| Year |
Citation |
Score |
| 2020 |
Fortelny N, Bock C. Knowledge-primed neural networks enable biologically interpretable deep learning on single-cell sequencing data. Genome Biology. 21: 190. PMID 32746932 DOI: 10.1186/S13059-020-02100-5 |
0.321 |
|
| 2020 |
Rendeiro AF, Krausgruber T, Fortelny N, Zhao F, Penz T, Farlik M, Schuster LC, Nemc A, Tasnády S, Réti M, Mátrai Z, Alpár D, Bödör C, Schmidl C, Bock C. Chromatin mapping and single-cell immune profiling define the temporal dynamics of ibrutinib response in CLL. Nature Communications. 11: 577. PMID 31996669 DOI: 10.1038/S41467-019-14081-6 |
0.302 |
|
| 2018 |
Dufour A, Bellac CL, Eckhard U, Solis N, Klein T, Kappelhoff R, Fortelny N, Jobin P, Rozmus J, Mark J, Pavlidis P, Dive V, Barbour SJ, Overall CM. C-terminal truncation of IFN-γ inhibits proinflammatory macrophage responses and is deficient in autoimmune disease. Nature Communications. 9: 2416. PMID 29925830 DOI: 10.1038/S41467-018-04717-4 |
0.453 |
|
| 2017 |
Fortelny N, Overall CM, Pavlidis P, Freue GVC. Can we predict protein from mRNA levels? Nature. 547: E19-E20. PMID 28748932 DOI: 10.1038/Nature22293 |
0.492 |
|
| 2017 |
Fortelny N, Butler GS, Overall CM, Pavlidis P. Protease-inhibitor interaction predictions: Lessons on the complexity of protein-protein interactions. Molecular & Cellular Proteomics : McP. PMID 28385878 DOI: 10.1074/Mcp.M116.065706 |
0.532 |
|
| 2017 |
Scott NE, Rogers LD, Prudova A, Brown NF, Fortelny N, Overall CM, Foster LJ. Interactome disassembly during apoptosis occurs independent of caspase cleavage. Molecular Systems Biology. 13: 906. PMID 28082348 DOI: 10.15252/Msb.20167067 |
0.356 |
|
| 2016 |
Prudova A, Gocheva V, Auf dem Keller U, Eckhard U, Olson OC, Akkari L, Butler GS, Fortelny N, Lange PF, Mark JC, Joyce JA, Overall CM. TAILS N-Terminomics and Proteomics Show Protein Degradation Dominates over Proteolytic Processing by Cathepsins in Pancreatic Tumors. Cell Reports. PMID 27477282 DOI: 10.1016/J.Celrep.2016.06.086 |
0.378 |
|
| 2016 |
Anania VG, Yu K, Gnad F, Pferdehirt RR, Li H, Ma T, Jeon D, Fortelny N, Forrest W, Ashkenazi A, Overall CM, Lill JR. Uncovering a dual regulatory role for caspases during endoplasmic reticulum stress-induced cell death. Molecular & Cellular Proteomics : McP. PMID 27125827 DOI: 10.1074/Mcp.M115.055376 |
0.317 |
|
| 2015 |
Fortelny N, Pavlidis P, Overall CM. The path of no return-Truncated protein N-termini and current ignorance of their genesis. Proteomics. 15: 2547-52. PMID 26010509 DOI: 10.1002/Pmic.201500043 |
0.536 |
|
| 2015 |
Fortelny N, Yang S, Pavlidis P, Lange PF, Overall CM. Proteome TopFIND 3.0 with TopFINDer and PathFINDer: database and analysis tools for the association of protein termini to pre- and post-translational events. Nucleic Acids Research. 43: D290-7. PMID 25332401 DOI: 10.1093/Nar/Gku1012 |
0.555 |
|
| 2014 |
Prudova A, Serrano K, Eckhard U, Fortelny N, Devine DV, Overall CM. TAILS N-terminomics of human platelets reveals pervasive metalloproteinase-dependent proteolytic processing in storage. Blood. 124: e49-60. PMID 25331112 DOI: 10.1182/Blood-2014-04-569640 |
0.387 |
|
| 2014 |
Fortelny N, Cox JH, Kappelhoff R, Starr AE, Lange PF, Pavlidis P, Overall CM. Network analyses reveal pervasive functional regulation between proteases in the human protease web. Plos Biology. 12: e1001869. PMID 24865846 DOI: 10.1371/Journal.Pbio.1001869 |
0.54 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2020 |
Rojahn TB, Vorstandlechner V, Krausgruber T, Bauer WM, Alkon N, Bangert C, Thaler FM, Sadeghyar F, Fortelny N, Gernedl V, Rindler K, Elbe-Bürger A, Bock C, Mildner M, Brunner PM. Single-cell transcriptomics combined with interstitial fluid proteomics defines cell-type-specific immune regulation in atopic dermatitis. The Journal of Allergy and Clinical Immunology. PMID 32344053 DOI: 10.1016/J.Jaci.2020.03.041 |
