| Year |
Citation |
Score |
| 2012 |
Taliaferro LP, Keen EF, Sanchez-Alberola N, Wolf RE. Transcription activation by Escherichia coli Rob at class II promoters: protein-protein interactions between Rob's N-terminal domain and the σ(70) subunit of RNA polymerase. Journal of Molecular Biology. 419: 139-57. PMID 22465792 DOI: 10.1016/J.Jmb.2012.03.019 |
0.431 |
|
| 2011 |
Zafar MA, Sanchez-Alberola N, Wolf RE. Genetic evidence for a novel interaction between transcriptional activator SoxS and region 4 of the σ(70) subunit of RNA polymerase at class II SoxS-dependent promoters in Escherichia coli. Journal of Molecular Biology. 407: 333-53. PMID 21195716 DOI: 10.1016/J.Jmb.2010.12.037 |
0.473 |
|
| 2010 |
Zafar MA, Shah IM, Wolf RE. Protein-protein interactions between sigma(70) region 4 of RNA polymerase and Escherichia coli SoxS, a transcription activator that functions by the prerecruitment mechanism: evidence for "off-DNA" and "on-DNA" interactions. Journal of Molecular Biology. 401: 13-32. PMID 20595001 DOI: 10.1016/J.Jmb.2010.05.052 |
0.454 |
|
| 2009 |
Griffith KL, Fitzpatrick MM, Keen EF, Wolf RE. Two functions of the C-terminal domain of Escherichia coli Rob: mediating "sequestration-dispersal" as a novel off-on switch for regulating Rob's activity as a transcription activator and preventing degradation of Rob by Lon protease. Journal of Molecular Biology. 388: 415-30. PMID 19289129 DOI: 10.1016/J.Jmb.2009.03.023 |
0.443 |
|
| 2006 |
Shah IM, Wolf RE. Inhibition of Lon-dependent degradation of the Escherichia coli transcription activator SoxS by interaction with 'soxbox' DNA or RNA polymerase. Molecular Microbiology. 60: 199-208. PMID 16556231 DOI: 10.1111/J.1365-2958.2006.05086.X |
0.466 |
|
| 2006 |
Shah IM, Wolf RE. Sequence requirements for Lon-dependent degradation of the Escherichia coli transcription activator SoxS: identification of the SoxS residues critical to proteolysis and specific inhibition of in vitro degradation by a peptide comprised of the N-terminal 21 amino acid residues. Journal of Molecular Biology. 357: 718-31. PMID 16460757 DOI: 10.1016/J.Jmb.2005.12.088 |
0.411 |
|
| 2005 |
Griffith KL, Becker SM, Wolf RE. Characterization of TetD as a transcriptional activator of a subset of genes of the Escherichia coli SoxS/MarA/Rob regulon. Molecular Microbiology. 56: 1103-17. PMID 15853893 DOI: 10.1111/J.1365-2958.2005.04599.X |
0.544 |
|
| 2004 |
Griffith KL, Wolf RE. Genetic evidence for pre-recruitment as the mechanism of transcription activation by SoxS of Escherichia coli: the dominance of DNA binding mutations of SoxS. Journal of Molecular Biology. 344: 1-10. PMID 15504398 DOI: 10.1016/J.Jmb.2004.09.007 |
0.503 |
|
| 2004 |
Shah IM, Wolf RE. Novel protein--protein interaction between Escherichia coli SoxS and the DNA binding determinant of the RNA polymerase alpha subunit: SoxS functions as a co-sigma factor and redeploys RNA polymerase from UP-element-containing promoters to SoxS-dependent promoters during oxidative stress. Journal of Molecular Biology. 343: 513-32. PMID 15465042 DOI: 10.1016/J.Jmb.2004.08.057 |
0.507 |
|
| 2004 |
