Jae-Yean Kim - Publications

Affiliations: 
Gyeongsang National University 

63 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Kim SH, Bahk S, An J, Hussain S, Nguyen NT, Do HL, Kim JY, Hong JC, Chung WS. A Gain-of-Function Mutant of IAA15 Inhibits Lateral Root Development by Transcriptional Repression of Genes in Arabidopsis. Frontiers in Plant Science. 11: 1239. PMID 32903377 DOI: 10.3389/Fpls.2020.01239  0.444
2020 Iswanto ABB, Shon JC, Vu MH, Kumar R, Liu KH, Kim JY. Sphingolipids Modulate Secretion of GPI-anchored Plasmodesmata Proteins and Callose Deposition. Plant Physiology. PMID 32636343 DOI: 10.1104/Pp.20.00401  0.374
2019 Baek D, Kim MC, Kumar D, Park B, Cheong MS, Choi W, Park HC, Chun HJ, Park HJ, Lee SY, Bressan RA, Kim JY, Yun DJ. AtPR5K2, a PR5-Like Receptor Kinase, Modulates Plant Responses to Drought Stress by Phosphorylating Protein Phosphatase 2Cs. Frontiers in Plant Science. 10: 1146. PMID 31708935 DOI: 10.3389/Fpls.2019.01146  0.425
2019 Kim J, Kim J. New era of precision plant breeding using genome editing Plant Biotechnology Reports. 13: 419-421. DOI: 10.1007/S11816-019-00581-W  0.319
2019 Shelake RM, Pramanik D, Kim J. Evolution of plant mutagenesis tools: a shifting paradigm from random to targeted genome editing Plant Biotechnology Reports. 13: 423-445. DOI: 10.1007/S11816-019-00562-Z  0.35
2018 Wu SW, Kumar R, Boedi Iswanto AB, Kim JY. Callose Balancing at Plasmodesmata. Journal of Experimental Botany. PMID 30165704 DOI: 10.1093/Jxb/Ery317  0.327
2018 Kim JY. Symplasmic Intercellular Communication through Plasmodesmata. Plants (Basel, Switzerland). 7. PMID 29558398 DOI: 10.3390/plants7010023  0.321
2017 Kim SH, Kim HS, Bahk S, An J, Yoo Y, Kim JY, Chung WS. Phosphorylation of the transcriptional repressor MYB15 by mitogen-activated protein kinase 6 is required for freezing tolerance in Arabidopsis. Nucleic Acids Research. PMID 28510716 DOI: 10.1093/Nar/Gkx417  0.402
2016 Kumar D, Kumar R, Baek D, Hyun TK, Chung WS, Yun DJ, Kim JY. An Arabidopsis thaliana RECEPTOR DEAD KINASE1 (RDK1) gene functions as a positive regulator in plant responses to ABA. Molecular Plant. PMID 27923613 DOI: 10.1016/J.Molp.2016.11.011  0.416
2016 Kumar R, Wu SW, Iswanto AB, Kumar D, Han X, Kim JY. A Strategy to Validate the Role of Callose-mediated Plasmodesmal Gating in the Tropic Response. Journal of Visualized Experiments : Jove. PMID 27166513 DOI: 10.3791/53513  0.387
2015 Feng M, Kim JY. Revisiting Apoplastic Auxin Signaling Mediated by AUXIN BINDING PROTEIN 1. Molecules and Cells. PMID 26467289 DOI: 10.14348/Molcells.2015.0205  0.433
2015 Han X, Kim JY. Integrating hormone- and micromolecule-mediated signaling with plasmodesmal communication. Molecular Plant. PMID 26384246 DOI: 10.1016/J.Molp.2015.08.015  0.403
2015 Cho WK, Hyun TK, Kumar D, Rim Y, Chen XY, Jo Y, Kim S, Lee KW, Park ZY, Lucas WJ, Kim JY. Proteomic Analysis to Identify Tightly-Bound Cell Wall Protein in Rice Calli. Molecules and Cells. 38: 685-96. PMID 26194822 DOI: 10.14348/Molcells.2015.0033  0.484
