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Douglas S. Kim, Ph.D. - Publications

Affiliations: 
GENIE Project HHMI Janelia Farm Research Campus, Ashburn, VA, United States 
Area:
Neuroscience
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32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Abdelfattah AS, Valenti R, Zheng J, Wong A, Podgorski K, Koyama M, Kim DS, Schreiter ER. A general approach to engineer positive-going eFRET voltage indicators. Nature Communications. 11: 3444. PMID 32651384 DOI: 10.1038/S41467-020-17322-1  0.34
2020 Mohr MA, Bushey D, Aggarwal A, Marvin JS, Kim JJ, Marquez EJ, Liang Y, Patel R, Macklin JJ, Lee CY, Tsang A, Tsegaye G, Ahrens AM, Chen JL, Kim DS, et al. jYCaMP: an optimized calcium indicator for two-photon imaging at fiber laser wavelengths. Nature Methods. PMID 32451475 DOI: 10.1038/S41592-020-0835-7  0.324
2019 Shen Y, Dana H, Abdelfattah AS, Patel R, Shea J, Molina RS, Rawal B, Rancic V, Chang YF, Wu L, Chen Y, Qian Y, Wiens MD, Hambleton N, Ballanyi K, ... ... Kim DS, et al. Correction to: A genetically encoded Ca indicator based on circularly permutated sea anemone red fluorescent protein eqFP578. Bmc Biology. 17: 85. PMID 31666064 DOI: 10.1186/S12915-019-0707-8  0.308
2019 Dana H, Sun Y, Mohar B, Hulse BK, Kerlin AM, Hasseman JP, Tsegaye G, Tsang A, Wong A, Patel R, Macklin JJ, Chen Y, Konnerth A, Jayaraman V, Looger LL, ... ... Kim DS, et al. High-performance calcium sensors for imaging activity in neuronal populations and microcompartments. Nature Methods. PMID 31209382 DOI: 10.1038/S41592-019-0435-6  0.443
2018 Dana H, Novak O, Guardado-Montesino M, Fransen JW, Hu A, Borghuis BG, Guo C, Kim DS, Svoboda K. Thy1 transgenic mice expressing the red fluorescent calcium indicator jRGECO1a for neuronal population imaging in vivo. Plos One. 13: e0205444. PMID 30308007 DOI: 10.1371/Journal.Pone.0205444  0.421
2018 Shen Y, Dana H, Abdelfattah AS, Patel R, Shea J, Molina RS, Rawal B, Rancic V, Chang YF, Wu L, Chen Y, Qian Y, Wiens MD, Hambleton N, Ballanyi K, ... ... Kim DS, et al. A genetically encoded Ca2+ indicator based on circularly permutated sea anemone red fluorescent protein eqFP578. Bmc Biology. 16: 9. PMID 29338710 DOI: 10.1186/S12915-018-0480-0  0.396
2017 Sun Y, Nern A, Franconville R, Dana H, Schreiter ER, Looger LL, Svoboda K, Kim DS, Hermundstad AM, Jayaraman V. Neural signatures of dynamic stimulus selection in Drosophila. Nature Neuroscience. PMID 28604683 DOI: 10.1038/Nn.4581  0.384
2016 Chu J, Oh Y, Sens A, Ataie N, Dana H, Macklin JJ, Laviv T, Welf ES, Dean KM, Zhang F, Kim BB, Tang CT, Hu M, Baird MA, Davidson MW, ... ... Kim DS, et al. A bright cyan-excitable orange fluorescent protein facilitates dual-emission microscopy and enhances bioluminescence imaging in vivo. Nature Biotechnology. PMID 27240196 DOI: 10.1038/Nbt.3550  0.536
2016 Dana H, Mohar B, Sun Y, Narayan S, Gordus A, Hasseman JP, Tsegaye G, Holt GT, Hu A, Walpita D, Patel R, Macklin JJ, Bargmann CI, Ahrens MB, Schreiter ER, ... ... Kim DS, et al. Sensitive red protein calcium indicators for imaging neural activity. Elife. 5. PMID 27011354 DOI: 10.7554/Elife.12727  0.459
