Year |
Citation |
Score |
2020 |
Rupakheti C, Lamoureux G, MacKerell AD, Roux B. Statistical mechanics of polarizable force fields based on classical Drude oscillators with dynamical propagation by the dual-thermostat extended Lagrangian. The Journal of Chemical Physics. 153: 114108. PMID 32962358 DOI: 10.1063/5.0019987 |
0.499 |
|
2020 |
Ozturk TN, Culham DE, Tempelhagen L, Wood JM, Lamoureux G. Salt-dependent Interactions Between the C-terminal Domain of Osmoregulatory Transporter ProP of and the Lipid Membrane. The Journal of Physical Chemistry. B. PMID 32838524 DOI: 10.1021/Acs.Jpcb.0C03935 |
0.353 |
|
2020 |
Blessing B, Trout C, Morales A, Rybacki K, Love SA, Lamoureux G, O'Malley SM, Hu X, Cruz DS. The Impact of Composition and Morphology on Ionic Conductivity of Silk/Cellulose Bio-Composites Fabricated from Ionic Liquid and Varying Percentages of Coagulation Agents. International Journal of Molecular Sciences. 21. PMID 32630158 DOI: 10.3390/Ijms21134695 |
0.303 |
|
2019 |
Orabi EA, Davis RL, Lamoureux G. Drude polarizable force field for cation-π interactions of alkali and quaternary ammonium ions with aromatic amino acid side chains. Journal of Computational Chemistry. PMID 31652004 DOI: 10.1002/Jcc.26084 |
0.396 |
|
2018 |
Culham DE, Marom D, Boutin R, Garner J, Ozturk TN, Sahtout N, Tempelhagen L, Lamoureux G, Wood JM. Dual Role of the C-Terminal Domain in Osmosensing by Bacterial Osmolyte Transporter ProP. Biophysical Journal. PMID 30448037 DOI: 10.1016/J.Bpj.2018.10.023 |
0.314 |
|
2018 |
Orabi EA, Lamoureux G. Cation-π Interactions Between Quaternary Ammonium Ions and Amino Acid Aromatic Groups in Aqueous Solution. The Journal of Physical Chemistry. B. PMID 29397727 DOI: 10.1021/Acs.Jpcb.7B11983 |
0.39 |
|
2017 |
Carabet LA, Guertin M, Lagüe P, Lamoureux G. Mechanism of the Nitric Oxide Dioxygenase Reaction of Mycobacterium tuberculosis Hemoglobin N. The Journal of Physical Chemistry. B. PMID 28835102 DOI: 10.1021/Acs.Jpcb.7B06494 |
0.589 |
|
2017 |
Ebert MCCJC, Guzman Espinola J, Lamoureux G, Pelletier JN. Substrate-Specific Screening for Mutational Hotspots Using Biased Molecular Dynamics Simulations Acs Catalysis. 7: 6786-6797. DOI: 10.1021/Acscatal.7B02634 |
0.305 |
|
2017 |
Ozturk TN, Lamoureux G. Molecular Modelling of Hexamer and Tetramer Forms of the Orai Calcium Channel Biophysical Journal. 112: 506a. DOI: 10.1016/J.Bpj.2016.11.2739 |
0.304 |
|
2016 |
Paz Ramos A, Lagüe P, Lamoureux G, Lafleur M. Effect of Saturated Very Long-Chain Fatty Acids on the Organization of Lipid Membranes: A Study Combining (2)H NMR Spectroscopy and Molecular Dynamics Simulations. The Journal of Physical Chemistry. B. PMID 27351151 DOI: 10.1021/Acs.Jpcb.6B04958 |
0.614 |
|
2015 |
Baday S, Orabi EA, Wang S, Lamoureux G, Bernèche S. Mechanism of NH4(+) Recruitment and NH3 Transport in Rh Proteins. Structure (London, England : 1993). 23: 1550-7. PMID 26190573 DOI: 10.1016/J.Str.2015.06.010 |
0.351 |
|
2015 |
Rhéault JF, Gagné È, Guertin M, Lamoureux G, Auger M, Lagüe P. Molecular model of hemoglobin N from Mycobacterium tuberculosis bound to lipid bilayers: a combined spectroscopic and computational study. Biochemistry. 54: 2073-84. PMID 25723781 DOI: 10.1021/Bi5010624 |
0.616 |
|
2014 |
Orabi EA, Lamoureux G. Simulation of Liquid and Supercritical Hydrogen Sulfide and of Alkali Ions in the Pure and Aqueous Liquid. Journal of Chemical Theory and Computation. 10: 3221-35. PMID 26588292 DOI: 10.1021/Ct5002335 |
0.379 |
|
2014 |
