| Year |
Citation |
Score |
| 2022 |
Xie L, Dong P, Qi Y, Hsieh TS, English BP, Jung S, Chen X, De Marzio M, Casellas R, Chang HY, Zhang B, Tjian R, Liu Z. BRD2 compartmentalizes the accessible genome. Nature Genetics. 54: 481-491. PMID 35410381 DOI: 10.1038/s41588-022-01044-9 |
0.447 |
|
| 2022 |
Meijer M, Agirre E, Kabbe M, van Tuijn CA, Heskol A, Zheng C, Mendanha Falcão A, Bartosovic M, Kirby L, Calini D, Johnson MR, Corces MR, Montine TJ, Chen X, Chang HY, et al. Epigenomic priming of immune genes implicates oligodendroglia in multiple sclerosis susceptibility. Neuron. PMID 35093191 DOI: 10.1016/j.neuron.2021.12.034 |
0.394 |
|
| 2020 |
Xie L, Dong P, Chen X, Hsieh TS, Banala S, De Marzio M, English BP, Qi Y, Jung SK, Kieffer-Kwon KR, Legant WR, Hansen AS, Schulmann A, Casellas R, Zhang B, et al. 3D ATAC-PALM: super-resolution imaging of the accessible genome. Nature Methods. PMID 32203384 DOI: 10.1038/S41592-020-0775-2 |
0.514 |
|
| 2019 |
Wu S, Turner KM, Nguyen N, Raviram R, Erb M, Santini J, Luebeck J, Rajkumar U, Diao Y, Li B, Zhang W, Jameson N, Corces MR, Granja JM, Chen X, et al. Circular ecDNA promotes accessible chromatin and high oncogene expression. Nature. PMID 31748743 DOI: 10.1038/S41586-019-1763-5 |
0.509 |
|
| 2019 |
Lee J, Termglinchan V, Diecke S, Itzhaki I, Lam CK, Garg P, Lau E, Greenhaw M, Seeger T, Wu H, Zhang JZ, Chen X, Gil IP, Ameen M, Sallam K, et al. Activation of PDGF pathway links LMNA mutation to dilated cardiomyopathy. Nature. PMID 31316208 DOI: 10.1038/S41586-019-1406-X |
0.393 |
|
| 2018 |
Chen X, Litzenburger UM, Wei Y, Schep AN, LaGory EL, Choudhry H, Giaccia AJ, Greenleaf WJ, Chang HY. Joint single-cell DNA accessibility and protein epitope profiling reveals environmental regulation of epigenomic heterogeneity. Nature Communications. 9: 4590. PMID 30389926 DOI: 10.1038/S41467-018-07115-Y |
0.468 |
|
| 2018 |
Lee MY, Chen X, Gustavsson A, Chang HY, Moerner W. In Situ Imaging of Spatial Organization of Accessible Chromatin at the Nanoscale with ATAC-see and Single-Molecule Super-Resolution Fluorescence Microscopy Biophysical Journal. 114: 539a. DOI: 10.1016/J.Bpj.2017.11.2944 |
0.434 |
|
| 2017 |
Chen YG, Kim MV, Chen X, Batista PJ, Aoyama S, Wilusz JE, Iwasaki A, Chang HY. Sensing Self and Foreign Circular RNAs by Intron Identity. Molecular Cell. PMID 28625551 DOI: 10.1016/J.Molcel.2017.05.022 |
0.517 |
|
| 2016 |
Chen X, Shen Y, Draper W, Buenrostro JD, Litzenburger U, Cho SW, Satpathy AT, Carter AC, Ghosh RP, East-Seletsky A, Doudna JA, Greenleaf WJ, Liphardt JT, Chang HY. ATAC-see reveals the accessible genome by transposase-mediated imaging and sequencing. Nature Methods. PMID 27749837 DOI: 10.1038/Nmeth.4031 |
0.516 |
|
| 2015 |
Zhao H, Sifakis EG, Sumida N, Millán-Ariño L, Scholz BA, Svensson JP, Chen X, Ronnegren AL, Mallet de Lima CD, Varnoosfaderani FS, Shi C, Loseva O, Yammine S, Israelsson M, Rathje LS, et al. PARP1- and CTCF-Mediated Interactions between Active and Repressed Chromatin at the Lamina Promote Oscillating Transcription. Molecular Cell. PMID 26321255 DOI: 10.1016/J.Molcel.2015.07.019 |
