.1073/Pnas.1017093108 |
0.326 |
|
2011 |
Zhong D, Pal SK, Zewail AH. Biological water: A critique Chemical Physics Letters. 503: 1-11. DOI: 10.1016/J.Cplett.2010.12.077 |
0.695 |
|
2010 |
Liu B, Liu H, Zhong D, Lin C. Searching for a photocycle of the cryptochrome photoreceptors. Current Opinion in Plant Biology. 13: 578-86. PMID 20943427 DOI: 10.1016/J.Pbi.2010.09.005 |
0.356 |
|
2010 |
Chang CW, He TF, Guo L, Stevens JA, Li T, Wang L, Zhong D. Mapping solvation dynamics at the function site of flavodoxin in three redox states. Journal of the American Chemical Society. 132: 12741-7. PMID 20731381 DOI: 10.1021/Ja1050154 |
0.503 |
|
2010 |
Li J, Liu Z, Tan C, Guo X, Wang L, Sancar A, Zhong D. Dynamics and mechanism of repair of ultraviolet-induced (6-4) photoproduct by photolyase. Nature. 466: 887-890. PMID 20657578 DOI: 10.1038/Nature09192 |
0.692 |
|
2010 |
Chang CW, Guo L, Kao YT, Li J, Tan C, Li T, Saxena C, Liu Z, Wang L, Sancar A, Zhong D. Ultrafast solvation dynamics at binding and active sites of photolyases. Proceedings of the National Academy of Sciences of the United States of America. 107: 2914-9. PMID 20133751 DOI: 10.1073/Pnas.1000001107 |
0.722 |
|
2010 |
Stevens JA, Link JJ, Kao YT, Zang C, Wang L, Zhong D. Ultrafast dynamics of resonance energy transfer in myoglobin: probing local conformation fluctuations. The Journal of Physical Chemistry. B. 114: 1498-505. PMID 20047308 DOI: 10.1021/Jp910013F |
0.806 |
|
2010 |
Zhong D. From Femtochemistry to 4D Microscopy Science China Physics, Mechanics and Astronomy. 53: 977-986. DOI: 10.1007/S11433-010-3219-7 |
0.316 |
|
2009 |
Zhang L, Yang Y, Kao YT, Wang L, Zhong D. Protein hydration dynamics and molecular mechanism of coupled water-protein fluctuations. Journal of the American Chemical Society. 131: 10677-91. PMID 19586028 DOI: 10.1021/Ja902918P |
0.464 |
|
2009 |
Zang C, Stevens JA, Link JJ, Guo L, Wang L, Zhong D. Ultrafast proteinquake dynamics in cytochrome c. Journal of the American Chemical Society. 131: 2846-52. PMID 19203189 DOI: 10.1021/Ja8057293 |
0.806 |
|
2009 |
Hassanali A, Zhong D, Singer S. Molecular Mechanisms in the Repair of the Cyclobutane Dimer Biophysical Journal. 96: 342a. DOI: 10.1016/J.Bpj.2008.12.1717 |
0.396 |
|
2009 |
Li T, Hassanali AA, Zhong D, Singer SJ. Hydration Dynamics As Revealed By The Fluorescence Stokes Shift: The Origin Of Slow Hydration Dynamics And Breakdown Of Linear Response Biophysical Journal. 96: 302a. DOI: 10.1016/J.Bpj.2008.12.1503 |
0.525 |
|
2009 |
Zhong D. Hydration dynamics and coupled water-protein fluctuations probed by intrinsic tryptophan Advances in Chemical Physics. 143: 83-149. DOI: 10.1002/9780470508602.ch3 |
0.347 |
|
2008 |
Oztürk N, Kao YT, Selby CP, Kavakli IH, Partch CL, Zhong D, Sancar A. Purification and characterization of a type III photolyase from Caulobacter crescentus. Biochemistry. 47: 10255-61. PMID 18771290 DOI: 10.1021/Bi801085A |
0.337 |
|
2008 |
Kao YT, Saxena C, He TF, Guo L, Wang L, Sancar A, Zhong D. Ultrafast dynamics of flavins in five redox states. Journal of the American Chemical Society. 130: 13132-9. PMID 18767842 DOI: 10.1021/Ja8045469 |
0.497 |
|
2008 |
Kao YT, Tan C, Song SH, Oztürk N, Li J, Wang L, Sancar A, Zhong D. Ultrafast dynamics and anionic active states of the flavin cofactor in cryptochrome and photolyase. Journal of the American Chemical Society. 130: 7695-701. PMID 18500802 DOI: 10.1021/Ja801152H |
0.492 |
|
