| Year |
Citation |
Score |
| 2024 |
Sun X, Reiner AS, Tran AP, Watt GP, Oh JH, Mellemkjær L, Lynch CF, Knight JA, John EM, Malone KE, Liang X, Woods M, Derkach A, Concannon P, Bernstein JL, et al. A genome-wide association study of contralateral breast cancer in the Women's Environmental Cancer and Radiation Epidemiology Study. Breast Cancer Research : Bcr. 26: 16. PMID 38263039 DOI: 10.1186/s13058-024-01765-1 |
0.488 |
|
| 2024 |
Elkin R, Oh JH, Dela Cruz F, Norton L, Deasy JO, Kung AL, Tannenbaum AR. Dynamic network curvature analysis of gene expression reveals novel potential therapeutic targets in sarcoma. Scientific Reports. 14: 488. PMID 38177639 DOI: 10.1038/s41598-023-49930-4 |
0.467 |
|
| 2023 |
Choi W, Liu CJ, Alam SR, Oh JH, Vaghjiani R, Humm J, Weber W, Adusumilli PS, Deasy JO, Lu W. Preoperative F-FDG PET/CT and CT radiomics for identifying aggressive histopathological subtypes in early stage lung adenocarcinoma. Computational and Structural Biotechnology Journal. 21: 5601-5608. PMID 38034400 DOI: 10.1016/j.csbj.2023.11.008 |
0.475 |
|
| 2023 |
Simhal AK, Maclachlan KH, Elkin R, Zhu J, Norton L, Deasy JO, Oh JH, Usmani SZ, Tannenbaum A. Gene interaction network analysis in multiple myeloma detects complex immune dysregulation associated with shorter survival. Blood Cancer Journal. 13: 175. PMID 38030619 DOI: 10.1038/s41408-023-00935-2 |
0.471 |
|
| 2023 |
Zhu J, Veeraraghavan H, Jiang J, Oh JH, Norton L, Deasy JO, Tannenbaum A. Wasserstein HOG: Local Directionality Extraction via Optimal Transport. Ieee Transactions On Medical Imaging. PMID 37874704 DOI: 10.1109/TMI.2023.3325295 |
0.498 |
|
| 2023 |
Oh JH, Tannenbaum A, Deasy JO. Improved prediction of drug-induced liver injury literature using natural language processing and machine learning methods. Frontiers in Genetics. 14: 1161047. PMID 37529777 DOI: 10.3389/fgene.2023.1161047 |
0.458 |
|
| 2023 |
Zhu J, Oh JH, Simhal AK, Elkin R, Norton L, Deasy JO, Tannenbaum A. Geometric graph neural networks on multi-omics data to predict cancer survival outcomes. Computers in Biology and Medicine. 163: 107117. PMID 37329617 DOI: 10.1016/j.compbiomed.2023.107117 |
0.511 |
|
| 2023 |
Oh JH, Lee S, Thor M, Rosenstein BS, Tannenbaum A, Kerns S, Deasy JO. Predicting the germline dependence of hematuria risk in prostate cancer radiotherapy patients. Radiotherapy and Oncology : Journal of the European Society For Therapeutic Radiology and Oncology. 185: 109723. PMID 37244355 DOI: 10.1016/j.radonc.2023.109723 |
0.68 |
|
| 2022 |
Kang M, Oh JH. Editorial of Special Issue "Deep Learning and Machine Learning in Bioinformatics". International Journal of Molecular Sciences. 23. PMID 35743052 DOI: 10.3390/ijms23126610 |
0.414 |
|
| 2022 |
Zhu J, Oh JH, Deasy JO, Tannenbaum AR. vWCluster: Vector-valued optimal transport for network based clustering using multi-omics data in breast cancer. Plos One. 17: e0265150. PMID 35286348 DOI: 10.1371/journal.pone.0265150 |
0.466 |
|
| 2022 |
Pouryahya M, Oh JH, Mathews JC, Belkhatir Z, Moosmüller C, Deasy JO, Tannenbaum AR. Pan-Cancer Prediction of Cell-Line Drug Sensitivity Using Network-Based Methods. International Journal of Molecular Sciences. 23. PMID 35163005 DOI: 10.3390/ijms23031074 |
0.753 |
|
| 2021 |
Elkin R, Oh JH, Liu YL, Selenica P, Weigelt B, Reis-Filho JS, Zamarin D, Deasy JO, Norton L, Levine AJ, Tannenbaum AR. Geometric network analysis provides prognostic information in patients with high grade serous carcinoma of the ovary treated with immune checkpoint inhibitors. Npj Genomic Medicine. 6: 99. PMID 34819508 DOI: 10.1038/s41525-021-00259-9 |
0.506 |
|
| 2021 |
Paudyal R, LoCastro E, Reyngold M, Do RK, Konar AS, Oh JH, Dave A, Yu K, Goodman KA, Shukla-Dave A. Longitudinal Monitoring of Simulated Interstitial Fluid Pressure for Pancreatic Ductal Adenocarcinoma Patients Treated with Stereotactic Body Radiotherapy. Cancers. 13. PMID 34503129 DOI: 10.3390/cancers13174319 |
0.448 |
|
| 2021 |
Paudyal R, Grkovski M, Oh JH, Schöder H, Nunez DA, Hatzoglou V, Deasy JO, Humm JL, Lee NY, Shukla-Dave A. Application of Community Detection Algorithm to Investigate the Correlation between Imaging Biomarkers of Tumor Metabolism, Hypoxia, Cellularity, and Perfusion for Precision Radiotherapy in Head and Neck Squamous Cell Carcinomas. Cancers. 13. PMID 34359810 DOI: 10.3390/cancers13153908 |
0.448 |
|
| 2021 |
