Thomas Preiss - Publications

Affiliations: 
John Curtains School of Medical Research Australian National University, Acton, Australian Capital Territory, Australia 

39 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Ortiz-Barahona V, Soler M, Davalos V, García-Prieto CA, Janin M, Setien F, Fernández-Rebollo I, Bech-Serra JJ, De La Torre C, Guil S, Villanueva A, Zhang PH, Yang L, Guarnacci M, Schumann U, ... Preiss T, et al. Epigenetic inactivation of the 5-methylcytosine RNA methyltransferase NSUN7 is associated with clinical outcome and therapeutic vulnerability in liver cancer. Molecular Cancer. 22: 83. PMID 37173708 DOI: 10.1186/s12943-023-01785-z  0.413
2022 Wagner S, Bohlen J, Herrmannova A, Jelínek J, Preiss T, Valášek LS, Teleman AA. Selective footprinting of 40S and 80S ribosome subpopulations (Sel-TCP-seq) to study translation and its control. Nature Protocols. PMID 35869369 DOI: 10.1038/s41596-022-00708-4  0.51
2022 Sibbritt T, Schumann U, Shafik A, Guarnacci M, Clark SJ, Preiss T. Target-Specific Profiling of RNA mC Methylation Level Using Amplicon Sequencing. Methods in Molecular Biology (Clifton, N.J.). 2404: 375-392. PMID 34694621 DOI: 10.1007/978-1-0716-1851-6_21  0.531
2020 Wagner S, Herrmannová A, Hronová V, Gunišová S, Sen ND, Hannan RD, Hinnebusch AG, Shirokikh NE, Preiss T, Valášek LS. Selective Translation Complex Profiling Reveals Staged Initiation and Co-translational Assembly of Initiation Factor Complexes. Molecular Cell. PMID 32589964 DOI: 10.1016/J.Molcel.2020.06.004  0.408
2019 Swaminathan A, Harrison PF, Preiss T, Beilharz TH. PAT-Seq: A Method for Simultaneous Quantitation of Gene Expression, Poly(A)-Site Selection and Poly(A)-Length Distribution in Yeast Transcriptomes. Methods in Molecular Biology (Clifton, N.J.). 2049: 141-164. PMID 31602610 DOI: 10.1007/978-1-4939-9736-7_9  0.634
2019 Janin M, Ortiz-Barahona V, de Moura MC, Martínez-Cardús A, Llinàs-Arias P, Soler M, Nachmani D, Pelletier J, Schumann U, Calleja-Cervantes ME, Moran S, Guil S, Bueno-Costa A, Piñeyro D, Perez-Salvia M, ... ... Preiss T, et al. Epigenetic loss of RNA-methyltransferase NSUN5 in glioma targets ribosomes to drive a stress adaptive translational program. Acta Neuropathologica. PMID 31428936 DOI: 10.1007/S00401-019-02062-4  0.367
2019 Sen ND, Gupta N, K Archer S, Preiss T, Lorsch JR, Hinnebusch AG. Functional interplay between DEAD-box RNA helicases Ded1 and Dbp1 in preinitiation complex attachment and scanning on structured mRNAs in vivo. Nucleic Acids Research. PMID 31299079 DOI: 10.1093/Nar/Gkz595  0.637
2018 Faunce T, Ray A, Gardiner C, Preiss T, Burgio G. Regulating RNA Research and CRISPR Gene Drives to Combat Biosecurity Threats. Journal of Law and Medicine. 26: 208-213. PMID 30302983  0.392
2018 Hentze MW, Castello A, Schwarzl T, Preiss T. A brave new world of RNA-binding proteins. Nature Reviews. Molecular Cell Biology. PMID 29339797 DOI: 10.1038/Nrm.2017.130  0.471
2017 Shirokikh NE, Archer SK, Beilharz TH, Powell D, Preiss T. Translation complex profile sequencing to study the in vivo dynamics of mRNA-ribosome interactions during translation initiation, elongation and termination. Nature Protocols. 12: 697-731. PMID 28253237 DOI: 10.1038/nprot.2016.189  0.624
2017 David R, Burgess A, Parker B, Li J, Pulsford K, Sibbritt T, Preiss T, Searle IR. Transcriptome-wide Mapping of RNA 5-Methylcytosine in Arabidopsis mRNAs and non-coding RNAs. The Plant Cell. PMID 28062751 DOI: 10.1105/tpc.16.00751  0.608