2015 Kumar D, Chen H, Rim Y, Kim JY. GAL4 transactivation-based assay for the detection of selective intercellular protein movement. Methods in Molecular Biology (Clifton, N.J.). 1217: 231-43. PMID 25287207 DOI: 10.1007/978-1-4939-1523-1_15  0.521
2015 Kumar R, Kumar D, Hyun TK, Kim J. Players at plasmodesmal nano-channels Journal of Plant Biology. 58: 75-86. DOI: 10.1007/S12374-014-0541-Z  0.397
2014 Hyun TK, Lee S, Kumar D, Rim Y, Kumar R, Lee SY, Lee CH, Kim JY. RNA-seq analysis of Rubus idaeus cv. Nova: transcriptome sequencing and de novo assembly for subsequent functional genomics approaches. Plant Cell Reports. 33: 1617-28. PMID 25023872 DOI: 10.1007/S00299-014-1641-4  0.318
2014 Uddin MN, Dunoyer P, Schott G, Akhter S, Shi C, Lucas WJ, Voinnet O, Kim JY. The protein kinase TOUSLED facilitates RNAi in Arabidopsis. Nucleic Acids Research. 42: 7971-80. PMID 24920830 DOI: 10.1093/Nar/Gku422  0.348
2014 Chen H, Jackson D, Kim JY. Identification of evolutionarily conserved amino acid residues in homeodomain of KNOX proteins for intercellular trafficking. Plant Signaling & Behavior. 9: e28355. PMID 24603432 DOI: 10.4161/Psb.28355  0.565
2014 Hyun TK, Lee S, Rim Y, Kumar R, Han X, Lee SY, Lee CH, Kim JY. De-novo RNA sequencing and metabolite profiling to identify genes involved in anthocyanin biosynthesis in Korean black raspberry (Rubus coreanus Miquel). Plos One. 9: e88292. PMID 24505466 DOI: 10.1371/Journal.Pone.0088292  0.373
2014 Han X, Hyun TK, Zhang M, Kumar R, Koh EJ, Kang BH, Lucas WJ, Kim JY. Auxin-callose-mediated plasmodesmal gating is essential for tropic auxin gradient formation and signaling. Developmental Cell. 28: 132-46. PMID 24480642 DOI: 10.1016/J.Devcel.2013.12.008  0.386
2014 Han X, Kumar D, Chen H, Wu S, Kim JY. Transcription factor-mediated cell-to-cell signalling in plants. Journal of Experimental Botany. 65: 1737-49. PMID 24347464 DOI: 10.1093/Jxb/Ert422  0.424
2013 Nazim Uddin M, Kim JY. Intercellular and systemic spread of RNA and RNAi in plants. Wiley Interdisciplinary Reviews. Rna. 4: 279-93. PMID 23536229 DOI: 10.1002/Wrna.1160  0.412
2013 Chen H, Ahmad M, Rim Y, Lucas WJ, Kim JY. Evolutionary and molecular analysis of Dof transcription factors identified a conserved motif for intercellular protein trafficking. The New Phytologist. 198: 1250-60. PMID 23506539 DOI: 10.1111/Nph.12223  0.501
2013 Fanata WI, Lee KH, Son BH, Yoo JY, Harmoko R, Ko KS, Ramasamy NK, Kim KH, Oh DB, Jung HS, Kim JY, Lee SY, Lee KO. N-glycan maturation is crucial for cytokinin-mediated development and cellulose synthesis in Oryza sativa. The Plant Journal : For Cell and Molecular Biology. 73: 966-79. PMID 23199012 DOI: 10.1111/Tpj.12087  0.377
2013 Shah AA, Wang C, Chung YR, Kim JY, Choi ES, Kim SW. Enhancement of geraniol resistance of Escherichia coli by MarA overexpression. Journal of Bioscience and Bioengineering. 115: 253-8. PMID 23168261 DOI: 10.1016/J.Jbiosc.2012.10.009  0.304
2012 Han X, Chen C, Hyun TK, Kumar R, Kim JY. Metabolic module mining based on Independent Component Analysis in Arabidopsis thaliana. Molecules and Cells. 34: 295-304. PMID 22960738 DOI: 10.1007/S10059-012-0117-Z  0.367
