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Ghanim Ullah - Publications

Affiliations: 
2006 Ohio University, Athens, OH, United States 
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51 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Adeoye T, Shah SI, Ullah G. Systematic Analysis of Biological Processes Reveals Gene Co-expression Modules Driving Pathway Dysregulation in Alzheimer's Disease. Biorxiv : the Preprint Server For Biology. PMID 38559218 DOI: 10.1101/2024.03.15.585267  0.739
2022 Adeoye T, Shah SI, Demuro A, Rabson DA, Ullah G. Upregulated Ca Release from the Endoplasmic Reticulum Leads to Impaired Presynaptic Function in Familial Alzheimer's Disease. Cells. 11. PMID 35883609 DOI: 10.3390/cells11142167  0.744
2020 Perez C, Felix L, Durry S, Rose CR, Ullah G. On the Origin of Ultraslow Spontaneous Na Fluctuations in Neurons of the Neonatal Forebrain. Journal of Neurophysiology. PMID 33236936 DOI: 10.1152/jn.00373.2020  0.377
2020 Shah SI, Ullah G. The Function of Mitochondrial Calcium Uniporter at the Whole-Cell and Single Mitochondrion Levels in WT, MICU1 KO, and MICU2 KO Cells. Cells. 9. PMID 32580385 DOI: 10.3390/Cells9061520  0.345
2020 Shah SI, Ong HL, Demuro A, Ullah G. PunctaSpecks: A tool for automated detection, tracking, and analysis of multiple types of fluorescently labeled biomolecules. Cell Calcium. 89: 102224. PMID 32502904 DOI: 10.1016/J.Ceca.2020.102224  0.334
2020 Shah SI, Parker I, Demuro A, Ullah G. Data Driven Modeling of Alzheimer's Disease Associated Beta Amyloid Pores Hints Towards Progressive Ca2+-Induced Cell Toxicity Biophysical Journal. 118: 564a. DOI: 10.1016/J.Bpj.2019.11.3076  0.307
2019 Toglia P, Ullah G. Mitochondrial dysfunction and role in spreading depolarization and seizure. Journal of Computational Neuroscience. PMID 31506806 DOI: 10.1007/S10827-019-00724-6  0.427
2018 Shah SI, Smith M, Swaminathan D, Parker I, Ullah G, Demuro A. CellSpecks: A Software for Automated Detection and Analysis of Calcium Channels in Live Cells. Biophysical Journal. PMID 30447989 DOI: 10.1016/J.Bpj.2018.10.015  0.698
2018 Toglia P, Demuro A, Mak DD, Ullah G. Data-driven modeling of mitochondrial dysfunction in Alzheimer's disease. Cell Calcium. 76: 23-35. PMID 30248575 DOI: 10.1016/J.Ceca.2018.09.003  0.372
2018 Shah SI, Demuro A, Mak DD, Parker I, Pearson JE, Ullah G. TraceSpecks: A Software for Automated Idealization of Noisy Patch-Clamp and Imaging Data. Biophysical Journal. 115: 9-21. PMID 29972815 DOI: 10.1016/J.Bpj.2018.06.003  0.332
2018 Perez C, Ullah G. Reduced cooperativity of voltage-gated sodium channels in the hippocampal interneurons of an aged mouse model of Alzheimer's disease. European Biophysics Journal : Ebj. PMID 29427204 DOI: 10.1007/S00249-017-1274-Y  0.355
2017 Toglia P, Ullah G, Pearson JE. Analyzing optical imaging of Ca(2+) signals via TIRF microscopy: The limits on resolution due to chemical rates and depth of the channels. Cell Calcium. 67: 65-73. PMID 29029792 DOI: 10.1016/j.ceca.2017.08.010  0.334
2017 Hübel N, Hosseini-Zare MS, Žiburkus J, Ullah G. The role of glutamate in neuronal ion homeostasis: A case study of spreading depolarization. Plos Computational Biology. 13: e1005804. PMID 29023523 DOI: 10.1371/Journal.Pcbi.1005804  0.762
2016 Perez C, Ziburkus J, Ullah G. Analyzing and Modeling the Dysfunction of Inhibitory Neurons in Alzheimer's Disease. Plos One. 11: e0168800. PMID 28036398 DOI: 10.1371/Journal.Pone.0168800  0.761
2016 Toglia P, Ullah G. The gain-of-function enhancement of IP3-receptor channel gating by familial Alzheimer's disease-linked presenilin mutants increases the open probability of mitochondrial permeability transition pore. Cell Calcium. PMID 27184076 DOI: 10.1016/J.Ceca.2016.05.002  0.365