0.347 |
|
| 2014 |
Chen X, Yammine S, Shi C, Tark-Dame M, Göndör A, Ohlsson R. The visualization of large organized chromatin domains enriched in the H3K9me2 mark within a single chromosome in a single cell. Epigenetics. 9: 1439-45. PMID 25482057 DOI: 10.4161/15592294.2014.971633 |
0.358 |
|
| 2014 |
Chen X, Shi C, Yammine S, Göndör A, Rönnlund D, Fernandez-Woodbridge A, Sumida N, Widengren J, Ohlsson R. Chromatin in situ proximity (ChrISP): single-cell analysis of chromatin proximities at a high resolution. Biotechniques. 56: 117-8, 120-4. PMID 24641475 DOI: 10.2144/000114145 |
0.368 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2020 |
Zhang J, Yue W, Zhou Y, Liao M, Chen X, Hua J. Super enhancers-Functional cores under the 3D genome. Cell Proliferation. e12970. PMID 33336467 DOI: 10.1111/cpr.12970 |
0.297 |
|
| 2022 |
Yadav RP, Polavarapu VK, Xing P, Chen X. FFPE-ATAC: A Highly Sensitive Method for Profiling Chromatin Accessibility in Formalin-Fixed Paraffin-Embedded Samples. Current Protocols. 2: e535. PMID 35994571 DOI: 10.1002/cpz1.535 |
0.278 |
|
| 2023 |
Dang Y, Yadav RP, Chen X. ATAC-See: A Tn5 Transposase-Mediated Assay for Detection of Chromatin Accessibility with Imaging. Methods in Molecular Biology (Clifton, N.J.). 2611: 285-291. PMID 36807074 DOI: 10.1007/978-1-0716-2899-7_15 |
0.25 |
|
| 2021 |
Polavarapu VK, Xing P, Zhang H, Zhao M, Mathot L, Zhao L, Rosen G, Swartling FJ, Sjöblom T, Chen X. Profiling chromatin accessibility in formalin-fixed paraffin-embedded samples. Genome Research. PMID 34261731 DOI: 10.1101/gr.275269.121 |
0.242 |
|
| 2021 |
Lu X, Maturi NP, Jarvius M, Zhao L, Xie Y, Tan E, Xing P, Fryknäs M, Uhrbom L, Chen X. ECOA-7. Conserved cell-lineage controlled chromatin accessibility in human and mouse glioblastoma stem cells predicts functionally distinct subgroups Neuro-Oncology Advances. 3: ii2-ii2. DOI: 10.1093/NOAJNL/VDAB070.007 |
0.238 |
|
| 2021 |
Zhu Z, Wu X, Li Q, Zhang J, Yu S, Shen Q, Zhou Z, Pan Q, Yue W, Qin D, Zhang Y, Zhao W, Zhang R, Peng S, Li N, ... ... Chen X, et al. Histone demethylase complexes KDM3A and KDM3B cooperate with OCT4/SOX2 to define a pluripotency gene regulatory network. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 35: e21664. PMID 34042215 DOI: 10.1096/fj.202100230R |
0.236 |
|
| 2024 |
Du Q, Zhu L, Zhong J, Wei X, Zhang Q, Shi T, Han C, Yin X, Chen X, Tong D, Huang Y. Porcine circovirus type 2 infection promotes the SUMOylation of nucleophosmin-1 to facilitate the viral circular single-stranded DNA replication. Plos Pathogens. 20: e1012014. PMID 38394330 DOI: 10.1371/journal.ppat.1012014 |
0.235 |
|
| 2022 |
Zhang J, Zhou Y, Yue W, Zhu Z, Wu X, Yu S, Shen Q, Pan Q, Xu W, Zhang R, Wu X, Li X, Li Y, Li Y, Wang Y, ... ... Chen X, et al. Super-enhancers conserved within placental mammals maintain stem cell pluripotency. Proceedings of the National Academy of Sciences of the United States of America. 119: e2204716119. PMID 36161929 DOI: 10.1073/pnas.2204716119 |
0.235 |
|