2008 |
Qiu W, Li T, Zhang L, Yang Y, Kao Y, Wang L, Zhong D. Ultrafast quenching of tryptophan fluorescence in proteins: Interresidue and intrahelical electron transfer Chemical Physics. 350: 154-164. DOI: 10.1016/J.Chemphys.2008.01.061 |
0.492 |
|
2007 |
Oztürk N, Song SH, Ozgür S, Selby CP, Morrison L, Partch C, Zhong D, Sancar A. Structure and function of animal cryptochromes. Cold Spring Harbor Symposia On Quantitative Biology. 72: 119-31. PMID 18419269 DOI: 10.1101/Sqb.2007.72.015 |
0.349 |
|
2007 |
Zhang L, Wang L, Kao YT, Qiu W, Yang Y, Okobiah O, Zhong D. Mapping hydration dynamics around a protein surface. Proceedings of the National Academy of Sciences of the United States of America. 104: 18461-6. PMID 18003912 DOI: 10.1073/Pnas.0707647104 |
0.506 |
|
2007 |
Kao YT, Saxena C, Wang L, Sancar A, Zhong D. Femtochemistry in enzyme catalysis: DNA photolyase. Cell Biochemistry and Biophysics. 48: 32-44. PMID 17703066 DOI: 10.1007/S12013-007-0034-5 |
0.495 |
|
2007 |
Song SH, Oztürk N, Denaro TR, Arat NO, Kao YT, Zhu H, Zhong D, Reppert SM, Sancar A. Formation and function of flavin anion radical in cryptochrome 1 blue-light photoreceptor of monarch butterfly. The Journal of Biological Chemistry. 282: 17608-12. PMID 17459876 DOI: 10.1074/Jbc.M702874200 |
0.354 |
|
2007 |
Qiu W, Wang L, Lu W, Boechler A, Sanders DA, Zhong D. Dissection of complex protein dynamics in human thioredoxin. Proceedings of the National Academy of Sciences of the United States of America. 104: 5366-71. PMID 17369362 DOI: 10.1073/Pnas.0608498104 |
0.566 |
|
2007 |
Zhong D. Ultrafast catalytic processes in enzymes. Current Opinion in Chemical Biology. 11: 174-81. PMID 17353141 DOI: 10.1016/J.Cbpa.2007.02.034 |
0.42 |
|
2007 |
Li T, Hassanali AA, Kao YT, Zhong D, Singer SJ. Hydration dynamics and time scales of coupled water-protein fluctuations. Journal of the American Chemical Society. 129: 3376-82. PMID 17319669 DOI: 10.1021/Ja0685957 |
0.512 |
|
2006 |
Kim J, Lu W, Qiu W, Wang L, Caffrey M, Zhong D. Ultrafast hydration dynamics in the lipidic cubic phase: Discrete water structures in nanochannels. The Journal of Physical Chemistry. B. 110: 21994-2000. PMID 17064169 DOI: 10.1021/Jp062806C |
0.459 |
|
2006 |
Zhang L, Kao YT, Qiu W, Wang L, Zhong D. Femtosecond studies of tryptophan fluorescence dynamics in proteins: local solvation and electronic quenching. The Journal of Physical Chemistry. B. 110: 18097-103. PMID 16970418 DOI: 10.1021/Jp063025E |
0.492 |
|
2006 |
Qiu W, Kao YT, Zhang L, Yang Y, Wang L, Stites WE, Zhong D, Zewail AH. Protein surface hydration mapped by site-specific mutations. Proceedings of the National Academy of Sciences of the United States of America. 103: 13979-84. PMID 16968773 DOI: 10.1073/Pnas.0606235103 |
0.631 |
|
2006 |
Qiu W, Zhang L, Okobiah O, Yang Y, Wang L, Zhong D, Zewail AH. Ultrafast solvation dynamics of human serum albumin: correlations with conformational transitions and site-selected recognition. The Journal of Physical Chemistry. B. 110: 10540-9. PMID 16722765 DOI: 10.1021/Jp055989W |
0.605 |
|
2006 |
Hassanali AA, Li T, Zhong D, Singer SJ. A molecular dynamics study of Lys-Trp-Lys: structure and dynamics in solution following photoexcitation. The Journal of Physical Chemistry. B. 110: 10497-508. PMID 16722759 DOI: 10.1021/Jp0601926 |
0.547 |
|
2006 |
Zhong D. Ultrafast protein dynamics Femtochemistry Vii. 346-356. DOI: 10.1016/B978-044452821-6/50049-6 |