0.288 |
|
| 2020 |
Krausgruber T, Fortelny N, Fife-Gernedl V, Senekowitsch M, Schuster LC, Lercher A, Nemc A, Schmidl C, Rendeiro AF, Bergthaler A, Bock C. Structural cells are key regulators of organ-specific immune responses. Nature. 583: 296-302. PMID 32612232 DOI: 10.1038/S41586-020-2424-4 |
0.286 |
|
| 2019 |
Halbritter F, Farlik M, Schwentner R, Jug G, Fortelny N, Schnoller T, Pisa H, Schuster LC, Reinprecht A, Czech T, Gojo J, Holter W, Minkov M, Bauer WM, Simonitsch-Klupp I, et al. Epigenomics and Single-cell Sequencing Define a Developmental Hierarchy in Langerhans Cell Histiocytosis. Cancer Discovery. PMID 31345789 DOI: 10.1158/2159-8290.Cd-19-0138 |
0.276 |
|
| 2020 |
Marquina-Sanchez B, Fortelny N, Farlik M, Vieira A, Collombat P, Bock C, Kubicek S. Single-cell RNA-seq with spike-in cells enables accurate quantification of cell-specific drug effects in pancreatic islets. Genome Biology. 21: 106. PMID 32375897 DOI: 10.1186/S13059-020-02006-2 |
0.262 |
|
| 2018 |
Klughammer J, Kiesel B, Roetzer T, Fortelny N, Nemc A, Nenning KH, Furtner J, Sheffield NC, Datlinger P, Peter N, Nowosielski M, Augustin M, Mischkulnig M, Ströbel T, Alpar D, et al. The DNA methylation landscape of glioblastoma disease progression shows extensive heterogeneity in time and space. Nature Medicine. PMID 30150718 DOI: 10.1038/S41591-018-0156-X |
0.235 |
|
| 2020 |
Halbritter F, Farlik M, Schwentner R, Jug G, Fortelny N, Simonitsch-Klupp I, Bauer W, Bock C, Hutter C. Abstract B69: Epigenomics and single-cell sequencing define a developmental hierarchy in Langerhans cell histiocytosis Cancer Research. 80. DOI: 10.1158/1538-7445.Pedca19-B69 |
0.207 |
|
| 2023 |
Fetahu IS, Esser-Skala W, Dnyansagar R, Sindelar S, Rifatbegovic F, Bileck A, Skos L, Bozsaky E, Lazic D, Shaw L, Tötzl M, Tarlungeanu D, Bernkopf M, Rados M, Weninger W, ... ... Fortelny N, et al. Single-cell transcriptomics and epigenomics unravel the role of monocytes in neuroblastoma bone marrow metastasis. Nature Communications. 14: 3620. PMID 37365178 DOI: 10.1038/s41467-023-39210-0 |
0.166 |
|
| 2020 |
Rojahn T, Vorstandlechner V, Krausgruber T, Bauer W, Alkon N, Bangert C, Fortelny N, Rindler K, Elbe-Burger A, Bock C, Mildner M, Brunner P. 161 Single-cell RNA sequencing combined with interstitial fluid proteomics defines cell-type-specific immune gene regulation in atopic dermatitis Journal of Investigative Dermatology. 140: S19. DOI: 10.1016/j.jid.2020.03.165 |
0.162 |
|
| 2023 |
Esser-Skala W, Fortelny N. Reliable interpretability of biology-inspired deep neural networks. Npj Systems Biology and Applications. 9: 50. PMID 37816807 DOI: 10.1038/s41540-023-00310-8 |
0.155 |
|
| 2023 |
Kiss MG, Papac-Miličević N, Porsch F, Tsiantoulas D, Hendrikx T, Takaoka M, Dinh HQ, Narzt MS, Göderle L, Ozsvár-Kozma M, Schuster M, Fortelny N, Hladik A, Knapp S, Gruber F, et al. Cell-autonomous regulation of complement C3 by factor H limits macrophage efferocytosis and exacerbates atherosclerosis. Immunity. PMID 37499656 DOI: 10.1016/j.immuni.2023.06.026 |
0.149 |
|
| 2021 |
Bangert C, Rindler K, Krausgruber T, Alkon N, Thaler FM, Kurz H, Ayub T, Demirtas D, Fortelny N, Vorstandlechner V, Bauer WM, Quint T, Mildner M, Jonak C, Elbe-Bürger A, et al. Persistence of mature dendritic cells, T2A, and Tc2 cells characterize clinically resolved atopic dermatitis under IL-4Rα blockade. Science Immunology. 6. PMID 33483337 DOI: 10.1126/sciimmunol.abe2749 |
0.147 |
|
| 2022 |
Boccuni L, Podgorschek E, Schmiedeberg M, Platanitis E, Traxler P, Fischer P, Schirripa A, Novoszel P, Nebreda AR, Arthur JSC, Fortelny N, Farlik M, Sexl V, Bock C, Sibilia M, et al. Stress signaling boosts interferon-induced gene transcription in macrophages. Science Signaling. 15: eabq5389. PMID 36512641 DOI: 10.1126/scisignal.abq5389 |