2016 Dana H, Mohar B, Sun Y, Narayan S, Gordus A, Hasseman JP, Tsegaye G, Holt GT, Hu A, Walpita D, Patel R, Macklin JJ, Bargmann CI, Ahrens MB, Schreiter ER, ... ... Kim DS, et al. Author response: Sensitive red protein calcium indicators for imaging neural activity Elife. DOI: 10.7554/Elife.12727.035  0.358
2015 Henderson MJ, Baldwin HA, Werley CA, Boccardo S, Whitaker LR, Yan X, Holt GT, Schreiter ER, Looger LL, Cohen AE, Kim DS, Harvey BK. A Low Affinity GCaMP3 Variant (GCaMPer) for Imaging the Endoplasmic Reticulum Calcium Store. Plos One. 10: e0139273. PMID 26451944 DOI: 10.1371/Journal.Pone.0139273  0.38
2015 Tan Z, Sun W, Chen TW, Kim D, Ji N. Neuronal Representation of Ultraviolet Visual Stimuli in Mouse Primary Visual Cortex. Scientific Reports. 5: 12597. PMID 26219604 DOI: 10.1038/Srep12597  0.355
2015 Fosque BF, Sun Y, Dana H, Yang CT, Ohyama T, Tadross MR, Patel R, Zlatic M, Kim DS, Ahrens MB, Jayaraman V, Looger LL, Schreiter ER. Neural circuits. Labeling of active neural circuits in vivo with designed calcium integrators. Science (New York, N.Y.). 347: 755-60. PMID 25678659 DOI: 10.1126/Science.1260922  0.648
2014 Dana H, Chen TW, Hu A, Shields BC, Guo C, Looger LL, Kim DS, Svoboda K. Thy1-GCaMP6 transgenic mice for neuronal population imaging in vivo. Plos One. 9: e108697. PMID 25250714 DOI: 10.1371/Journal.Pone.0108697  0.393
2014 Wang C, Liu R, Milkie DE, Sun W, Tan Z, Kerlin A, Chen TW, Kim DS, Ji N. Multiplexed aberration measurement for deep tissue imaging in vivo. Nature Methods. 11: 1037-40. PMID 25128976 DOI: 10.1038/Nmeth.3068  0.343
2014 Thestrup T, Litzlbauer J, Bartholomäus I, Mues M, Russo L, Dana H, Kovalchuk Y, Liang Y, Kalamakis G, Laukat Y, Becker S, Witte G, Geiger A, Allen T, Rome LC, ... ... Kim DS, et al. Optimized ratiometric calcium sensors for functional in vivo imaging of neurons and T lymphocytes. Nature Methods. 11: 175-82. PMID 24390440 DOI: 10.1038/Nmeth.2773  0.413
2013 Wardill TJ, Chen TW, Schreiter ER, Hasseman JP, Tsegaye G, Fosque BF, Behnam R, Shields BC, Ramirez M, Kimmel BE, Kerr RA, Jayaraman V, Looger LL, Svoboda K, Kim DS. A neuron-based screening platform for optimizing genetically-encoded calcium indicators. Plos One. 8: e77728. PMID 24155972 DOI: 10.1371/Journal.Pone.0077728  0.647
2013 Chen TW, Wardill TJ, Sun Y, Pulver SR, Renninger SL, Baohan A, Schreiter ER, Kerr RA, Orger MB, Jayaraman V, Looger LL, Svoboda K, Kim DS. Ultrasensitive fluorescent proteins for imaging neuronal activity. Nature. 499: 295-300. PMID 23868258 DOI: 10.1038/Nature12354  0.464
2013 Akerboom J, Carreras Calderón N, Tian L, Wabnig S, Prigge M, Tolö J, Gordus A, Orger MB, Severi KE, Macklin JJ, Patel R, Pulver SR, Wardill TJ, Fischer E, Schüler C, ... ... Kim DS, et al. Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics. Frontiers in Molecular Neuroscience. 6: 2. PMID 23459413 DOI: 10.3389/Fnmol.2013.00002  0.445
2012 Akerboom J, Chen TW, Wardill TJ, Tian L, Marvin JS, Mutlu S, Calderón NC, Esposti F, Borghuis BG, Sun XR, Gordus A, Orger MB, Portugues R, Engert F, Macklin JJ, ... ... Kim DS, et al. Optimization of a GCaMP calcium indicator for neural activity imaging. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 32: 13819-40. PMID 23035093 DOI: 10.1523/Jneurosci.2601-12.2012  0.47