Wang S, MacKay L, Lamoureux G. Development of Semiempirical Models for Proton Transfer Reactions in Water. Journal of Chemical Theory and Computation. 10: 2881-90. PMID 26588263 DOI: 10.1021/Ct500164H |
0.33 |
|
2013 |
Orabi EA, Lamoureux G. Molecular Dynamics Investigation of Alkali Metal Ions in Liquid and Aqueous Ammonia. Journal of Chemical Theory and Computation. 9: 2324-38. PMID 26583725 DOI: 10.1021/Ct4001069 |
0.356 |
|
2013 |
Orabi EA, Lamoureux G. Polarizable Interaction Model for Liquid, Supercritical, and Aqueous Ammonia. Journal of Chemical Theory and Computation. 9: 2035-51. PMID 26583551 DOI: 10.1021/Ct301123J |
0.35 |
|
2013 |
Baday S, Wang S, Lamoureux G, Bernèche S. Different hydration patterns in the pores of AmtB and RhCG could determine their transport mechanisms. Biochemistry. 52: 7091-8. PMID 24021113 DOI: 10.1021/Bi400015F |
0.362 |
|
2013 |
Wang S, Orabi EA, Baday S, Bernèche S, Lamoureux G. Computational Investigation of Charge Transfer Mechanisms in Ammonium Transporters Biophysical Journal. 104: 285a. DOI: 10.1016/J.Bpj.2012.11.1597 |
0.351 |
|
2013 |
Baday S, Wang S, Lamoureux G, Bernèche S. Two Distinct Transport Mechanisms in AmtB and RhCG Proteins Biophysical Journal. 104: 285a. DOI: 10.1016/J.Bpj.2012.11.1596 |
0.366 |
|
2012 |
Orabi EA, Lamoureux G. Cation-π and π-π Interactions in Aqueous Solution Studied Using Polarizable Potential Models. Journal of Chemical Theory and Computation. 8: 182-93. PMID 26592880 DOI: 10.1021/Ct200569X |
0.384 |
|
2012 |
Wang S, Orabi EA, Baday S, Bernèche S, Lamoureux G. Ammonium transporters achieve charge transfer by fragmenting their substrate. Journal of the American Chemical Society. 134: 10419-27. PMID 22631217 DOI: 10.1021/Ja300129X |
0.332 |
|
2012 |
Lamoureux G, Orabi EA. Molecular modelling of cation-π interactions Molecular Simulation. 38: 704-722. DOI: 10.1080/08927022.2012.696640 |
0.364 |
|
2011 |
Baday S, Wang S, Lamoureux G, Bernèche S. Investigating Ammonium Transport Mechanisms in AmtB and RhCG by Molecular Dynamics Simulations Biophysical Journal. 100: 579a. DOI: 10.1016/J.Bpj.2010.12.3346 |
0.361 |
|
2011 |
Wang S, Baday S, Orabi EA, Bernèche S, Lamoureux G. Permeation Mechanism in the AmtB Ammonium Transporter: Putative Electrogenic Co-Transport of NH3 and H+ Biophysical Journal. 100: 579a. DOI: 10.1016/J.Bpj.2010.12.3345 |
0.359 |
|
2011 |
Wang S, Baday S, Bernèche S, Lamoureux G. Investigating Co-Transport Mechanisms in the AmtB Ammonium Transporter using QM/MM Molecular Dynamics Biophysical Journal. 100: 578a-579a. DOI: 10.1016/J.Bpj.2010.12.3344 |
0.343 |
|
2010 |
Lamoureux G, Javelle A, Baday S, Wang S, Bernèche S. Transport mechanisms in the ammonium transporter family. Transfusion Clinique Et Biologique : Journal De La SociéTé FrançAise De Transfusion Sanguine. 17: 168-75. PMID 20674437 DOI: 10.1016/J.Tracli.2010.06.004 |
0.344 |
|
2010 |
Yu H, Whitfield TW, Harder E, Lamoureux G, Vorobyov I, Anisimov VM, Mackerell AD, Roux B. Simulating Monovalent and Divalent Ions in Aqueous Solution Using a Drude Polarizable Force Field. Journal of Chemical Theory and Computation. 6: 774-786. PMID 20300554 DOI: 10.1021/Ct900576A |
0.58 |
|
2009 |
Lopes PE, Lamoureux G, Mackerell AD. Polarizable empirical force field for nitrogen-containing heteroaromatic compounds based on the classical Drude oscillator. Journal of Computational Chemistry. 30: 1821-38. PMID 19090564 DOI: 10.1002/Jcc.21183 |
0.333 |
|
2009 |