0.394 |
|
2005 |
Qiu W, Zhang L, Kao YT, Lu W, Li T, Kim J, Sollenberger GM, Wang L, Zhong D. Ultrafast hydration dynamics in melittin folding and aggregation: helix formation and tetramer self-assembly. The Journal of Physical Chemistry. B. 109: 16901-10. PMID 16853151 DOI: 10.1021/Jp0511754 |
0.437 |
|
2005 |
Wang H, Saxena C, Quan D, Sancar A, Zhong D. Femtosecond dynamics of flavin cofactor in DNA photolyase: radical reduction, local solvation, and charge recombination. The Journal of Physical Chemistry. B. 109: 1329-33. PMID 16851098 DOI: 10.1021/Jp044652B |
0.519 |
|
2005 |
Kao YT, Saxena C, Wang L, Sancar A, Zhong D. Direct observation of thymine dimer repair in DNA by photolyase. Proceedings of the National Academy of Sciences of the United States of America. 102: 16128-32. PMID 16169906 DOI: 10.1073/Pnas.0506586102 |
0.485 |
|
2005 |
Saxena C, Wang H, Kavakli IH, Sancar A, Zhong D. Ultrafast dynamics of resonance energy transfer in cryptochrome. Journal of the American Chemical Society. 127: 7984-5. PMID 15926801 DOI: 10.1021/Ja0421607 |
0.46 |
|
2004 |
Saxena C, Sancar A, Zhong D. Femtosecond dynamics of DNA photolyase: Energy transfer of antenna initiation and electron transfer of cofactor reduction Journal of Physical Chemistry B. 108: 18026-18033. DOI: 10.1021/Jp048376C |
0.45 |
|
2004 |
Lu W, Qiu W, Kim J, Okobiah O, Hu J, Gokel GW, Zhong D. Femtosecond studies of crown ethers: Supramolecular solvation, local solvent structure and cation-π interaction Chemical Physics Letters. 394: 415-422. DOI: 10.1016/J.Cplett.2004.07.032 |
0.375 |
|
2004 |
Lu W, Kim J, Qiu W, Zhong D. Femtosecond studies of tryptophan solvation: correlation function and water dynamics at lipid surfaces Chemical Physics Letters. 388: 120-126. DOI: 10.1016/J.Cplett.2004.03.012 |
0.433 |
|
2002 |
Zhong D, Pal SK, Zhang D, Chan SI, Zewail AH. Femtosecond dynamics of rubredoxin: tryptophan solvation and resonance energy transfer in the protein. Proceedings of the National Academy of Sciences of the United States of America. 99: 13-8. PMID 11752400 DOI: 10.1073/Pnas.012582399 |
0.715 |
|
2001 |
Zhong D, Pal SK, Zewail AH. Femtosecond studies of protein-DNA binding and dynamics: histone I. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 2: 219-27. PMID 23696483 DOI: 10.1002/1439-7641(20010417)2:4<219::Aid-Cphc219>3.0.Co;2-K |
0.692 |
|
2001 |
Qu X, Wan C, Becker HC, Zhong D, Zewail AH. The anticancer drug-DNA complex: femtosecond primary dynamics for anthracycline antibiotics function. Proceedings of the National Academy of Sciences of the United States of America. 98: 14212-7. PMID 11724924 DOI: 10.1073/Pnas.241509698 |
0.503 |
|
2001 |
Zhong D, Pal SK, Wan C, Zewail AH. Femtosecond dynamics of a drug-protein complex: daunomycin with Apo riboflavin-binding protein. Proceedings of the National Academy of Sciences of the United States of America. 98: 11873-8. PMID 11592998 DOI: 10.1073/Pnas.211440298 |
0.704 |
|
2001 |
Zhong D, Zewail AH. Femtosecond dynamics of flavoproteins: charge separation and recombination in riboflavine (vitamin B2)-binding protein and in glucose oxidase enzyme. Proceedings of the National Academy of Sciences of the United States of America. 98: 11867-72. PMID 11592997 DOI: 10.1073/Pnas.211440398 |
0.599 |
|
2000 |
Zhong D, Douhal A, Zewail AH. Femtosecond studies of protein-ligand hydrophobic binding and dynamics: human serum albumin. Proceedings of the National Academy of Sciences of the United States of America. 97: 14056-61. PMID 11106379 DOI: 10.1073/Pnas.250491297 |