2011 Kautzmann MA, Kim DS, Felder-Schmittbuhl MP, Swaroop A. Combinatorial regulation of photoreceptor differentiation factor, neural retina leucine zipper gene NRL, revealed by in vivo promoter analysis. The Journal of Biological Chemistry. 286: 28247-55. PMID 21673114 DOI: 10.1074/Jbc.M111.257246  0.308
2010 Roger JE, Nellissery J, Kim DS, Swaroop A. Sumoylation of bZIP transcription factor NRL modulates target gene expression during photoreceptor differentiation. The Journal of Biological Chemistry. 285: 25637-44. PMID 20551322 DOI: 10.1074/Jbc.M110.142810  0.344
2008 Kim DS, Matsuda T, Cepko CL. A core paired-type and POU homeodomain-containing transcription factor program drives retinal bipolar cell gene expression. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 28: 7748-64. PMID 18667607 DOI: 10.1523/JNEUROSCI.0397-08.2008  0.474
2008 Lagali PS, Balya D, Awatramani GB, Münch TA, Kim DS, Busskamp V, Cepko CL, Roska B. Light-activated channels targeted to ON bipolar cells restore visual function in retinal degeneration. Nature Neuroscience. 11: 667-75. PMID 18432197 DOI: 10.1038/Nn.2117  0.678
2008 Kim DS, Ross SE, Trimarchi JM, Aach J, Greenberg ME, Cepko CL. Identification of molecular markers of bipolar cells in the murine retina. The Journal of Comparative Neurology. 507: 1795-810. PMID 18260140 DOI: 10.1002/Cne.21639  0.686
2008 Kim DS, Palmiter RD. Interaction of dopamine and adenosine receptor function in behavior: studies with dopamine-deficient mice. Frontiers in Bioscience : a Journal and Virtual Library. 13: 2311-8. PMID 17981713 DOI: 10.2741/2845  0.426
2006 Kim DS, Palmiter RD, Cummins A, Gerfen CR. Reversal of supersensitive striatal dopamine D1 receptor signaling and extracellular signal-regulated kinase activity in dopamine-deficient mice. Neuroscience. 137: 1381-8. PMID 16388913 DOI: 10.1016/j.neuroscience.2005.10.054  0.421
2004 Denenberg VH, Kim DS, Palmiter RD. The role of dopamine in learning, memory, and performance of a water escape task. Behavioural Brain Research. 148: 73-8. PMID 14684249 DOI: 10.1016/S0166-4328(03)00183-9  0.373
2003 Kim DS, Palmiter RD. Adenosine receptor blockade reverses hypophagia and enhances locomotor activity of dopamine-deficient mice. Proceedings of the National Academy of Sciences of the United States of America. 100: 1346-51. PMID 12538862 DOI: 10.1073/pnas.252753799  0.407
2002 Kim DS, Froelick GJ, Palmiter RD. Dopamine-dependent desensitization of dopaminergic signaling in the developing mouse striatum. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 22: 9841-9. PMID 12427840 DOI: 10.1523/Jneurosci.22-22-09841.2002  0.471
2000 Kim DS, Szczypka MS, Palmiter RD. Dopamine-deficient mice are hypersensitive to dopamine receptor agonists. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 20: 4405-13. PMID 10844009 DOI: 10.1523/Jneurosci.20-12-04405.2000  0.477
1999 Szczypka MS, Rainey MA, Kim DS, Alaynick WA, Marck BT, Matsumoto AM, Palmiter RD. Feeding behavior in dopamine-deficient mice. Proceedings of the National Academy of Sciences of the United States of America. 96: 12138-43. PMID 10518589 DOI: 10.1073/Pnas.96.21.12138  0.395
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