| 2023 |
Li H, Zhang H, Wenz A, Kang Z, Wang H, Vlodavsky I, Chen X, Li J. Heparanase Modulates Chromatin Accessibility. Cells. 12. PMID 36980232 DOI: 10.3390/cells12060891 |
0.231 |
|
| 2021 |
Cavalli M, Diamanti K, Dang Y, Xing P, Pan G, Chen X, Wadelius C. The Thioesterase as a Regulator of Lipid Metabolism in Type 2 Diabetes Detected in a Multi-Omics Study of Human Liver. Omics : a Journal of Integrative Biology. PMID 34520261 DOI: 10.1089/omi.2021.0093 |
0.215 |
|
| 2023 |
Lu X, Zhong L, Lindell E, Veanes M, Guo J, Zhao M, Salehi M, Swartling FJ, Chen X, Sjöblom T, Zhang X. Identification of ATF3 as a novel protective signature of quiescent colorectal tumor cells. Cell Death & Disease. 14: 676. PMID 37833290 DOI: 10.1038/s41419-023-06204-1 |
0.208 |
|
| 2022 |
Zhao L, Polavarapu VK, Yadav RP, Xing P, Chen X. A Highly Sensitive Method to Efficiently Profile the Histone Modifications of FFPE Samples. Bio-Protocol. 12. PMID 35865114 DOI: 10.21769/BioProtoc.4418 |
0.205 |
|
| 2022 |
Qi X, Chen X, Zhao Y, Chen J, Niu B, Shen B. Prognostic Roles of ceRNA Network-Based Signatures in Gastrointestinal Cancers. Frontiers in Oncology. 12: 921194. PMID 35924172 DOI: 10.3389/fonc.2022.921194 |
0.201 |
|
| 2021 |
Zhao L, Xing P, Polavarapu VK, Zhao M, Valero-Martínez B, Dang Y, Maturi N, Mathot L, Neves I, Yildirim I, Swartling FJ, Sjöblom T, Uhrbom L, Chen X. FACT-seq: profiling histone modifications in formalin-fixed paraffin-embedded samples with low cell numbers. Nucleic Acids Research. PMID 34534335 DOI: 10.1093/nar/gkab813 |
0.2 |
|
| 2022 |
Borgenvik A, Holmberg KO, Bolin S, Zhao M, Savov V, Rosén G, Hutter S, Garancher A, Suryo Rahmanto A, Bergström T, Olsen TK, Mainwaring OJ, Sattanino D, Verbaan AD, Rusert JM, ... ... Chen X, et al. Dormant SOX9-positive cells facilitate MYC-driven recurrence of medulloblastoma. Cancer Research. PMID 36219398 DOI: 10.1158/0008-5472.CAN-22-2108 |
0.199 |
|
| 2021 |
Borgenvik A, Bolin S, Savov V, Holmberg KO, Zhao M, Rosén G, Hutter S, Garancher A, Rahmanto AS, Bergström T, Mainwaring O, Sattanino D, Verbaan AD, Rusert J, Sundström A, ... ... Chen x, et al. TMOD-25. LATENT SOX9-POSITIVE CELLS BEHIND MYC-DRIVEN MEDULLOBLASTOMA RELAPSE Neuro-Oncology. 23: vi220-vi221. DOI: 10.1093/neuonc/noab196.886 |
0.195 |
|
| 2022 |
Lu X, Maturi NP, Jarvius M, Yildirim I, Dang Y, Zhao L, Xie Y, Tan EJ, Xing P, Larsson R, Fryknäs M, Uhrbom L, Chen X. Cell-lineage controlled epigenetic regulation in glioblastoma stem cells determines functionally distinct subgroups and predicts patient survival. Nature Communications. 13: 2236. PMID 35469026 DOI: 10.1038/s41467-022-29912-2 |
0.162 |
|
| 2023 |
Luo Q, Pui HP, Chen J, Yu L, Jannig PR, Pei Y, Zhao L, Chen X, Petropoulos S, Ruas JL, Wu J, Deng Q. Epiblast-like stem cells established by Wnt/β-catenin signaling manifest distinct features of formative pluripotency and germline competence. Cell Reports. 42: 112021. PMID 36848234 DOI: 10.1016/j.celrep.2023.112021 |
0.16 |
|
| 2008 |