2012 Hyun TK, Rim Y, Jang HJ, Kim CH, Park J, Kumar R, Lee S, Kim BC, Bhak J, Nguyen-Quoc B, Kim SW, Lee SY, Kim JY. De novo transcriptome sequencing of Momordica cochinchinensis to identify genes involved in the carotenoid biosynthesis. Plant Molecular Biology. 79: 413-27. PMID 22580955 DOI: 10.1007/S11103-012-9919-9  0.365
2012 Das A, Lee S, Hyun TK, Kim S, Kim J. Plant volatiles as method of communication Plant Biotechnology Reports. 7: 9-26. DOI: 10.1007/S11816-012-0236-1  0.369
2011 Rim Y, Huang L, Chu H, Han X, Cho WK, Jeon CO, Kim HJ, Hong JC, Lucas WJ, Kim JY. Analysis of Arabidopsis transcription factor families revealed extensive capacity for cell-to-cell movement as well as discrete trafficking patterns. Molecules and Cells. 32: 519-26. PMID 22080370 DOI: 10.1007/S10059-011-0135-2  0.459
2011 Wang C, Yoon SH, Jang HJ, Chung YR, Kim JY, Choi ES, Kim SW. Metabolic engineering of Escherichia coli for α-farnesene production. Metabolic Engineering. 13: 648-55. PMID 21907299 DOI: 10.1016/J.Ymben.2011.08.001  0.318
2011 Xu XM, Wang J, Xuan Z, Goldshmidt A, Borrill PG, Hariharan N, Kim JY, Jackson D. Chaperonins facilitate KNOTTED1 cell-to-cell trafficking and stem cell function. Science (New York, N.Y.). 333: 1141-4. PMID 21868675 DOI: 10.1126/Science.1205727  0.516
2011 Jang HJ, Yoon SH, Ryu HK, Kim JH, Wang CL, Kim JY, Oh DK, Kim SW. Retinoid production using metabolically engineered Escherichia coli with a two-phase culture system. Microbial Cell Factories. 10: 59. PMID 21801353 DOI: 10.1186/1475-2859-10-59  0.305
2011 Ahmad M, Cho WK, Rim Y, Huang L, Kim JY. How to assess the intercellular trafficking of transcription factors. Methods in Molecular Biology (Clifton, N.J.). 754: 235-45. PMID 21720956 DOI: 10.1007/978-1-61779-154-3_13  0.471
2011 Kim JH, Jung IJ, Kim DY, Fanata WI, Son BH, Yoo JY, Harmoko R, Ko KS, Moon JC, Jang HH, Kim WY, Kim JY, Lim CO, Lee SY, Lee KO. Proteomic identification of an embryo-specific 1Cys-Prx promoter and analysis of its activity in transgenic rice. Biochemical and Biophysical Research Communications. 408: 78-83. PMID 21458419 DOI: 10.1016/J.Bbrc.2011.03.120  0.408
2011 Jo Y, Cho WK, Rim Y, Moon J, Chen XY, Chu H, Kim CY, Park ZY, Lucas WJ, Kim JY. Plasmodesmal receptor-like kinases identified through analysis of rice cell wall extracted proteins. Protoplasma. 248: 191-203. PMID 21161304 DOI: 10.1007/S00709-010-0251-4  0.45
2011 Hyun TK, Uddin MN, Rim Y, Kim JY. Cell-to-cell trafficking of RNA and RNA silencing through plasmodesmata. Protoplasma. 248: 101-16. PMID 21042816 DOI: 10.1007/S00709-010-0225-6  0.384
2010 Cho WK, Chen XY, Rim Y, Chu H, Kim S, Kim SW, Park ZY, Kim JY. Proteome study of the phloem sap of pumpkin using multidimensional protein identification technology. Journal of Plant Physiology. 167: 771-8. PMID 20138393 DOI: 10.1016/J.Jplph.2010.01.004  0.426
2010 Cho WK, Chen XY, Rim Y, Chu H, Jo Y, Kim S, Park ZY, Kim JY. Extended latex proteome analysis deciphers additional roles of the lettuce laticifer Plant Biotechnology Reports. 4: 311-319. DOI: 10.1007/S11816-010-0149-9  0.443