0.145 |
|
| 2021 |
Rindler K, Krausgruber T, Thaler FM, Alkon N, Bangert C, Kurz H, Fortelny N, Rojahn TB, Jonak C, Griss J, Bock C, Brunner PM. Spontaneously Resolved Atopic Dermatitis Shows Melanocyte and Immune Cell Activation Distinct From Healthy Control Skin. Frontiers in Immunology. 12: 630892. PMID 33717163 DOI: 10.3389/fimmu.2021.630892 |
0.135 |
|
| 2021 |
Reitermaier R, Krausgruber T, Fortelny N, Ayub T, Vieyra-Garcia PA, Kienzl P, Wolf P, Scharrer A, Fiala C, Kölz M, Hiess M, Vierhapper M, Schuster C, Spittler A, Worda C, et al. αβγδ T cells play a vital role in fetal human skin development and immunity. The Journal of Experimental Medicine. 218. PMID 33561194 DOI: 10.1084/jem.20201189 |
0.121 |
|
| 2022 |
Reitermaier R, Ayub T, Staller J, Kienzl P, Fortelny N, Vieyra-Garcia PA, Worda C, Fiala C, Staud C, Eppel W, Scharrer A, Krausgruber T, Elbe-Bürger A. The molecular and phenotypic makeup of fetal human skin T lymphocytes. Development (Cambridge, England). 149. PMID 34604909 DOI: 10.1242/dev.199781 |
0.12 |
|
| 2020 |
Ruiz-Villalba A, Romero JP, Hernandez SC, Vilas-Zornoza A, Fortelny N, Castro-Labrador L, San Martin-Uriz P, Lorenzo-Vivas E, García-Olloqui P, Palacios M, Gavira JJ, Bastarrika G, Janssens S, Wu M, Iglesias E, et al. Single-Cell RNA-seq Analysis Reveals a Crucial Role for Collagen Triple Helix Repeat Containing 1 (CTHRC1) Cardiac Fibroblasts after Myocardial Infarction. Circulation. PMID 32972203 DOI: 10.1161/CIRCULATIONAHA.119.044557 |
0.106 |
|
| 2023 |
Lara-Astiaso D, Goñi-Salaverri A, Mendieta-Esteban J, Narayan N, Del Valle C, Gross T, Giotopoulos G, Beinortas T, Navarro-Alonso M, Aguado-Alvaro LP, Zazpe J, Marchese F, Torrea N, Calvo IA, Lopez CK, ... ... Fortelny N, et al. In vivo screening characterizes chromatin factor functions during normal and malignant hematopoiesis. Nature Genetics. PMID 37580596 DOI: 10.1038/s41588-023-01471-2 |
0.103 |
|
| 2020 |
Nenning KH, Furtner J, Kiesel B, Schwartz E, Roetzer T, Fortelny N, Bock C, Grisold A, Marko M, Leutmezer F, Liu H, Golland P, Stoecklein S, Hainfellner JA, Kasprian G, et al. Distributed changes of the functional connectome in patients with glioblastoma. Scientific Reports. 10: 18312. PMID 33110138 DOI: 10.1038/s41598-020-74726-1 |
0.099 |
|
| 2023 |
Klughammer J, Romanovskaia D, Nemc A, Posautz A, Seid CA, Schuster LC, Keinath MC, Lugo Ramos JS, Kosack L, Evankow A, Printz D, Kirchberger S, Ergüner B, Datlinger P, Fortelny N, et al. Comparative analysis of genome-scale, base-resolution DNA methylation profiles across 580 animal species. Nature Communications. 14: 232. PMID 36646694 DOI: 10.1038/s41467-022-34828-y |
0.08 |
|
| 2021 |
Watzenböck ML, Gorki AD, Quattrone F, Gawish R, Schwarz S, Lambers C, Jaksch P, Lakovits K, Zahalka S, Rahimi N, Starkl P, Symmank D, Artner T, Pattaroni C, Fortelny N, et al. Multi-omics profiling predicts allograft function after lung transplantation. The European Respiratory Journal. PMID 34244315 DOI: 10.1183/13993003.03292-2020 |
0.065 |
|
| 2020 |
Watzenboeck M, Gorki A, Quattrone F, Gawish R, Schwarz S, Lambers C, Jaksch P, Lakovits K, Symmank D, Starkl P, Zahalka S, Artner T, Fortelny N, Klepetko W, Hoetzenecker K, et al. Bronchoalveolar Lavage Lipidomic Profiles Can Predict Short-Term Changes in Lung Function in Lung Transplant Recipients The Journal of Heart and Lung Transplantation. 39: S114. DOI: 10.1016/j.healun.2020.01.987 |
0.057 |
|
| 2020 |
Watzenboeck M, Gorki A, Quattrone F, Gawish R, Schwarz S, Lambers C, Jaksch P, Lakovits K, Symmank D, Starkl P, Zahalka S, Artner T, Fortelny N, Klepetko W, Hoetzenecker K, et al. Temporal Dynamics of the Pulmonary Microbiome after Lung Transplantation The Journal of Heart and Lung Transplantation. 39: S115. DOI: 10.1016/j.healun.2020.01.989 |
0.015 |
|
| Hide low-probability matches. |