Oh JH, Choi W, Ko E, Kang M, Tannenbaum A, Deasy JO. PathCNN: interpretable convolutional neural networks for survival prediction and pathway analysis applied to glioblastoma. Bioinformatics (Oxford, England). 37: i443-i450. PMID 34252964 DOI: 10.1093/bioinformatics/btab285 |
0.462 |
|
| 2021 |
Mahmood U, Apte A, Kanan C, Bates DDB, Corrias G, Manneli L, Oh JH, Erdi YE, Nguyen J, O'Deasy J, Shukla-Dave A. Quality control of radiomic features using 3D-printed CT phantoms. Journal of Medical Imaging (Bellingham, Wash.). 8: 033505. PMID 34222557 DOI: 10.1117/1.JMI.8.3.033505 |
0.462 |
|
| 2021 |
Oh JH, Apte AP, Katsoulakis E, Riaz N, Hatzoglou V, Yu Y, Mahmood U, Veeraraghavan H, Pouryahya M, Iyer A, Shukla-Dave A, Tannenbaum A, Lee NY, Deasy JO. Reproducibility of radiomic features using network analysis and its application in Wasserstein -means clustering. Journal of Medical Imaging (Bellingham, Wash.). 8: 031904. PMID 33954225 DOI: 10.1117/1.JMI.8.3.031904 |
0.513 |
|
| 2021 |
Paudyal R, Chen L, Oh JH, Zakeri K, Hatzoglou V, Tsai CJ, Lee N, Shukla-Dave A. Nongaussian Intravoxel Incoherent Motion Diffusion Weighted and Fast Exchange Regime Dynamic Contrast-Enhanced-MRI of Nasopharyngeal Carcinoma: Preliminary Study for Predicting Locoregional Failure. Cancers. 13. PMID 33800762 DOI: 10.3390/cancers13051128 |
0.476 |
|
| 2020 |
Lee S, Deasy JO, Oh JH, Di Meglio A, Dumas A, Menvielle G, Charles C, Boyault S, Rousseau M, Besse C, Thomas E, Boland A, Cottu P, Tredan O, Levy C, et al. Prediction of Breast Cancer Treatment-Induced Fatigue by Machine Learning Using Genome-Wide Association Data. Jnci Cancer Spectrum. 4: pkaa039. PMID 33490863 DOI: 10.1093/Jncics/Pkaa039 |
0.584 |
|
| 2020 |
Shah AD, Shridhar Konar A, Paudyal R, Oh JH, LoCastro E, Nuñez DA, Swinburne N, Vachha B, Ulaner GA, Young RJ, Holodny AI, Beal K, Shukla-Dave A, Hatzoglou V. Diffusion and Perfusion MRI Predicts Response Preceding and Shortly After Radiosurgery to Brain Metastases: A Pilot Study. Journal of Neuroimaging : Official Journal of the American Society of Neuroimaging. PMID 33370467 DOI: 10.1111/jon.12828 |
0.438 |
|
| 2020 |
Park KS, Kim SH, Oh JH, Kim SY. Highly accurate diagnosis of papillary thyroid carcinomas based on personalized pathways coupled with machine learning. Briefings in Bioinformatics. PMID 33341874 DOI: 10.1093/bib/bbaa336 |
0.479 |
|
| 2020 |
Oh JH, Tannenbaum A, Deasy JO. Identification of biological correlates associated with respiratory failure in COVID-19. Bmc Medical Genomics. 13: 186. PMID 33308225 DOI: 10.1186/s12920-020-00839-1 |
0.418 |
|
| 2020 |
Zhu J, Elkin R, Oh JH, Deasy JO, Tannenbaum A. A Vectorial Approach to Unbalanced Optimal Mass Transport. Ieee Access : Practical Innovations, Open Solutions. 8: 209224-209231. PMID 33274174 DOI: 10.1109/access.2020.3038567 |
0.404 |
|
| 2020 |
Pouryahya M, Oh JH, Javanmard P, Mathews JC, Belkhatir Z, Deasy JO, Tannenbaum A. aWCluster: A Novel Integrative Network-based Clustering of Multiomics for Subtype Analysis of Cancer Data. Ieee/Acm Transactions On Computational Biology and Bioinformatics. PMID 33226952 DOI: 10.1109/TCBB.2020.3039511 |
0.767 |
|
| 2020 |
von Reibnitz D, Yorke ED, Oh JH, Apte AP, Yang J, Pham H, Thor M, Wu AJ, Fleisher M, Gelb E, Deasy JO, Rimner A. Predictive Modeling of Thoracic Radiotherapy Toxicity and the Potential Role of Serum Alpha-2-Macroglobulin. Frontiers in Oncology. 10: 1395. PMID 32850450 DOI: 10.3389/Fonc.2020.01395 |
0.706 |
|
| 2020 |
Thor M, Oh JH, Apte AP, Deasy JO. Registering Study Analysis Plans (SAPs) Before Dissecting Your Data-Updating and Standardizing Outcome Modeling. Frontiers in Oncology. 10: 978. PMID 32670879 DOI: 10.3389/Fonc.2020.00978 |
0.688 |
|
| 2020 |
Katsoulakis E, Yu Y, Apte AP, Leeman JE, Katabi N, Morris L, Deasy JO, Chan TA, Lee NY, Riaz N, Hatzoglou V, Oh JH. Radiomic analysis identifies tumor subtypes associated with distinct molecular and microenvironmental factors in head and neck squamous cell carcinoma. Oral Oncology. 110: 104877. PMID 32619927 DOI: 10.1016/J.Oraloncology.2020.104877 |
0.602 |
|
| 2020 |
Kinh Do R, Reyngold M, Paudyal R, Oh JH, Konar AS, LoCastro E, Goodman KA, Shukla-Dave A. Diffusion-Weighted and Dynamic Contrast-Enhanced MRI Derived Imaging Metrics for Stereotactic Body Radiotherapy of Pancreatic Ductal Adenocarcinoma: Preliminary Findings. Tomography (Ann Arbor, Mich.). 6: 261-271. PMID 32548304 DOI: 10.18383/j.tom.2020.00015 |
0.455 |
|
| 2020 |