Griffith KL, Shah IM, Wolf RE. Proteolytic degradation of Escherichia coli transcription activators SoxS and MarA as the mechanism for reversing the induction of the superoxide (SoxRS) and multiple antibiotic resistance (Mar) regulons. Molecular Microbiology. 51: 1801-16. PMID 15009903 DOI: 10.1046/J.1365-2958.2003.03952.X |
0.481 |
|
| 2002 |
Griffith KL, Wolf RE. A comprehensive alanine scanning mutagenesis of the Escherichia coli transcriptional activator SoxS: identifying amino acids important for DNA binding and transcription activation. Journal of Molecular Biology. 322: 237-57. PMID 12217688 DOI: 10.1016/S0022-2836(02)00782-9 |
0.504 |
|
| 2002 |
Griffith KL, Shah IM, Myers TE, O'Neill MC, Wolf RE. Evidence for "pre-recruitment" as a new mechanism of transcription activation in Escherichia coli: the large excess of SoxS binding sites per cell relative to the number of SoxS molecules per cell. Biochemical and Biophysical Research Communications. 291: 979-86. PMID 11866462 DOI: 10.1006/Bbrc.2002.6559 |
0.485 |
|
| 2002 |
Griffith KL, Wolf RE. Measuring beta-galactosidase activity in bacteria: cell growth, permeabilization, and enzyme assays in 96-well arrays. Biochemical and Biophysical Research Communications. 290: 397-402. PMID 11779182 DOI: 10.1006/Bbrc.2001.6152 |
0.312 |
|
| 2002 |
Griffith KL, Shah IM, Myers TE, O'Neill MC, Wolf RE. Erratum to “Evidence for `Pre-recruitment' as a New Mechanism of Transcription Activation in Escherichia coli: The Large Excess of SoxS Binding Sites per Cell Relative to the Number of SoxS Molecules per Cell” [Biochem. Biophys. Res. Commun. 291 (2002) 979–986] Biochemical and Biophysical Research Communications. 294: 1191. DOI: 10.1016/S0006-291X(02)00590-9 |
0.414 |
|
| 2001 |
Griffith KL, Wolf RE. Systematic mutagenesis of the DNA binding sites for SoxS in the Escherichia coli zwf and fpr promoters: identifying nucleotides required for DNA binding and transcription activation. Molecular Microbiology. 40: 1141-54. PMID 11401718 DOI: 10.1046/J.1365-2958.2001.02456.X |
0.482 |
|
| 1999 |
Wood TI, Griffith KL, Fawcett WP, Jair KW, Schneider TD, Wolf RE. Interdependence of the position and orientation of SoxS binding sites in the transcriptional activation of the class I subset of Escherichia coli superoxide-inducible promoters. Molecular Microbiology. 34: 414-30. PMID 10564484 DOI: 10.1046/J.1365-2958.1999.01598.X |
0.501 |
|
| 1999 |
Lundberg BE, Wolf RE, Dinauer MC, Xu Y, Fang FC. Glucose 6-phosphate dehydrogenase is required for Salmonella typhimurium virulence and resistance to reactive oxygen and nitrogen intermediates. Infection and Immunity. 67: 436-8. PMID 9864251 DOI: 10.1128/Iai.67.1.436-438.1999 |
0.302 |
|
| 1996 |
Jair K, Fawcett WP, Fujita N, Ishihama A, Wolf RE. Ambidextrous transcriptional activation by SoxS: requirement for the C-terminal domain of the RNA polymerase alpha subunit in a subset of Escherichia coli superoxide-inducible genes. Molecular Microbiology. 19: 307-317. PMID 8825776 DOI: 10.1046/J.1365-2958.1996.368893.X |
0.509 |
|
| 1996 |
Martin RG, Jair KW, Wolf RE, Rosner JL. Autoactivation of the marRAB multiple antibiotic resistance operon by the MarA transcriptional activator in Escherichia coli. Journal of Bacteriology. 178: 2216-23. PMID 8636021 DOI: 10.1128/jb.178.8.2216-2223.1996 |