2009 Rim Y, Jung JH, Chu H, Cho WK, Kim SW, Hong JC, Jackson D, Datla R, Kim JY. A non-cell-autonomous mechanism for the control of plant architecture and epidermal differentiation involves intercellular trafficking of BREVIPEDICELLUS protein. Functional Plant Biology : Fpb. 36: 280-289. PMID 32688646 DOI: 10.1071/Fp08243  0.596
2009 Huang S, Li R, Zhang Z, Li L, Gu X, Fan W, Lucas WJ, Wang X, Xie B, Ni P, Ren Y, Zhu H, Li J, Lin K, Jin W, ... ... Kim JY, et al. The genome of the cucumber, Cucumis sativus L. Nature Genetics. 41: 1275-81. PMID 19881527 DOI: 10.1038/Ng.475  0.307
2009 Cho WK, Kim JY. Integrated analyses of the rice secretome. Plant Signaling & Behavior. 4: 345-7. PMID 19794859 DOI: 10.4161/Psb.4.4.8198  0.468
2009 Lucas WJ, Ham BK, Kim JY. Plasmodesmata - bridging the gap between neighboring plant cells. Trends in Cell Biology. 19: 495-503. PMID 19748270 DOI: 10.1016/J.Tcb.2009.07.003  0.461
2009 Cho WK, Chen XY, Uddin NM, Rim Y, Moon J, Jung JH, Shi C, Chu H, Kim S, Kim SW, Park ZY, Kim JY. Comprehensive proteome analysis of lettuce latex using multidimensional protein-identification technology. Phytochemistry. 70: 570-8. PMID 19356777 DOI: 10.1016/J.Phytochem.2009.03.004  0.441
2009 Chen XY, Liu L, Lee E, Han X, Rim Y, Chu H, Kim SW, Sack F, Kim JY. The Arabidopsis callose synthase gene GSL8 is required for cytokinesis and cell patterning. Plant Physiology. 150: 105-13. PMID 19286936 DOI: 10.1104/Pp.108.133918  0.413
2009 Cho WK, Chen XY, Chu H, Rim Y, Kim S, Kim ST, Kim SW, Park ZY, Kim JY. Proteomic analysis of the secretome of rice calli. Physiologia Plantarum. 135: 331-41. PMID 19226311 DOI: 10.1111/J.1399-3054.2008.01198.X  0.468
2009 Chen XY, Kim ST, Cho WK, Rim Y, Kim S, Kim SW, Kang KY, Park ZY, Kim JY. Proteomics of weakly bound cell wall proteins in rice calli. Journal of Plant Physiology. 166: 675-85. PMID 19038476 DOI: 10.1016/J.Jplph.2008.09.010  0.439
2009 Huang L, Chen XY, Rim Y, Han X, Cho WK, Kim SW, Kim JY. Arabidopsis glucan synthase-like 10 functions in male gametogenesis. Journal of Plant Physiology. 166: 344-52. PMID 18760496 DOI: 10.1016/J.Jplph.2008.06.010  0.321
2009 Rim Y, Jung JH, Chu H, Cho WK, Kim SW, Hong JC, Jackson D, Datla R, Kim JY. A non-cell-autonomous mechanism for the control of plant architecture and epidermal differentiation involves intercellular trafficking of BREVIPEDICELLUS protein Functional Plant Biology. 36: 280-289. DOI: 10.1071/FP08243  0.418
2008 Chi YH, Moon JC, Park JH, Kim HS, Zulfugarov IS, Fanata WI, Jang HH, Lee JR, Lee YM, Kim ST, Chung YY, Lim CO, Kim JY, Yun DJ, Lee CH, et al. Abnormal chloroplast development and growth inhibition in rice thioredoxin m knock-down plants. Plant Physiology. 148: 808-17. PMID 18723667 DOI: 10.1104/Pp.108.123547  0.471
2008 Kim ST, Kim SG, Kang YH, Wang Y, Kim JY, Yi N, Kim JK, Rakwal R, Koh HJ, Kang KY. Proteomics analysis of rice lesion mimic mutant (spl1) reveals tightly localized probenazole-induced protein (PBZ1) in cells undergoing programmed cell death. Journal of Proteome Research. 7: 1750-60. PMID 18338860 DOI: 10.1021/Pr700878T  0.45
2008 Kim ST, Yu S, Kang YH, Kim SG, Kim JY, Kim SH, Kang KY. The rice pathogen-related protein 10 (JIOsPR10) is induced by abiotic and biotic stresses and exhibits ribonuclease activity. Plant Cell Reports. 27: 593-603. PMID 18074138 DOI: 10.1007/S00299-007-0485-6  0.414