Konar AS, Fung M, Paudyal R, Oh JH, Mazaheri Y, Hatzoglou V, Shukla-Dave A. Diffusion-Weighted Echo Planar Imaging using MUltiplexed Sensitivity Encoding and Reverse Polarity Gradient in Head and Neck Cancer: An Initial Study. Tomography (Ann Arbor, Mich.). 6: 231-240. PMID 32548301 DOI: 10.18383/j.tom.2020.00014 |
0.466 |
|
| 2020 |
LoCastro E, Paudyal R, Mazaheri Y, Hatzoglou V, Oh JH, Lu Y, Konar AS, Vom Eigen K, Ho A, Ewing JR, Lee N, Deasy JO, Shukla-Dave A. Computational Modeling of Interstitial Fluid Pressure and Velocity in Head and Neck Cancer Based on Dynamic Contrast-Enhanced Magnetic Resonance Imaging: Feasibility Analysis. Tomography (Ann Arbor, Mich.). 6: 129-138. PMID 32548289 DOI: 10.18383/j.tom.2020.00005 |
0.587 |
|
| 2020 |
Swinburne N, LoCastro E, Paudyal R, Oh JH, Taunk NK, Shah A, Beal K, Vachha B, Young RJ, Holodny AI, Shukla-Dave A, Hatzoglou V. Computational Modeling of Interstitial Fluid Pressure and Velocity in Non-small Cell Lung Cancer Brain Metastases Treated With Stereotactic Radiosurgery. Frontiers in Neurology. 11: 402. PMID 32547470 DOI: 10.3389/Fneur.2020.00402 |
0.488 |
|
| 2020 |
Thor M, Deasy JO, Hu C, Gore E, Bar-Ad V, Robinson C, Wheatley M, Oh JH, Bogart J, Garces YI, Kavadi VS, Narayan S, Iyengar P, Witt JS, Welsh JW, et al. Modeling the impact of cardio-pulmonary irradiation on overall survival in NRG Oncology trial RTOG 0617. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 32398326 DOI: 10.1158/1078-0432.Ccr-19-2627 |
0.701 |
|
| 2020 |
Apte AP, Iyer A, Thor M, Pandya R, Haq R, Jiang J, LoCastro E, Shukla-Dave A, Sasankan N, Xiao Y, Hu YC, Elguindi S, Veeraraghavan H, Oh JH, Jackson A, et al. Library of deep-learning image segmentation and outcomes model-implementations. Physica Medica : Pm : An International Journal Devoted to the Applications of Physics to Medicine and Biology : Official Journal of the Italian Association of Biomedical Physics (Aifb). 73: 190-196. PMID 32371142 DOI: 10.1016/J.Ejmp.2020.04.011 |
0.7 |
|
| 2020 |
Oh JH, Pouryahya M, Iyer A, Apte AP, Deasy JO, Tannenbaum A. A novel kernel Wasserstein distance on Gaussian measures: An application of identifying dental artifacts in head and neck computed tomography. Computers in Biology and Medicine. 120: 103731. PMID 32217284 DOI: 10.1016/J.Compbiomed.2020.103731 |
0.574 |
|
| 2020 |
Lee S, Liang X, Woods M, Reiner AS, Concannon P, Bernstein L, Lynch CF, Boice JD, Deasy JO, Bernstein JL, Oh JH. Machine learning on genome-wide association studies to predict the risk of radiation-associated contralateral breast cancer in the WECARE Study. Plos One. 15: e0226157. PMID 32106268 DOI: 10.1371/Journal.Pone.0226157 |
0.62 |
|
| 2019 |
Hao J, Kim Y, Mallavarapu T, Oh JH, Kang M. Interpretable deep neural network for cancer survival analysis by integrating genomic and clinical data. Bmc Medical Genomics. 12: 189. PMID 31865908 DOI: 10.1186/S12920-019-0624-2 |
0.5 |
|
| 2019 |
Paudyal R, Lu Y, Hatzoglou V, Moreira A, Stambuk HE, Oh JH, Cunanan KM, Aramburu Nunez D, Mazaheri Y, Gonen M, Ho A, Fagin JA, Wong RJ, Shaha A, Tuttle RM, et al. Dynamic contrast-enhanced MRI model selection for predicting tumor aggressiveness in papillary thyroid cancers. Nmr in Biomedicine. e4166. PMID 31680360 DOI: 10.1002/Nbm.4166 |
0.476 |
|
| 2019 |
Mallavarapu T, Hao J, Kim Y, Oh JH, Kang M. Pathway-based Deep Clustering for Molecular Subtyping of Cancer. Methods (San Diego, Calif.). PMID 31247294 DOI: 10.1016/J.Ymeth.2019.06.017 |
0.523 |
|
| 2019 |
Zarepisheh M, Hong L, Zhou Y, Oh JH, Mechalakos JG, Margie HA, Mageras GS, Deasy JO. Automated intensity modulated treatment planning: the expedited constrained hierarchical optimization (ECHO) system. Medical Physics. PMID 31055858 DOI: 10.1002/Mp.13572 |
0.561 |
|
| 2019 |
Núñez DA, Lu Y, Paudyal R, Hatzoglou V, Moreira AL, Oh JH, Stambuk HE, Mazaheri Y, Gonen M, Ghossein RA, Shaha AR, Tuttle RM, Shukla-Dave A. Quantitative Non-Gaussian Intravoxel Incoherent Motion Diffusion-Weighted Imaging Metrics and Surgical Pathology for Stratifying Tumor Aggressiveness in Papillary Thyroid Carcinomas. Tomography (Ann Arbor, Mich.). 5: 26-35. PMID 30854439 DOI: 10.18383/j.tom.2018.00054 |
0.453 |
|
| 2019 |
Thakur SB, Horvat JV, Hancu I, Sutton OM, Bernard-Davila B, Weber M, Oh JH, Marino MA, Avendano D, Leithner D, Brennan S, Giri D, Manderski E, Morris EA, Pinker K. Quantitative in vivo proton MR spectroscopic assessment of lipid metabolism: Value for breast cancer diagnosis and prognosis. Journal of Magnetic Resonance Imaging : Jmri. PMID 30605266 DOI: 10.1002/Jmri.26622 |