2016 Reichel M, Liao Y, Rettel M, Ragan C, Evers M, Alleaume AM, Horos R, Hentze MW, Preiss T, Millar AA. In planta determination of the mRNA-binding proteome of Arabidopsis etiolated seedlings. The Plant Cell. PMID 27729395 DOI: 10.1105/Tpc.16.00562  0.443
2016 Liao Y, Castello A, Fischer B, Leicht S, Föehr S, Frese CK, Ragan C, Kurscheid S, Pagler E, Yang H, Krijgsveld J, Hentze MW, Preiss T. The Cardiomyocyte RNA-Binding Proteome: Links to Intermediary Metabolism and Heart Disease. Cell Reports. PMID 27452465 DOI: 10.1016/J.Celrep.2016.06.084  0.529
2016 Singhania R, Pavey S, Payne E, Gu W, Clancy J, Jubair L, Preiss T, Saunders N, McMillan NA. Short interfering RNA induced generation and translation of stable 5' mRNA cleavage intermediates. Biochimica Et Biophysica Acta. PMID 27321990 DOI: 10.1016/j.bbagrm.2016.06.005  0.677
2016 Liepelt A, Naarmann-de Vries IS, Simons N, Eichelbaum K, Foehr S, Archer SK, Castello A, Usadel B, Krijgsveld J, Preiss T, Marx G, Hentze MW, Ostareck DH, Ostareck-Lederer A. Identification of RNA-binding proteins in macrophages by interactome capture. Molecular & Cellular Proteomics : McP. PMID 27281784 DOI: 10.1074/Mcp.M115.056564  0.382
2016 Wong QW, Vaz C, Lee QY, Zhao TY, Luo R, Archer SK, Preiss T, Tanavde V, Vardy LA. Embryonic Stem Cells Exhibit mRNA Isoform Specific Translational Regulation. Plos One. 11: e0143235. PMID 26799392 DOI: 10.1371/journal.pone.0143235  0.624
2016 Sibbritt T, Shafik A, Clark SJ, Preiss T. Nucleotide-Level Profiling of m(5)C RNA Methylation. Methods in Molecular Biology (Clifton, N.J.). 1358: 269-84. PMID 26463389 DOI: 10.1007/978-1-4939-3067-8_16  0.448
2015 Castello A, Hentze MW, Preiss T. Metabolic Enzymes Enjoying New Partnerships as RNA-Binding Proteins. Trends in Endocrinology and Metabolism: Tem. 26: 746-57. PMID 26520658 DOI: 10.1016/J.Tem.2015.09.012  0.312
2015 Harrison PF, Powell DR, Clancy JL, Preiss T, Boag PR, Traven A, Seemann T, Beilharz TH. PAT-seq: a method to study the integration of 3'-UTR dynamics with gene expression in the eukaryotic transcriptome. Rna (New York, N.Y.). 21: 1502-10. PMID 26092945 DOI: 10.1261/rna.048355.114  0.528
2015 Archer SK, Shirokikh NE, Preiss T. Probe-Directed Degradation (PDD) for Flexible Removal of Unwanted cDNA Sequences from RNA-Seq Libraries. Current Protocols in Human Genetics / Editorial Board, Jonathan L. Haines ... [Et Al.]. 85: 11.15.1-11.15.36. PMID 25827346 DOI: 10.1002/0471142905.hg1115s85  0.455
2015 Archer SK, Shirokikh NE, Hallwirth CV, Beilharz TH, Preiss T. "Probing the closed-loop model of mRNA translation in living cells". Rna Biology. 12: 248-54. PMID 25826658 DOI: 10.1080/15476286.2015.1017242  0.487
2015 Srivastava M, Duan G, Kershaw NJ, Athanasopoulos V, Yeo JH, Ose T, Hu D, Brown SH, Jergic S, Patel HR, Pratama A, Richards S, Verma A, Jones EY, Heissmeyer V, ... Preiss T, et al. Roquin binds microRNA-146a and Argonaute2 to regulate microRNA homeostasis. Nature Communications. 6: 6253. PMID 25697406 DOI: 10.1038/Ncomms7253  0.339
2014 Archer SK, Shirokikh NE, Preiss T. Selective and flexible depletion of problematic sequences from RNA-seq libraries at the cDNA stage. Bmc Genomics. 15: 401. PMID 24886553 DOI: 10.1186/1471-2164-15-401  0.459
2014 Murat P, Zhong J, Lekieffre L, Cowieson NP, Clancy JL, Preiss T, Balasubramanian S, Khanna R, Tellam J. G-quadruplexes regulate Epstein-Barr virus-encoded nuclear antigen 1 mRNA translation. Nature Chemical Biology. 10: 358-64. PMID 24633353 DOI: 10.1038/Nchembio.1479  0.416
