| Year |
Citation |
Score |
| 2024 |
Olvera N, Sánchez-Valle J, Núñez-Carpintero I, Rojas-Quintero J, Noell G, Casas-Recasens S, Faiz A, Hansbro P, Guirao A, Lepore R, Cirillo D, Agustí A, Polverino F, Valencia A, Faner R. Lung Tissue Multi-Layer Network Analysis Uncovers the Molecular Heterogeneity of COPD. American Journal of Respiratory and Critical Care Medicine. PMID 38626356 DOI: 10.1164/rccm.202303-0500OC |
0.332 |
|
| 2024 |
Núñez-Carpintero I, Rigau M, Bosio M, O'Connor E, Spendiff S, Azuma Y, Topf A, Thompson R, 't Hoen PAC, Chamova T, Tournev I, Guergueltcheva V, Laurie S, Beltran S, Capella-Gutiérrez S, ... Cirillo D, et al. Rare disease research workflow using multilayer networks elucidates the molecular determinants of severity in Congenital Myasthenic Syndromes. Nature Communications. 15: 1227. PMID 38418480 DOI: 10.1038/s41467-024-45099-0 |
0.412 |
|
| 2023 |
Armaos A, Serra F, Núñez-Carpintero I, Seo JH, Baca SC, Gustincich S, Valencia A, Freedman ML, Cirillo D, Giambartolomei C, Tartaglia GG. The PENGUIN approach to reconstruct protein interactions at enhancer-promoter regions and its application to prostate cancer. Nature Communications. 14: 8084. PMID 38057321 DOI: 10.1038/s41467-023-43767-1 |
0.565 |
|
| 2022 |
Harms RL, Ferrari A, Meier IB, Martinkova J, Santus E, Marino N, Cirillo D, Mellino S, Catuara Solarz S, Tarnanas I, Szoeke C, Hort J, Valencia A, Ferretti MT, Seixas A, et al. Digital biomarkers and sex impacts in Alzheimer's disease management - potential utility for innovative 3P medicine approach. The Epma Journal. 13: 299-313. PMID 35719134 DOI: 10.1007/s13167-022-00284-3 |
0.398 |
|
| 2021 |
Ponce-de-Leon M, Del Valle J, Fernandez JM, Bernardo M, Cirillo D, Sanchez-Valle J, Smith M, Capella-Gutierrez S, Gullón T, Valencia A. COVID-19 Flow-Maps an open geographic information system on COVID-19 and human mobility for Spain. Scientific Data. 8: 310. PMID 34848723 DOI: 10.1038/s41597-021-01093-5 |
0.373 |
|
| 2021 |
Núñez-Carpintero I, Petrizzelli M, Zinovyev A, Cirillo D, Valencia A. The multilayer community structure of medulloblastoma. Iscience. 24: 102365. PMID 33889829 DOI: 10.1016/j.isci.2021.102365 |
0.416 |
|
| 2021 |
Santus E, Marino N, Cirillo D, Chersoni E, Montagud A, Santuccione Chada A, Valencia A, Hughes K, Lindvall C. AI-aided Precision Medicine against COVID-19: Strategic Areas of Research and Development. Journal of Medical Internet Research. PMID 33560998 DOI: 10.2196/22453 |
0.546 |
|
| 2021 |
Cirillo D, Núñez-Carpintero I, Valencia A. Artificial Intelligence in Cancer Research: learning at different levels of data granularity. Molecular Oncology. PMID 33533192 DOI: 10.1002/1878-0261.12920 |
0.414 |
|
| 2021 |
Delso G, Cirillo D, Kaggie JD, Valencia A, Metser U, Veit-Haibach P. How to Design AI-Driven Clinical Trials in Nuclear Medicine. Seminars in Nuclear Medicine. 51: 112-119. PMID 33509367 DOI: 10.1053/j.semnuclmed.2020.09.003 |
0.37 |
|
| 2021 |