0.468 |
|
| 1996 |
Jair KW, Yu X, Skarstad K, Thöny B, Fujita N, Ishihama A, Wolf RE. Transcriptional activation of promoters of the superoxide and multiple antibiotic resistance regulons by Rob, a binding protein of the Escherichia coli origin of chromosomal replication Journal of Bacteriology. 178: 2507-2513. PMID 8626315 DOI: 10.1128/Jb.178.9.2507-2513.1996 |
0.553 |
|
| 1995 |
Jair K, Martin RG, Rosner JL, Fujita N, Ishihama A, Wolf RE. Purification and regulatory properties of MarA protein, a transcriptional activator of Escherichia coli multiple antibiotic and superoxide resistance promoters. Journal of Bacteriology. 177: 7100-7104. PMID 8522515 DOI: 10.1128/Jb.177.24.7100-7104.1995 |
0.512 |
|
| 1995 |
Fawcett WP, Wolf RE. Genetic definition of the Escherichia coli zwf "soxbox," the DNA binding site for SoxS-mediated induction of glucose 6-phosphate dehydrogenase in response to superoxide. Journal of Bacteriology. 177: 1742-1750. PMID 7896696 DOI: 10.1128/Jb.177.7.1742-1750.1995 |
0.531 |
|
| 1995 |
Chang JT, Green CB, Wolf RE. Inhibition of translation initiation on Escherichia coli gnd mRNA by formation of a long-range secondary structure involving the ribosome binding site and the internal complementary sequence. Journal of Bacteriology. 177: 6560-7. PMID 7592434 DOI: 10.1128/Jb.177.22.6560-6567.1995 |
0.417 |
|
| 1994 |
Pease AJ, Wolf RE. Determination of the growth rate-regulated steps in expression of the Escherichia coli K-12 gnd gene. Journal of Bacteriology. 176: 115-22. PMID 8282686 DOI: 10.1128/Jb.176.1.115-122.1994 |
0.386 |
|
| 1994 |
Fawcett WP, Wolf RE. Purification of a MaIE‐SoxS fusion protein and identification of the control sites of Escherichia coli superoxide‐inducible genes Molecular Microbiology. 14: 669-679. PMID 7891555 DOI: 10.1111/J.1365-2958.1994.Tb01305.X |
0.519 |
|
| 1992 |
Rowley DL, Fawcett WP, Wolf RE. Molecular characterization of mutations affecting expression level and growth rate-dependent regulation of the Escherichia coli zwf gene. Journal of Bacteriology. 174: 623-6. PMID 1729252 DOI: 10.1128/Jb.174.2.623-626.1992 |
0.436 |
|
| 1992 |
Egan SE, Fliege R, Tong S, Shibata A, Wolf RE, Conway T. Molecular characterization of the Entner-Doudoroff pathway in Escherichia coli: sequence analysis and localization of promoters for the edd-eda operon. Journal of Bacteriology. 174: 4638-4646. PMID 1624451 DOI: 10.1128/Jb.174.14.4638-4646.1992 |
0.346 |
|
| 1991 |
Rowley DL, Pease AJ, Wolf RE. Genetic and physical analyses of the growth rate-dependent regulation of Escherichia coli zwf expression. Journal of Bacteriology. 173: 4660-7. PMID 1906868 DOI: 10.1128/Jb.173.15.4660-4667.1991 |
0.405 |
|
| 1991 |
Broedel SE, Wolf RE. Growth-phase-dependent induction of 6-phosphogluconate dehydrogenase and glucose 6-phosphate dehydrogenase in the cyanobacterium Synechococcus sp. PCC7942. Gene. 109: 71-79. PMID 1756984 DOI: 10.1016/0378-1119(91)90590-8 |
0.421 |
|
| 1991 |
Rowley DL, Wolf RE. Molecular characterization of the Escherichia coli K-12 zwf gene encoding glucose 6-phosphate dehydrogenase. Journal of Bacteriology. 173: 968-77. PMID 1704005 DOI: 10.1128/Jb.173.3.968-977.1991 |
0.499 |
|
| 1990 |