0.441 |
|
| 2018 |
Gay HA, Oh JH, Apte AP, Daly MD, Adkins DR, Rich J, Oppelt PJ, Dyk PT, Mullen DF, Eschen L, Chin RI, Nussenbaum B, Haughey BH, Thorstad WL, Deasy JO. Predictors of acute throat or esophageal patient reported pain during radiation therapy for head and neck cancer. Clinical and Translational Radiation Oncology. 13: 1-6. PMID 30211324 DOI: 10.1016/J.Ctro.2018.08.004 |
0.576 |
|
| 2018 |
El Naqa I, Ruan D, Valdes G, Dekker A, McNutt T, Ge Y, Wu QJ, Oh JH, Thor M, Smith W, Rao A, Fuller C, Xiao Y, Manion F, Schipper M, et al. Machine learning and modeling: Data, validation, communication challenges. Medical Physics. PMID 30144098 DOI: 10.1002/Mp.12811 |
0.654 |
|
| 2018 |
Hatzoglou V, Oh JH, Buck O, Lin X, Lee M, Shukla-Dave A, Young RJ, Peck KK, Vachha B, Holodny AI, Grommes C. Pretreatment dynamic contrast-enhanced MRI biomarkers correlate with progression-free survival in primary central nervous system lymphoma. Journal of Neuro-Oncology. PMID 30073640 DOI: 10.1007/S11060-018-2960-Z |
0.467 |
|
| 2018 |
Kang J, Rancati T, Lee S, Oh JH, Kerns SL, Scott JG, Schwartz R, Kim S, Rosenstein BS. Machine Learning and Radiogenomics: Lessons Learned and Future Directions. Frontiers in Oncology. 8: 228. PMID 29977864 DOI: 10.3389/Fonc.2018.00228 |
0.516 |
|
| 2018 |
Apte AP, Iyer A, Crispin-Ortuzar M, Pandya R, van Dijk LV, Spezi E, Thor M, Um H, Veeraraghavan H, Oh JH, Shukla-Dave A, Deasy JO. Technical Note: Extension of CERR for computational radiomics: a comprehensive MATLAB platform for reproducible radiomics research. Medical Physics. PMID 29896896 DOI: 10.1002/Mp.13046 |
0.745 |
|
| 2018 |
Pouryahya M, Oh JH, Mathews JC, Deasy JO, Tannenbaum AR. Characterizing Cancer Drug Response and Biological Correlates: A Geometric Network Approach. Scientific Reports. 8: 6402. PMID 29686393 DOI: 10.1038/S41598-018-24679-3 |
0.756 |
|
| 2018 |
Munck Af Rosenschold P, Zelefsky MJ, Apte AP, Jackson A, Oh JH, Shulman E, Desai N, Hunt M, Ghadjar P, Yorke E, Deasy JO. Image-guided radiotherapy reduces the risk of under-dosing high-risk prostate cancer extra-capsular disease and improves biochemical control. Radiation Oncology (London, England). 13: 64. PMID 29650035 DOI: 10.1186/S13014-018-0978-1 |
0.594 |
|
| 2018 |
Lee S, Kerns S, Ostrer H, Rosenstein B, Deasy JO, Oh JH. Machine Learning on a Genome-wide Association Study to Predict Late Genitourinary Toxicity After Prostate Radiation Therapy. International Journal of Radiation Oncology, Biology, Physics. PMID 29502932 DOI: 10.1016/J.Ijrobp.2018.01.054 |
0.611 |
|
| 2018 |
Choi W, Oh JH, Riyahi S, Liu CJ, Jiang F, Chen W, White C, Rimner A, Mechalakos JG, Deasy JO, Lu W. Radiomics analysis of pulmonary nodules in low-dose CT for early detection of lung cancer. Medical Physics. PMID 29457229 DOI: 10.1002/Mp.12820 |
0.575 |
|
| 2018 |
Dean J, Wong K, Gay H, Welsh L, Jones AB, Schick U, Oh JH, Apte A, Newbold K, Bhide S, Harrington K, Deasy J, Nutting C, Gulliford S. Incorporating spatial dose metrics in machine learning-based normal tissue complication probability (NTCP) models of severe acute dysphagia resulting from head and neck radiotherapy. Clinical and Translational Radiation Oncology. 8: 27-39. PMID 29399642 DOI: 10.1016/J.Ctro.2017.11.009 |
0.607 |
|
| 2018 |
Dashevsky BZ, Oh JH, Apte AP, Bernard-Davila B, Morris EA, Deasy JO, Sutton EJ. MRI features predictive of negative surgical margins in patients with HER2 overexpressing breast cancer undergoing breast conservation. Scientific Reports. 8: 315. PMID 29321645 DOI: 10.1038/S41598-017-18758-0 |
0.579 |
|
| 2017 |
Zarayeneh N, Ko E, Oh JH, Suh S, Liu C, Gao J, Kim D, Kang M. Integration of multi-omics data for integrative gene regulatory network inference. International Journal of Data Mining and Bioinformatics. 18: 223-239. PMID 29354189 DOI: 10.1504/Ijdmb.2017.10008266 |
0.452 |
|
| 2017 |
Crispin-Ortuzar M, Apte A, Grkovski M, Oh JH, Lee NY, Schöder H, Humm JL, Deasy JO. Predicting hypoxia status using a combination of contrast-enhanced computed tomography and [18F]-Fluorodeoxyglucose positron emission tomography radiomics features. Radiotherapy and Oncology : Journal of the European Society For Therapeutic Radiology and Oncology. PMID 29273260 DOI: 10.1016/J.Radonc.2017.11.025 |
0.752 |
|
| 2017 |