2016 Ullah G, Ullah A. Mode switching of Inositol 1,4,5-trisphosphate receptor channel shapes the Spatiotemporal scales of Ca(2+) signals. Journal of Biological Physics. PMID 27154029 DOI: 10.1007/S10867-016-9419-2  0.526
2016 Hübel N, Ullah G. Anions Govern Cell Volume: A Case Study of Relative Astrocytic and Neuronal Swelling in Spreading Depolarization. Plos One. 11: e0147060. PMID 26974767 DOI: 10.1371/Journal.Pone.0147060  0.462
2016 Hübel N, Andrew RD, Ullah G. Large extracellular space leads to neuronal susceptibility to ischemic injury in a Na(+)/K (+) pumps-dependent manner. Journal of Computational Neuroscience. PMID 26852334 DOI: 10.1007/S10827-016-0591-Y  0.36
2016 Ullah G, Wei Y, Schiff SJ. A Unified Framework for Neuronal Spikes, Seizures, Spreading Depression, and Ischemia-Induced Anoxic Depolarization Biophysical Journal. 110: 632a. DOI: 10.1016/J.Bpj.2015.11.3383  0.791
2015 Mak DO, Cheung KH, Toglia P, Foskett JK, Ullah G. Analyzing and Quantifying the Gain-of-Function Enhancement of IP3 Receptor Gating by Familial Alzheimer's Disease-Causing Mutants in Presenilins. Plos Computational Biology. 11: e1004529. PMID 26439382 DOI: 10.1371/Journal.Pcbi.1004529  0.348
2015 Ullah G, Demuro A, Parker I, Pearson JE. Analyzing and Modeling the Kinetics of Amyloid Beta Pores Associated with Alzheimer's Disease Pathology. Plos One. 10: e0137357. PMID 26348728 DOI: 10.1371/Journal.Pone.0137357  0.379
2015 Ullah G, Wei Y, Dahlem MA, Wechselberger M, Schiff SJ. The Role of Cell Volume in the Dynamics of Seizure, Spreading Depression, and Anoxic Depolarization. Plos Computational Biology. 11: e1004414. PMID 26273829 DOI: 10.1371/Journal.Pcbi.1004414  0.8
2014 Wei Y, Ullah G, Schiff SJ. Unification of neuronal spikes, seizures, and spreading depression. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 34: 11733-43. PMID 25164668 DOI: 10.1523/Jneurosci.0516-14.2014  0.797
2014 Wei Y, Ullah G, Ingram J, Schiff SJ. Oxygen and seizure dynamics: II. Computational modeling. Journal of Neurophysiology. 112: 213-23. PMID 24671540 DOI: 10.1152/Jn.00541.2013  0.783
2014 Ullah A, Jung P, Ullah G, Machaca K. The role of IP3 receptor channel clustering in Ca2+ wave propagation during oocyte maturation. Progress in Molecular Biology and Translational Science. 123: 83-101. PMID 24560141 DOI: 10.1016/B978-0-12-397897-4.00006-1  0.626
2014 Ullah G, Demuro A, Parker I, Pearson JE. Learning the Kinetics of Amyloid β Pore in Alzheimer's Disease Pathology Biophysical Journal. 106: 548a. DOI: 10.1016/J.Bpj.2013.11.3052  0.372
2014 Ullah A, Jung P, Ullah G, Machaca K. The role of IP3 Receptor channel clustering in Ca2 + wave propagation during oocyte maturation Progress in Molecular Biology and Translational Science. 123: 83-101. DOI: 10.1016/B978-0-12-397897-400006-1  0.566
2013 Bruno WJ, Ullah G, Mak DO, Pearson JE. Automated maximum likelihood separation of signal from baseline in noisy quantal data. Biophysical Journal. 105: 68-79. PMID 23823225 DOI: 10.1016/J.Bpj.2013.02.060  0.32
2012 Vais H, Foskett JK, Ullah G, Pearson JE, Mak DO. Permeant calcium ion feed-through regulation of single inositol 1,4,5-trisphosphate receptor channel gating. The Journal of General Physiology. 140: 697-716. PMID 23148262 DOI: 10.1085/Jgp.201210804  0.339
2012 Ullah G, Mak DO, Pearson JE. A data-driven model of a modal gated ion channel: the inositol 1,4,5-trisphosphate receptor in insect Sf9 cells. The Journal of General Physiology. 140: 159-73. PMID 22851676 DOI: 10.1085/Jgp.201110753  0.33
2012 Ullah G, Parker I, Mak DO, Pearson JE. Multi-scale data-driven modeling and observation of calcium puffs. Cell Calcium. 52: 152-60. PMID 22682010 DOI: 10.1016/J.Ceca.2012.04.018  0.381
2012 Wei Y, Ullah G, Ingram J, Schiff S. Oxygen dynamics during in vitro seizures Bmc Neuroscience. 13. DOI: 10.1186/1471-2202-13-S1-O20  0.789