2007 Das A, Yoon SH, Lee SH, Kim JY, Oh DK, Kim SW. An update on microbial carotenoid production: application of recent metabolic engineering tools. Applied Microbiology and Biotechnology. 77: 505-12. PMID 17912511 DOI: 10.1007/S00253-007-1206-3  0.302
2007 Lee JR, Jung JH, Kang JS, Kim JC, Jung IJ, Seok MS, Kim JH, Kim WY, Kim MG, Kim JY, Lim CO, Lee KO, Lee SY. Molecular and functional characterization of monocot-specific Pex5p splicing variants, using OsPex5pL and OsPex5pS from rice (Oryza sativa). Molecules and Cells. 23: 161-9. PMID 17464192  0.303
2007 Moon J, Jung J, Rim Y, Datla R, Joliot A, Jackson D, Kim J. Regulation of Intercellular Protein and RNA Movement Journal of Plant Biotechnology. 34: 129-137. DOI: 10.5010/Jpb.2007.34.2.129  0.589
2007 Kim CY, Liu L, Kim J. Signaling network for stem cell maintenance and functioning inarabidopsis shoot apical meristem Journal of Plant Biology. 50: 274-281. DOI: 10.1007/Bf03030655  0.377
2006 Lee JR, Jang HH, Park JH, Jung JH, Lee SS, Park SK, Chi YH, Moon JC, Lee YM, Kim SY, Kim JY, Yun DJ, Cho MJ, Lee KO, Lee SY. Cloning of two splice variants of the rice PTS1 receptor, OsPex5pL and OsPex5pS, and their functional characterization using pex5-deficient yeast and Arabidopsis. The Plant Journal : For Cell and Molecular Biology. 47: 457-66. PMID 16792693 DOI: 10.1111/J.1365-313X.2006.02797.X  0.394
2006 Yoon SH, Lee YM, Kim JE, Lee SH, Lee JH, Kim JY, Jung KH, Shin YC, Keasling JD, Kim SW. Enhanced lycopene production in Escherichia coli engineered to synthesize isopentenyl diphosphate and dimethylallyl diphosphate from mevalonate. Biotechnology and Bioengineering. 94: 1025-32. PMID 16547999 DOI: 10.1002/Bit.20912  0.324
2005 Kim JY, Rim Y, Wang J, Jackson D. A novel cell-to-cell trafficking assay indicates that the KNOX homeodomain is necessary and sufficient for intercellular protein and mRNA trafficking Genes and Development. 19: 788-793. PMID 15805469 DOI: 10.1101/Gad.332805  0.603
2005 Kim JY. Regulation of short-distance transport of RNA and protein Current Opinion in Plant Biology. 8: 45-52. PMID 15653399 DOI: 10.1016/j.pbi.2004.11.005  0.371
2005 Kim SW, Moon JY, Jung JH, Chen X, Shi C, Rim YG, Kwon HJ, Jackson D, Datla R, Joliot A, Kim JY. Intercellular trafficking of homeodomain proteins Plant Pathology Journal. 21: 21-26. DOI: 10.5423/Ppj.2005.21.1.021  0.624
2003 Kim JY, Yuan Z, Jackson D. Developmental regulation and significance of KNOX protein trafficking in Arabidopsis. Development (Cambridge, England). 130: 4351-62. PMID 12900451 DOI: 10.1242/Dev.00618  0.591
2003 Jackson D, Kim JY. Dispatch. Intercellular signaling: an elusive player steps forth. Current Biology : Cb. 13: R349-50. PMID 12725748 DOI: 10.1016/S0960-9822(03)00272-0  0.61
2002 Kim JY, Yuan Z, Cilia M, Khalfan-Jagani Z, Jackson D. Intercellular trafficking of a KNOTTED1 green fluorescent protein fusion in the leaf and shoot meristem of Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 99: 4103-8. PMID 11891300 DOI: 10.1073/Pnas.052484099  0.701
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