Pommer T, Oh JH, Munck Af Rosenschöld P, Deasy JO. Simulating intrafraction prostate motion with a random walk model. Advances in Radiation Oncology. 2: 429-436. PMID 29114612 DOI: 10.1016/J.Adro.2017.03.005 |
0.57 |
|
| 2017 |
Taunk NK, Oh JH, Shukla-Dave A, Beal K, Vachha B, Holodny A, Hatzoglou V. Early Post-treatment Assessment of MRI Perfusion Biomarkers Can Predict Long-term Response of Lung Cancer Brain Metastases to Stereotactic Radiosurgery. Neuro-Oncology. PMID 29016814 DOI: 10.1093/Neuonc/Nox159 |
0.472 |
|
| 2017 |
Huang EX, Robinson CG, Molotievschi A, Bradley JD, Deasy JO, Oh JH. Independent test of a model to predict severe acute esophagitis. Advances in Radiation Oncology. 2: 37-43. PMID 28740914 DOI: 10.1016/J.Adro.2016.11.003 |
0.742 |
|
| 2017 |
Folkert MR, Setton J, Apte AP, Grkovski M, Young RJ, Schöder H, Thorstad WL, Lee NY, Deasy JO, Oh JH. Predictive modeling of outcomes following definitive chemoradiotherapy for oropharyngeal cancer based on FDG-PET image characteristics. Physics in Medicine and Biology. 62: 5327-5343. PMID 28604368 DOI: 10.1088/1361-6560/Aa73Cc |
0.61 |
|
| 2017 |
Jeong J, Oh JH, Sonke JJ, Belderbos JSA, Bradley JD, Fontanella AN, Rao SS, Deasy J. Modeling the Cellular Response of Lung Cancer to Radiation Therapy for a Broad Range of Fractionation Schedules. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 28539466 DOI: 10.1158/1078-0432.Ccr-16-3277 |
0.785 |
|
| 2017 |
Owosho AA, Thor M, Oh JH, Riaz N, Tsai CJ, Rosenberg H, Varthis S, Yom SH, Huryn JM, Lee NY, Deasy JO, Estilo CL. The role of parotid gland irradiation in the development of severe hyposalivation (xerostomia) after intensity-modulated radiation therapy for head and neck cancer: Temporal patterns, risk factors, and testing the QUANTEC guidelines. Journal of Cranio-Maxillo-Facial Surgery : Official Publication of the European Association For Cranio-Maxillo-Facial Surgery. PMID 28256385 DOI: 10.1016/J.Jcms.2017.01.020 |
0.711 |
|
| 2017 |
Oh JH, Kerns S, Ostrer H, Powell SN, Rosenstein B, Deasy JO. Computational methods using genome-wide association studies to predict radiotherapy complications and to identify correlative molecular processes. Scientific Reports. 7: 43381. PMID 28233873 DOI: 10.1038/Srep43381 |
0.617 |
|
| 2017 |
Steineck G, Skokic V, Sjöberg F, Bull C, Alevronta E, Dunberger G, Bergmark K, Wilderäng U, Oh JH, Deasy JO, Jörnsten R. Identifying radiation-induced survivorship syndromes affecting bowel health in a cohort of gynecological cancer survivors. Plos One. 12: e0171461. PMID 28158314 DOI: 10.1371/Journal.Pone.0171461 |
0.576 |
|
| 2016 |
Chen Y, Oh JH, Sandhu R, Lee S, Deasy JO, Tannenbaum A. Transcriptional Responses to Ultraviolet and Ionizing Radiation: An Approach Based on Graph Curvature. Proceedings. Ieee International Conference On Bioinformatics and Biomedicine. 2016: 1302-1306. PMID 28261534 DOI: 10.1109/BIBM.2016.7822706 |
0.586 |
|
| 2016 |
Tyagi N, Sutton E, Hunt M, Zhang J, Oh JH, Apte A, Mechalakos J, Wilgucki M, Gelb E, Mehrara B, Matros E, Ho A. Morphologic Features of Magnetic Resonance Imaging as a Surrogate of Capsular Contracture in Breast Cancer Patients With Implant-based Reconstructions. International Journal of Radiation Oncology, Biology, Physics. PMID 27986345 DOI: 10.1016/J.Ijrobp.2016.09.041 |
0.466 |
|
| 2016 |
Thor M, Owosho AA, Clark HD, Oh JH, Riaz N, Hovan A, Tsai J, Thomas SD, Yom SH, Wu JS, Huryn JM, Moiseenko V, Lee NY, Estilo CL, Deasy JO. Internal and external generalizability of temporal dose-response relationships for xerostomia following IMRT for head and neck cancer. Radiotherapy and Oncology : Journal of the European Society For Therapeutic Radiology and Oncology. PMID 27890427 DOI: 10.1016/J.Radonc.2016.11.005 |
0.713 |
|
| 2016 |
Paudyal R, Oh JH, Riaz N, Venigalla P, Li J, Hatzoglou V, Leeman J, Nunez DA, Lu Y, Deasy JO, Lee N, Shukla-Dave A. Intravoxel incoherent motion diffusion-weighted MRI during chemoradiation therapy to characterize and monitor treatment response in human papillomavirus head and neck squamous cell carcinoma. Journal of Magnetic Resonance Imaging : Jmri. PMID 27862553 DOI: 10.1002/Jmri.25523 |
0.552 |
|
| 2016 |
Dean JA, Wong KH, Gay H, Welsh LC, Jones AB, Schick U, Oh JH, Apte A, Newbold KL, Bhide SA, Harrington KJ, Deasy JO, Nutting CM, Gulliford SL. Functional Data Analysis Applied to Modeling of Severe Acute Mucositis and Dysphagia Resulting From Head and Neck Radiation Therapy. International Journal of Radiation Oncology, Biology, Physics. 96: 820-831. PMID 27788955 DOI: 10.1016/J.Ijrobp.2016.08.013 |