0.59 |
|
1999 |
Zhong D, Zewail AH. Femtosecond dynamics of dative bonding: concepts of reversible and dissociative electron transfer reactions. Proceedings of the National Academy of Sciences of the United States of America. 96: 2602-7. PMID 10077556 DOI: 10.1073/Pnas.96.6.2602 |
0.576 |
|
1999 |
Zhong D, Zewail AH. Femtosecond dynamics of dative bonding: Concepts of reversible and dissociative electron transfer reactions Proceedings of the National Academy of Sciences of the United States of America. 96: 2602-2607. DOI: 10.1073/pnas.96.6.2602 |
0.52 |
|
1999 |
Zhong D, Bernhardt TM, Zewail AH. Femtosecond Real-Time Probing of Reactions. 24. Time, Velocity, and Orientation Mapping of the Dynamics of Dative Bonding in Bimolecular Electron Transfer Reactions† The Journal of Physical Chemistry A. 103: 10093-10117. DOI: 10.1021/Jp9919359 |
0.594 |
|
1998 |
Zhong D, Zewail AH. Femtosecond Real-Time Probing of Reactions. 23. Studies of Temporal, Velocity, Angular, and State Dynamics from Transition States to Final Products by Femtosecond-Resolved Mass Spectrometry The Journal of Physical Chemistry A. 102: 4031-4058. DOI: 10.1021/Jp9805196 |
0.583 |
|
1998 |
Zhong D, Diau EWG, Bernhardt TM, De Feyter S, Roberts JD, Zewail AH. Femtosecond dynamics of valence-bond isomers of azines: Transition states and conical intersections Chemical Physics Letters. 298: 129-140. DOI: 10.1016/S0009-2614(98)01160-9 |
0.441 |
|
1997 |
Zhong D, Ahmad S, Zewail AH. Femtosecond Elimination Reaction Dynamics Journal of the American Chemical Society. 119: 5978-5979. DOI: 10.1021/Ja9710013 |
0.549 |
|
1997 |
Zhong D, Ahmad S, Cheng PY, Zewail AH. Femtosecond Nucleophilic Substitution Reaction Dynamics Journal of the American Chemical Society. 119: 2305-2306. DOI: 10.1021/Ja963879K |
0.504 |
|
1996 |
Zhong D, Cheng PY, Zewail AH. Bimolecular reactions observed by femtosecond detachment to aligned transition states: Inelastic and reactive dynamics The Journal of Chemical Physics. 105: 7864-7867. DOI: 10.1063/1.472606 |
0.586 |
|
1996 |
Cheng PY, Zhong D, Zewail AH. Femtosecond real‐time probing of reactions. XXI. Direct observation of transition‐state dynamics and structure in charge‐transfer reactions The Journal of Chemical Physics. 105: 6216-6248. DOI: 10.1063/1.472478 |
0.576 |
|
1995 |
Cheng PY, Zhong D, Zewail AH. Transition states of charge‐transfer reactions: Femtosecond dynamics and the concept of harpooning in the bimolecular reaction of benzene with iodine The Journal of Chemical Physics. 103: 5153-5156. DOI: 10.1063/1.470603 |
0.39 |
|
1995 |
Cheng PY, Zhong D, Zewail AH. Femtosecond Velocity-Gating of Complex Structures in Solvent Cages The Journal of Physical Chemistry. 99: 15733-15737. DOI: 10.1021/J100043A009 |
0.485 |
|
1995 |
Cheng P, Zhong D, Zewail A. Microscopic solvation and femtochemistry of charge-transfer reactions: the problem of benzene(s)-iodine binary complexes and their solvent structures Chemical Physics Letters. 242: 369-379. DOI: 10.1016/0009-2614(95)00780-8 |
0.611 |
|
1995 |
Cheng P, Zhong D, Zewail AH. Kinetic-energy, femtosecond resolved reaction dynamics. Modes of dissociation (in iodobenzene) from time-velocity correlations Chemical Physics Letters. 237: 399-405. DOI: 10.1016/0009-2614(95)00364-A |
0.551 |
|
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