2013 Castello A, Fischer B, Hentze MW, Preiss T. RNA-binding proteins in Mendelian disease. Trends in Genetics : Tig. 29: 318-27. PMID 23415593 DOI: 10.1016/J.Tig.2013.01.004  0.488
2012 Gebauer F, Preiss T, Hentze MW. From cis-regulatory elements to complex RNPs and back. Cold Spring Harbor Perspectives in Biology. 4: a012245. PMID 22751153 DOI: 10.1101/Cshperspect.A012245  0.486
2012 Hernández G, Proud CG, Preiss T, Parsyan A. On the Diversification of the Translation Apparatus across Eukaryotes. Comparative and Functional Genomics. 2012: 256848. PMID 22666084 DOI: 10.1155/2012/256848  0.462
2012 Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J, Hentze MW. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. Cell. 149: 1393-406. PMID 22658674 DOI: 10.1016/J.Cell.2012.04.031  0.596
2012 Squires JE, Patel HR, Nousch M, Sibbritt T, Humphreys DT, Parker BJ, Suter CM, Preiss T. Widespread occurrence of 5-methylcytosine in human coding and non-coding RNA. Nucleic Acids Research. 40: 5023-33. PMID 22344696 DOI: 10.1093/nar/gks144  0.597
2011 Clancy JL, Wei GH, Echner N, Humphreys DT, Beilharz TH, Preiss T. mRNA isoform diversity can obscure detection of miRNA-mediated control of translation. Rna (New York, N.Y.). 17: 1025-31. PMID 21467217 DOI: 10.1261/rna.2567611  0.342
2010 Hentze MW, Preiss T. The REM phase of gene regulation. Trends in Biochemical Sciences. 35: 423-6. PMID 20554447 DOI: 10.1016/J.Tibs.2010.05.009  0.374
2010 Beilharz TH, Humphreys DT, Preiss T. miRNA Effects on mRNA closed-loop formation during translation initiation. Progress in Molecular and Subcellular Biology. 50: 99-112. PMID 19841884 DOI: 10.1007/978-3-642-03103-8_7  0.344
2009 Beilharz TH, Humphreys DT, Clancy JL, Thermann R, Martin DI, Hentze MW, Preiss T. microRNA-mediated messenger RNA deadenylation contributes to translational repression in mammalian cells. Plos One. 4: e6783. PMID 19710908 DOI: 10.1371/Journal.Pone.0006783  0.494
2007 Lackner DH, Beilharz TH, Marguerat S, Mata J, Watt S, Schubert F, Preiss T, Bähler J. A network of multiple regulatory layers shapes gene expression in fission yeast. Molecular Cell. 26: 145-55. PMID 17434133 DOI: 10.1016/J.Molcel.2007.03.002  0.47
2005 Humphreys DT, Westman BJ, Martin DI, Preiss T. MicroRNAs control translation initiation by inhibiting eukaryotic initiation factor 4E/cap and poly(A) tail function. Proceedings of the National Academy of Sciences of the United States of America. 102: 16961-6. PMID 16287976 DOI: 10.1073/pnas.0506482102  0.362
2005 Westman B, Beeren L, Grudzien E, Stepinski J, Worch R, Zuberek J, Jemielity J, Stolarski R, Darzynkiewicz E, Rhoads RE, Preiss T. The antiviral drug ribavirin does not mimic the 7-methylguanosine moiety of the mRNA cap structure in vitro. Rna (New York, N.Y.). 11: 1505-13. PMID 16131589 DOI: 10.1261/rna.2132505  0.474
2003 Preiss T, Hentze MW. Starting the protein synthesis machine: eukaryotic translation initiation. Bioessays. 25: 1201-1211. PMID 14635255 DOI: 10.1002/Bies.10362  0.402
2003 Preiss T, Baron-Benhamou J, Ansorge W, Hentze MW. Homodirectional changes in transcriptome composition and mRNA translation induced by rapamycin and heat shock. Nature Structural & Molecular Biology. 10: 1039-1047. PMID 14608375 DOI: 10.1038/Nsb1015  0.477
2003 Baron-Benhamou J, Fortes P, Inada T, Preiss T, Hentze MW. The interaction of the cap-binding complex (CBC) with eIF4G is dispensable for translation in yeast. Rna. 9: 654-662. PMID 12756324 DOI: 10.1261/Rna.5100903  0.48
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