0.599 |
|
| 2016 |
Oh JH, Thor M, Olsson C, Skokic V, Jörnsten R, Alsadius D, Pettersson N, Steineck G, Deasy JO. A Factor Analysis Approach for Clustering Patient Reported Outcomes. Methods of Information in Medicine. 55. PMID 27588322 DOI: 10.3414/Me16-01-0035 |
0.707 |
|
| 2016 |
Hatzoglou V, Omuro AM, Haque S, Khakoo Y, Ganly I, Oh JH, Shukla-Dave A, Fatovic R, Gaal J, Holodny AI. Second-opinion interpretations of neuroimaging studies by oncologic neuroradiologists can help reduce errors in cancer care. Cancer. PMID 27219108 DOI: 10.1002/Cncr.30083 |
0.485 |
|
| 2016 |
Thor M, Olsson C, Oh JH, Petersen SE, Alsadius D, Bentzen L, Pettersson N, Muren LP, Høyer M, Steineck G, Deasy JO. Urinary bladder dose-response relationships for patient-reported genitourinary morbidity domains following prostate cancer radiotherapy. Radiotherapy and Oncology : Journal of the European Society For Therapeutic Radiology and Oncology. PMID 26879287 DOI: 10.1016/J.Radonc.2016.01.013 |
0.704 |
|
| 2016 |
Sutton EJ, Dashevsky BZ, Oh JH, Veeraraghavan H, Apte AP, Thakur SB, Morris EA, Deasy JO. Breast cancer molecular subtype classifier that incorporates MRI features. Journal of Magnetic Resonance Imaging : Jmri. PMID 26756416 DOI: 10.1002/Jmri.25119 |
0.576 |
|
| 2015 |
Michalak K, Maciak S, Kim YB, Santopietro G, Oh JH, Kang L, Garner HR, Michalak P. Nucleolar dominance and maternal control of 45S rDNA expression. Proceedings. Biological Sciences / the Royal Society. 282. PMID 26645200 DOI: 10.1098/Rspb.2015.2201 |
0.408 |
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| 2015 |
Thor M, Olsson CE, Oh JH, Alsadius D, Pettersson N, Deasy JO, Steineck G. Radiation Dose to the Penile Structures and Patient-Reported Sexual Dysfunction in Long-Term Prostate Cancer Survivors. The Journal of Sexual Medicine. PMID 26564611 DOI: 10.1111/Jsm.13031 |
0.705 |
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| 2015 |
Kerns SL, Kundu S, Oh JH, Singhal SK, Janelsins M, Travis LB, Deasy JO, Janssens AC, Ostrer H, Parliament M, Usmani N, Rosenstein BS. The Prediction of Radiotherapy Toxicity Using Single Nucleotide Polymorphism-Based Models: A Step Toward Prevention. Seminars in Radiation Oncology. 25: 281-91. PMID 26384276 DOI: 10.1016/J.Semradonc.2015.05.006 |
0.616 |
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| 2015 |
Thor M, Olsson CE, Oh JH, Petersen SE, Alsadius D, Bentzen L, Pettersson N, Muren LP, Waldenström AC, Høyer M, Steineck G, Deasy JO. Relationships between dose to the gastro-intestinal tract and patient-reported symptom domains after radiotherapy for localized prostate cancer. Acta Oncologica (Stockholm, Sweden). 54: 1326-34. PMID 26340136 DOI: 10.3109/0284186X.2015.1063779 |
0.707 |
|
| 2015 |
Oh JH, Deasy JO. A literature mining-based approach for identification of cellular pathways associated with chemoresistance in cancer. Briefings in Bioinformatics. PMID 26220932 DOI: 10.1093/Bib/Bbv053 |
0.589 |
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| 2015 |
Julie DA, Oh JH, Apte AP, Deasy JO, Tom A, Wu AJ, Goodman KA. Predictors of acute toxicities during definitive chemoradiation using intensity-modulated radiotherapy for anal squamous cell carcinoma. Acta Oncologica (Stockholm, Sweden). 1-9. PMID 25984929 DOI: 10.3109/0284186X.2015.1043396 |
0.569 |
|
| 2015 |
Son CH, Law E, Oh JH, Apte AP, Yang TJ, Riedel E, Wu AJ, Deasy JO, Goodman KA. Dosimetric Predictors of Radiation-Induced Vaginal Stenosis After Pelvic Radiation Therapy for Rectal and Anal Cancer. International Journal of Radiation Oncology, Biology, Physics. 92: 548-54. PMID 25936810 DOI: 10.1016/J.Ijrobp.2015.02.029 |
0.6 |
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| 2015 |
Sutton EJ, Oh JH, Dashevsky BZ, Veeraraghavan H, Apte AP, Thakur SB, Deasy JO, Morris EA. Breast cancer subtype intertumor heterogeneity: MRI-based features predict results of a genomic assay. Journal of Magnetic Resonance Imaging : Jmri. PMID 25850931 DOI: 10.1002/Jmri.24890 |
0.584 |
|
| 2015 |
Cella L, Oh JH, Deasy JO, Palma G, Liuzzi R, D'avino V, Conson M, Picardi M, Salvatore M, Pacelli R. Predicting radiation-induced valvular heart damage. Acta Oncologica (Stockholm, Sweden). 1-9. PMID 25800857 DOI: 10.3109/0284186X.2015.1016624 |
0.566 |
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| 2015 |