Lamoureux G, Faraldo-Gómez JD, Krupin S, Noskov SY. Polarizable model of chloroform based on classical Drude oscillators Chemical Physics Letters. 468: 270-274. DOI: 10.1016/J.Cplett.2008.12.002 |
0.595 |
|
2008 |
Blumberger J, Lamoureux G. Reorganization free energies and quantum corrections for a model electron self-exchange reaction: Comparison of polarizable and non-polarizable solvent models Molecular Physics. 106: 1597-1611. DOI: 10.1080/00268970802220112 |
0.369 |
|
2007 |
Blumberger J, Lamoureux G, Klein ML. Peptide Hydrolysis in Thermolysin: Ab Initio QM/MM Investigation of the Glu143-Assisted Water Addition Mechanism. Journal of Chemical Theory and Computation. 3: 1837-50. PMID 26627626 DOI: 10.1021/Ct7000792 |
0.349 |
|
2007 |
Whitfield TW, Varma S, Harder E, Lamoureux G, Rempe SB, Roux B. A theoretical study of aqueous solvation of K comparing ab initio, polarizable, and fixed-charge models. Journal of Chemical Theory and Computation. 3: 2068-2082. PMID 21785577 DOI: 10.1021/Ct700172B |
0.537 |
|
2007 |
Lopes PE, Lamoureux G, Roux B, Mackerell AD. Polarizable empirical force field for aromatic compounds based on the classical drude oscillator. The Journal of Physical Chemistry. B. 111: 2873-85. PMID 17388420 DOI: 10.1021/Jp0663614 |
0.485 |
|
2007 |
Lamoureux G, Klein ML, Bernèche S. A stable water chain in the hydrophobic pore of the AmtB ammonium transporter. Biophysical Journal. 92: L82-4. PMID 17351012 DOI: 10.1529/Biophysj.106.102756 |
0.366 |
|
2007 |
Dal Peraro M, Spiegel K, Lamoureux G, De Vivo M, DeGrado WF, Klein ML. Modeling the charge distribution at metal sites in proteins for molecular dynamics simulations. Journal of Structural Biology. 157: 444-53. PMID 17188512 DOI: 10.1016/J.Jsb.2006.10.019 |
0.349 |
|
2006 |
Lamoureux G, Roux B. Absolute hydration free energy scale for alkali and halide ions established from simulations with a polarizable force field. The Journal of Physical Chemistry. B. 110: 3308-22. PMID 16494345 DOI: 10.1021/Jp056043P |
0.509 |
|
2006 |
Lamoureux G, Harder E, Vorobyov IV, Roux B, MacKerell AD. A polarizable model of water for molecular dynamics simulations of biomolecules Chemical Physics Letters. 418: 245-249. DOI: 10.1016/J.Cplett.2005.10.135 |
0.533 |
|
2005 |
Anisimov VM, Lamoureux G, Vorobyov IV, Huang N, Roux B, MacKerell AD. Determination of Electrostatic Parameters for a Polarizable Force Field Based on the Classical Drude Oscillator. Journal of Chemical Theory and Computation. 1: 153-68. PMID 26641126 DOI: 10.1021/Ct049930P |
0.508 |
|
2005 |
Noskov SY, Lamoureux G, Roux B. Molecular dynamics study of hydration in ethanol-water mixtures using a polarizable force field. The Journal of Physical Chemistry. B. 109: 6705-13. PMID 16851754 DOI: 10.1021/Jp045438Q |
0.612 |
|
2005 |
Anisimov VM, Lamoureux G, Vorobyov IV, Huang N, Roux B, MacKerell AD. Determination of electrostatic parameters for a polarizable force field based on the classical Drude oscillator Journal of Chemical Theory and Computation. 1: 153-168. DOI: 10.1021/ct049930p |
0.379 |
|
2003 |
Lamoureux G, MacKerell AD, Roux B. A simple polarizable model of water based on classical drude oscillators Journal of Chemical Physics. 119: 5185-5197. DOI: 10.1063/1.1598191 |
0.516 |
|
2003 |
Lamoureux G, Roux B. Modeling induced polarization with classical Drude oscillators: Theory and molecular dynamics simulation algorithm Journal of Chemical Physics. 119: 3025-3039. DOI: 10.1063/1.1589749 |
0.504 |
|
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