Ferrari A, Santus E, Cirillo D, Ponce-de-Leon M, Marino N, Ferretti MT, Santuccione Chadha A, Mavridis N, Valencia A. Simulating SARS-CoV-2 epidemics by region-specific variables and modeling contact tracing app containment. Npj Digital Medicine. 4: 9. PMID 33446891 DOI: 10.1038/s41746-020-00374-4 |
0.364 |
|
| 2020 |
Cirillo D, Catuara-Solarz S, Morey C, Guney E, Subirats L, Mellino S, Gigante A, Valencia A, Rementeria MJ, Chadha AS, Mavridis N. Sex and gender differences and biases in artificial intelligence for biomedicine and healthcare. Npj Digital Medicine. 3: 81. PMID 32529043 DOI: 10.1038/s41746-020-0288-5 |
0.437 |
|
| 2019 |
Cirillo D, Valencia A. Big data analytics for personalized medicine. Current Opinion in Biotechnology. 58: 161-167. PMID 30965188 DOI: 10.1016/J.Copbio.2019.03.004 |
0.485 |
|
| 2017 |
Armaos A, Cirillo D, Gaetano Tartaglia G. omiXcore: a web server for prediction of protein interactions with large RNA. Bioinformatics (Oxford, England). 33: 3104-3106. PMID 28637296 DOI: 10.1093/Bioinformatics/Btx361 |
0.313 |
|
| 2016 |
Cirillo D, Blanco M, Armaos A, Buness A, Avner P, Guttman M, Cerase A, Tartaglia GG. Quantitative predictions of protein interactions with long noncoding RNAs. Nature Methods. 14: 5-6. PMID 28032625 DOI: 10.1038/Nmeth.4100 |
0.338 |
|
| 2015 |
Cirillo D, Botta-Orfila T, Tartaglia GG. By the company they keep: interaction networks define the binding ability of transcription factors. Nucleic Acids Research. PMID 26089389 DOI: 10.1093/Nar/Gkv607 |
0.352 |
|
| 2014 |
Cirillo D, Livi CM, Agostini F, Tartaglia GG. Discovery of protein-RNA networks. Molecular Biosystems. 10: 1632-42. PMID 24756571 DOI: 10.1039/C4Mb00099D |
0.344 |
|
| 2013 |
Zanzoni A, Marchese D, Agostini F, Bolognesi B, Cirillo D, Botta-Orfila M, Livi CM, Rodriguez-Mulero S, Tartaglia GG. Principles of self-organization in biological pathways: a hypothesis on the autogenous association of alpha-synuclein. Nucleic Acids Research. 41: 9987-98. PMID 24003031 DOI: 10.1093/Nar/Gkt794 |
0.345 |
|
| 2013 |
Agostini F, Zanzoni A, Klus P, Marchese D, Cirillo D, Tartaglia GG. catRAPID omics: a web server for large-scale prediction of protein-RNA interactions. Bioinformatics (Oxford, England). 29: 2928-30. PMID 23975767 DOI: 10.1093/Bioinformatics/Btt495 |
0.325 |
|
| 2013 |
Cirillo D, Agostini F, Klus P, Marchese D, Rodriguez S, Bolognesi B, Tartaglia GG. Neurodegenerative diseases: quantitative predictions of protein-RNA interactions. Rna (New York, N.Y.). 19: 129-40. PMID 23264567 DOI: 10.1261/Rna.034777.112 |
0.346 |
|
| 2013 |
Agostini F, Cirillo D, Bolognesi B, Tartaglia GG. X-inactivation: quantitative predictions of protein interactions in the Xist network. Nucleic Acids Research. 41: e31. PMID 23093590 DOI: 10.1093/Nar/Gks968 |
0.312 |
|
| 2012 |
Cirillo D, Agostini F, Tartaglia GG. Predictions of protein-RNA interactions Wiley Interdisciplinary Reviews: Computational Molecular Science. 3: 161-175. DOI: 10.1002/Wcms.1119 |
0.375 |
|
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