2012 Ullah G, Mak DD, Pearson JE. A Data Driven Approach to Learning the Kinetics of Single Molecules: A Case Study of Single Inositol 1,4,5-Trisphosphate Receptor Channel Biophysical Journal. 102: 110a. DOI: 10.1016/J.Bpj.2011.11.620  0.318
2011 Wei Y, Ullah G, Parekh R, Ziburkus J, Schiff SJ. Kalman filter tracking of intracellular neuronal voltage and current Proceedings of the Ieee Conference On Decision and Control. 5844-5849. DOI: 10.1109/CDC.2011.6161358  0.756
2011 Cressman JR, Ullah G, Ziburkus J, Schiff SJ, Barreto E. Erratum to: The influence of sodium and potassium dynamics on excitability, seizures, and the stability of persistent states: I. Single neuron dynamics Journal of Computational Neuroscience. 30: 781-781. DOI: 10.1007/S10827-011-0333-0  0.562
2010 Ullah G, Schiff SJ. Assimilating seizure dynamics. Plos Computational Biology. 6: e1000776. PMID 20463875 DOI: 10.1371/Journal.Pcbi.1000776  0.651
2010 Ullah G, Schiff SJ. Tracking neuronal dynamics during seizures Bmc Neuroscience. 11. DOI: 10.1186/1471-2202-11-S1-O9  0.67
2010 Swaminathan D, Ullah G, Jung P. Erratum: “A simple sequential-binding model for calcium puffs” [Chaos 19, 037109 (2009)] Chaos: An Interdisciplinary Journal of Nonlinear Science. 20: 019901. DOI: 10.1063/1.3274224  0.637
2009 Swaminathan D, Ullah G, Jung P. A simple sequential-binding model for calcium puffs. Chaos (Woodbury, N.Y.). 19: 037109. PMID 19792034 DOI: 10.1063/1.3152227  0.734
2009 Ullah G, Schiff SJ. Tracking and control of neuronal Hodgkin-Huxley dynamics. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 79: 040901. PMID 19518166 DOI: 10.1103/Physreve.79.040901  0.625
2009 Cressman JR, Ullah G, Ziburkus J, Schiff SJ, Barreto E. The influence of sodium and potassium dynamics on excitability, seizures, and the stability of persistent states: I. Single neuron dynamics. Journal of Computational Neuroscience. 26: 159-70. PMID 19169801 DOI: 10.1007/S10827-008-0132-4  0.781
2009 Ullah G, Cressman JR, Barreto E, Schiff SJ. The influence of sodium and potassium dynamics on excitability, seizures, and the stability of persistent states. II. Network and glial dynamics. Journal of Computational Neuroscience. 26: 171-83. PMID 19083088 DOI: 10.1007/S10827-008-0130-6  0.798
2009 Ullah G, Schiff S. Models of epilepsy Scholarpedia. 4: 1409. DOI: 10.4249/Scholarpedia.1409  0.576
2008 Ullah G, Cressman JR, Schiff SJ. Modeling the interplay between interneuron and pyramidal cell during seizures Bmc Neuroscience. 9. DOI: 10.1186/1471-2202-9-S1-P145  0.601
2008 Cressman J, Ullah G, Ziburkus J, Schiff S, Barreto E. Ion concentration dynamics: mechanisms for bursting and seizing Bmc Neuroscience. 9: 1-1. DOI: 10.1186/1471-2202-9-S1-O9  0.503
2007 Ullah G, Jung P, Machaca K. Modeling Ca2+ signaling differentiation during oocyte maturation. Cell Calcium. 42: 556-64. PMID 17349690 DOI: 10.1016/J.Ceca.2007.01.010  0.547
2007 Cressman R, Ullah G, Ziburkus J, Barreto E, Schiff SJ. Slow potassium dynamics and seizure evolution Bmc Neuroscience. 8. DOI: 10.1186/1471-2202-8-S2-P80  0.629
2007 Ullah G, Cressman JR, Barreto E, Schiff SJ. The role of glia in seizures Bmc Neuroscience. 8. DOI: 10.1186/1471-2202-8-S2-P28  0.642
2006 Ullah G, Jung P. Modeling the statistics of elementary calcium release events. Biophysical Journal. 90: 3485-95. PMID 16513779 DOI: 10.1529/Biophysj.105.073460  0.541
2006 Ullah G, Jung P, Cornell-Bell AH. Anti-phase calcium oscillations in astrocytes via inositol (1, 4, 5)-trisphosphate regeneration. Cell Calcium. 39: 197-208. PMID 16330095 DOI: 10.1016/J.Ceca.2005.10.009  0.508
2005 Jung P, Neiman A, Afghan MKN, Nadkarni S, Ullah G. Thermal activation by power-limited coloured noise New Journal of Physics. 7. DOI: 10.1088/1367-2630/7/1/017  0.489
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