Chen X, Sun D, Liu F, Jia S, Zhang Y. [Construction of universal vector for gene targeting and analysis of its function]. Sheng Wu Gong Cheng Xue Bao = Chinese Journal of Biotechnology. 24: 1818-23. PMID 19149198 |
0.145 |
|
| 2020 |
Bolin S, Savov V, Borgenvik A, Rosén G, Olausson KH, Zhao M, Garancher A, Rahmanto AS, Hutter S, Mainwaring O, Rusert J, Sundstrom A, Richardson S, Fotaki G, Hill RM, ... ... Chen X, et al. MBRS-10. QUIESCENT SOX9-POSITIVE CELLS BEHIND MYC DRIVEN MEDULLOBLASTOMA RECURRENCE Neuro-Oncology. 22: iii400-iii400. DOI: 10.1093/neuonc/noaa222.528 |
0.135 |
|
| 2024 |
Künstner A, Schwarting J, Witte HM, Xing P, Bernard V, Stölting S, Lohneis P, Janke F, Salehi M, Chen X, Kusch K, Sültmann H, Chteinberg E, Fischer A, Siebert R, et al. Genome-wide DNA methylation-analysis of blastic plasmacytoid dendritic cell neoplasm identifies distinct molecular features. Leukemia. PMID 38600314 DOI: 10.1038/s41375-024-02240-8 |
0.12 |
|
| 2021 |
Li D, Cheng S, Pei Y, Sommar P, Kärner J, Herter EK, Toma MA, Zhang L, Pham K, Cheung YT, Liu Z, Chen X, Eidsmo L, Deng Q, Landén NX. Single-cell analysis reveals MHCII expressing keratinocytes in pressure ulcers with worse healing outcomes. The Journal of Investigative Dermatology. PMID 34536485 DOI: 10.1016/j.jid.2021.07.176 |
0.115 |
|
| 2021 |
Zhao XK, Xing P, Song X, Zhao M, Zhao L, Dang Y, Lei LL, Xu RH, Han WL, Wang PP, Yang MM, Hu JF, Zhong K, Zhou FY, Han XN, ... ... Chen X, et al. Focal amplifications are associated with chromothripsis events and diverse prognoses in gastric cardia adenocarcinoma. Nature Communications. 12: 6489. PMID 34764264 DOI: 10.1038/s41467-021-26745-3 |
0.09 |
|
| 2023 |
Zhao Y, Chen X, Chen J, Qi X. Decoding Connectivity Map-based drug repurposing for oncotherapy. Briefings in Bioinformatics. PMID 37068308 DOI: 10.1093/bib/bbad142 |
0.071 |
|
| 2022 |
He W, Zheng S, Chen X, Lu D, Zeng Z. Alkaline aging significantly affects Mn(II) adsorption capacity of polypropylene microplastics in water environments: Critical roles of natural organic matter and colloidal particles. Journal of Hazardous Materials. 438: 129568. PMID 35999752 DOI: 10.1016/j.jhazmat.2022.129568 |
0.062 |
|
| 2024 |
Chen X, He J, Tan C, Xu Y, Zhao L. infection in a non‑endemic area: A case report. Experimental and Therapeutic Medicine. 27: 106. PMID 38356667 DOI: 10.3892/etm.2024.12394 |
0.059 |
|
| 2023 |
Chen X, Zhao Y, Zhong Y, Chen J, Qi X. Deciphering the functional roles of transporter proteins in subcellular metal transportation of plants. Planta. 258: 17. PMID 37314548 DOI: 10.1007/s00425-023-04170-8 |
0.045 |
|
| 2017 |
An J, Chen X, Sun Y. Pentoxifylline intervention and drug action in scalping forehead flap for large temporal cutaneous defects. Pakistan Journal of Pharmaceutical Sciences. 30: 1173-1177. PMID 28671102 |
0.033 |
|
| 2024 |
Huo J, Xu Y, Chen X, Yu J, Zhao L. Inverse association between type 2 diabetes and hepatocellular carcinoma in East Asian populations. Frontiers in Endocrinology. 14: 1308561. PMID 38234424 DOI: 10.3389/fendo.2023.1308561 |
0.021 |
|
| Hide low-probability matches. |