Folkert MR, Bilsky MH, Cohen GN, Voros L, Oh JH, Zaider M, Laufer I, Yamada Y. Local recurrence outcomes using the ³²P intraoperative brachytherapy plaque in the management of malignant lesions of the spine involving the dura. Brachytherapy. 14: 202-8. PMID 25483021 DOI: 10.1016/J.Brachy.2014.10.007 |
0.447 |
|
| 2014 |
Cella L, Palma G, Deasy JO, Oh JH, Liuzzi R, D'Avino V, Conson M, Pugliese N, Picardi M, Salvatore M, Pacelli R. Complication probability models for radiation-induced heart valvular dysfunction: do heart-lung interactions play a role? Plos One. 9: e111753. PMID 25360627 DOI: 10.1371/Journal.Pone.0111753 |
0.555 |
|
| 2014 |
Yang TJ, Oh JH, Apte A, Son CH, Deasy JO, Goodman KA. Clinical and dosimetric predictors of acute hematologic toxicity in rectal cancer patients undergoing chemoradiotherapy. Radiotherapy and Oncology : Journal of the European Society For Therapeutic Radiology and Oncology. 113: 29-34. PMID 25304718 DOI: 10.1016/J.Radonc.2014.09.002 |
0.591 |
|
| 2014 |
Yang TJ, Oh JH, Folkert MR, Gupta G, Shi W, Zhang Z, Morikawa A, Seidman A, Brennan C, Yamada Y, Chan TA, Beal K. Outcomes and prognostic factors in women with 1 to 3 breast cancer brain metastases treated with definitive stereotactic radiosurgery. International Journal of Radiation Oncology, Biology, Physics. 90: 518-25. PMID 25194669 DOI: 10.1016/J.Ijrobp.2014.06.063 |
0.48 |
|
| 2014 |
Oh JH, Deasy JO. Inference of radio-responsive gene regulatory networks using the graphical lasso algorithm. Bmc Bioinformatics. 15: S5. PMID 25077716 DOI: 10.1186/1471-2105-15-S7-S5 |
0.557 |
|
| 2014 |
Kim YB, Oh JH, McIver LJ, Rashkovetsky E, Michalak K, Garner HR, Kang L, Nevo E, Korol AB, Michalak P. Divergence of Drosophila melanogaster repeatomes in response to a sharp microclimate contrast in Evolution Canyon, Israel. Proceedings of the National Academy of Sciences of the United States of America. 111: 10630-5. PMID 25006263 DOI: 10.1073/Pnas.1410372111 |
0.412 |
|
| 2014 |
Rao SS, Oh JH, Jackson A, Deasy JO. Dose escalation, not “new biology,†can account for the efficacy of stereotactic body radiation therapy with non-small cell lung cancer. In regard to Brown et al. International Journal of Radiation Oncology, Biology, Physics. 89: 692-3. PMID 24929171 DOI: 10.1016/J.Ijrobp.2014.03.027 |
0.601 |
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| 2014 |
Jeong J, Setton JS, Lee NY, Oh JH, Deasy JO. Estimate of the impact of FDG-avidity on the dose required for head and neck radiotherapy local control. Radiotherapy and Oncology : Journal of the European Society For Therapeutic Radiology and Oncology. 111: 340-7. PMID 24833560 DOI: 10.1016/J.Radonc.2014.03.018 |
0.665 |
|
| 2014 |
Folkert MR, Bilsky MH, Tom AK, Oh JH, Alektiar KM, Laufer I, Tap WD, Yamada Y. Outcomes and toxicity for hypofractionated and single-fraction image-guided stereotactic radiosurgery for sarcomas metastasizing to the spine. International Journal of Radiation Oncology, Biology, Physics. 88: 1085-91. PMID 24661662 DOI: 10.1016/J.Ijrobp.2013.12.042 |
0.488 |
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| 2014 |
Munck af Rosenschöld P, Desai NB, Oh JH, Apte A, Hunt M, Kalikstein A, Mechalakos J, Happersett L, Deasy JO, Zelefsky MJ. Modeling positioning uncertainties of prostate cancer external beam radiation therapy using pre-treatment data. Radiotherapy and Oncology : Journal of the European Society For Therapeutic Radiology and Oncology. 110: 251-5. PMID 24560753 DOI: 10.1016/J.Radonc.2013.12.010 |
0.604 |
|
| 2014 |
Sveistrup J, af Rosenschöld PM, Deasy JO, Oh JH, Pommer T, Petersen PM, Engelholm SA. Improvement in toxicity in high risk prostate cancer patients treated with image-guided intensity-modulated radiotherapy compared to 3D conformal radiotherapy without daily image guidance. Radiation Oncology (London, England). 9: 44. PMID 24495815 DOI: 10.1186/1748-717X-9-44 |
0.608 |
|
| 2014 |
Oh JH, Deasy JO. SITDEM: a simulation tool for disease/endpoint models of association studies based on single nucleotide polymorphism genotypes. Computers in Biology and Medicine. 45: 136-42. PMID 24480173 DOI: 10.1016/J.Compbiomed.2013.11.021 |
0.55 |
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| 2014 |
Ghadjar P, Zelefsky MJ, Spratt DE, Munck af Rosenschöld P, Oh JH, Hunt M, Kollmeier M, Happersett L, Yorke E, Deasy JO, Jackson A. Impact of dose to the bladder trigone on long-term urinary function after high-dose intensity modulated radiation therapy for localized prostate cancer. International Journal of Radiation Oncology, Biology, Physics. 88: 339-44. PMID 24411606 DOI: 10.1016/J.Ijrobp.2013.10.042 |