Jones WR, Barcak GJ, Wolf RE. Altered growth-rate-dependent regulation of 6-phosphogluconate dehydrogenase level in hisT mutants of Salmonella typhimurium and Escherichia coli. Journal of Bacteriology. 172: 1197-205. PMID 2407715 DOI: 10.1128/Jb.172.3.1197-1205.1990 |
0.438 |
|
| 1990 |
Broedel SE, Wolf RE. Genetic tagging, cloning, and DNA sequence of the Synechococcus sp. strain PCC 7942 gene (gnd) encoding 6-phosphogluconate dehydrogenase. Journal of Bacteriology. 172: 4023-4031. PMID 2113917 DOI: 10.1128/Jb.172.7.4023-4031.1990 |
0.434 |
|
| 1989 |
Carter-Muenchau P, Wolf RE. Growth-rate-dependent regulation of 6-phosphogluconate dehydrogenase level mediated by an anti-Shine-Dalgarno sequence located within the Escherichia coli gnd structural gene. Proceedings of the National Academy of Sciences of the United States of America. 86: 1138-1142. PMID 2465546 DOI: 10.1073/Pnas.86.4.1138 |
0.496 |
|
| 1988 |
Barcak GJ, Wolf RE. Comparative nucleotide sequence analysis of growth-rate-regulated gnd alleles from natural isolates of Escherichia coli and from Salmonella typhimurium LT-2 Journal of Bacteriology. 170: 372-379. PMID 3275621 DOI: 10.1128/Jb.170.1.372-379.1988 |
0.487 |
|
| 1988 |
Barcak GJ, Wolf RE. Growth-rate-dependent expression and cloning of gnd alleles from natural isolates of Escherichia coli Journal of Bacteriology. 170: 365-371. PMID 2826398 DOI: 10.1128/Jb.170.1.365-371.1988 |
0.451 |
|
| 1987 |
Carter-Muenchau P, Wolf RE. A method for cloning mixtures of long, synthetic oligodeoxynucleotides. Gene Analysis Techniques. 4: 105-110. PMID 3507391 DOI: 10.1016/0735-0651(87)90003-3 |
0.438 |
|
| 1986 |
Barcak GJ, Wolf RE. A method for unidirectional deletion mutagenesis with application to nucleotide sequencing and preparation of gene fusions Gene. 49: 119-128. PMID 3552883 DOI: 10.1016/0378-1119(86)90391-4 |
0.452 |
|
| 1985 |
Baker HV, Wolf RE. Essential site for growth rate-dependent regulation within the Escherichia coli gnd structural gene. Proceedings of the National Academy of Sciences of the United States of America. 81: 7669-73. PMID 6440141 DOI: 10.1073/PNAS.81.24.7669 |
0.399 |
|
| 1984 |
Nasoff MS, Baker HV, Wolf RE. DNA sequence of the Escherichia coli gene, gnd, for 6-phosphogluconate dehydrogenase Gene. 27: 253-264. PMID 6329905 DOI: 10.1016/0378-1119(84)90070-2 |
0.511 |
|
| 1983 |
Baker HV, Wolf RE. Growth rate-dependent regulation of 6-phosphogluconate dehydrogenase level in Escherichia coli K-12: beta-galactosidase expression in gnd-lac operon fusion strains. Journal of Bacteriology. 153: 771-81. PMID 6337127 DOI: 10.1128/jb.153.2.771-781.1983 |
0.395 |
|
| 1981 |
Nasoff MS, Wolf RE. Molecular cloning, correlation of genetic and restriction maps, and determination of the direction of transcription of gnd of Escherichia coli. Journal of Bacteriology. 143: 731-41. PMID 6259121 DOI: 10.1128/jb.143.2.731-741.1980 |
0.347 |
|
| 1974 |
Wolf RE, Fraenkel DG. Isolation of Specialized Transducing Bacteriophages for Gluconate 6-Phosphate Dehydrogenase (gnd) of Escherichia coli Journal of Bacteriology. 117: 468-476. PMID 4590471 DOI: 10.1128/Jb.117.2.468-476.1974 |
0.401 |
|
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