0.609 |
|
| 2013 |
Hübner S, Rashkovetsky E, Kim YB, Oh JH, Michalak K, Weiner D, Korol AB, Nevo E, Michalak P. Genome differentiation of Drosophila melanogaster from a microclimate contrast in Evolution Canyon, Israel. Proceedings of the National Academy of Sciences of the United States of America. 110: 21059-64. PMID 24324170 DOI: 10.1073/Pnas.1321533111 |
0.43 |
|
| 2013 |
Yang TJ, Oh JH, Son CH, Apte A, Deasy JO, Wu A, Goodman KA. Predictors of acute gastrointestinal toxicity during pelvic chemoradiotherapy in patients with rectal cancer. Gastrointestinal Cancer Research : Gcr. 6: 129-36. PMID 24312686 |
0.594 |
|
| 2013 |
Ghadjar P, Jackson A, Spratt DE, Oh JH, Munck af Rosenschöld P, Kollmeier M, Yorke E, Hunt M, Deasy JO, Zelefsky MJ. Patterns and predictors of amelioration of genitourinary toxicity after high-dose intensity-modulated radiation therapy for localized prostate cancer: implications for defining postradiotherapy urinary toxicity. European Urology. 64: 931-8. PMID 23522772 DOI: 10.1016/J.Eururo.2013.02.001 |
0.604 |
|
| 2012 |
Oh JH, Wong HP, Wang X, Deasy JO. A bioinformatics filtering strategy for identifying radiation response biomarker candidates. Plos One. 7: e38870. PMID 22768051 DOI: 10.1371/Journal.Pone.0038870 |
0.588 |
|
| 2011 |
Oh JH, Craft J, Al Lozi R, Vaidya M, Meng Y, Deasy JO, Bradley JD, El Naqa I. A Bayesian network approach for modeling local failure in lung cancer. Physics in Medicine and Biology. 56: 1635-51. PMID 21335651 DOI: 10.1088/0031-9155/56/6/008 |
0.623 |
|
| 2011 |
Oh JH, Craft JM, Townsend R, Deasy JO, Bradley JD, El Naqa I. A bioinformatics approach for biomarker identification in radiation-induced lung inflammation from limited proteomics data. Journal of Proteome Research. 10: 1406-15. PMID 21226504 DOI: 10.1021/Pr101226Q |
0.607 |
|
| 2011 |
Oh JH, Gao J. Fast kernel discriminant analysis for classification of liver cancer mass spectra Ieee/Acm Transactions On Computational Biology and Bioinformatics. 8: 1522-1534. PMID 20479503 DOI: 10.1109/TCBB.2010.42 |
0.455 |
|
| 2010 |
Oh JH, Yang Y, El Naqa I. Adaptive learning for relevance feedback: application to digital mammography. Medical Physics. 37: 4432-44. PMID 20879602 DOI: 10.1118/1.3460839 |
0.429 |
|
| 2010 |
Oh JH, Pan S, Zhang J, Gao J. MSQ: A tool for quantification of proteomics data generated by a liquid chromatography/matrix-assisted laser desorption/ionization time-of-flight tandem mass spectrometry based targeted quantitative proteomics platform Rapid Communications in Mass Spectrometry. 24: 403-408. PMID 20069694 DOI: 10.1002/Rcm.4407 |
0.412 |
|
| 2009 |
Oh JH, Gao J. A kernel-based approach for detecting outliers of high-dimensional biological data. Bmc Bioinformatics. S7. PMID 19426455 DOI: 10.1186/1471-2105-10-S4-S7 |
0.431 |
|
| 2009 |
Oh JH, Lotan Y, Gurnani P, Rosenblatt KP, Gao J. Prostate cancer biomarker discovery using high performance mass spectral serum profiling Computer Methods and Programs in Biomedicine. 96: 33-41. PMID 19423179 DOI: 10.1016/j.cmpb.2009.04.003 |
0.474 |
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| 2009 |
Oh JH, Gurnani P, Schorge J, Rosenblatt KP, Gao JX. An extended Markov blanket approach to proteomic biomarker detection from high-resolution mass spectrometry data Ieee Transactions On Information Technology in Biomedicine. 13: 195-206. PMID 19126475 DOI: 10.1109/TITB.2008.2007909 |
0.459 |
|
| 2008 |
Oh JH, Kim YB, Gurnani P, Rosenblatt KP, Gao JX. Biomarker selection and sample prediction for multi-category disease on MALDI-TOF data Bioinformatics. 24: 1812-1818. PMID 18562269 DOI: 10.1093/bioinformatics/btn316 |
0.454 |
|
| 2006 |
Oh JH, Nandi A, Gurnani P, Knowles L, Schorge J, Rosenblatt KP, Gao JX. Proteomic biomarker identification for diagnosis of early relapse in ovarian cancer. Journal of Bioinformatics and Computational Biology. 4: 1159-79. PMID 17245808 DOI: 10.1142/S0219720006002399 |
0.463 |
|
| 2005 |
Oh JH, Gao J, Nandi A, Gurnani P, Knowles L, Schorge J. Diagnosis of early relapse in ovarian cancer using serum proteomic profiling. Genome Informatics. International Conference On Genome Informatics. 16: 195-204. PMID 16901102 |
0.458 |
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