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David M. Sturgill, Ph.D. - Publications

Affiliations: 
Biology University of Maryland, College Park, College Park, MD 
Area:
RNA splicing
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33/42 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Sebastian R, Hosogane EK, Sun EG, Tran AD, Reinhold WC, Burkett S, Sturgill DM, Gudla PR, Pommier Y, Aladjem MI, Oberdoerffer P. Epigenetic Regulation of DNA Repair Pathway Choice by MacroH2A1 Splice Variants Ensures Genome Stability. Molecular Cell. PMID 32649884 DOI: 10.1016/J.Molcel.2020.06.028  0.42
2020 Oberdoerffer S, Arango D, Hosogane M, Sturgill D, Yankova E, Kouzarides T, Tzelepis K. Acetylation of Cytidine in Messenger RNA Regulates Translation The Faseb Journal. 34: 1-1. DOI: 10.1096/Fasebj.2020.34.S1.00189  0.339
2019 Nanan KK, Sturgill DM, Prigge MF, Thenoz M, Dillman AA, Mandler MD, Oberdoerffer S. TET-Catalyzed 5-Carboxylcytosine Promotes CTCF Binding to Suboptimal Sequences Genome-wide. Iscience. 19: 326-339. PMID 31404833 DOI: 10.1016/J.Isci.2019.07.041  0.401
2019 Sawyer IA, Sturgill D, Dundr M. Membraneless nuclear organelles and the search for phases within phases. Wiley Interdisciplinary Reviews - Rna. 10. PMID 30362243 DOI: 10.1002/Wrna.1514  0.346
2018 Arango D, Sturgill D, Alhusaini N, Dillman AA, Sweet TJ, Hanson G, Hosogane M, Sinclair WR, Nanan KK, Mandler MD, Fox SD, Zengeya TT, Andresson T, Meier JL, Coller J, et al. Acetylation of Cytidine in mRNA Promotes Translation Efficiency. Cell. PMID 30449621 DOI: 10.1016/J.Cell.2018.10.030  0.304
2018 Nye J, Sturgill D, Athwal R, Dalal Y. HJURP antagonizes CENP-A mislocalization driven by the H3.3 chaperones HIRA and DAXX. Plos One. 13: e0205948. PMID 30365520 DOI: 10.1371/Journal.Pone.0205948  0.327
2017 Kim J, Sturgill D, Sebastian R, Khurana S, Tran AD, Edwards GB, Kruswick A, Burkett S, Hosogane EK, Hannon WW, Weyemi U, Bonner WM, Luger K, Oberdoerffer P. Replication Stress Shapes a Protective Chromatin Environment across Fragile Genomic Regions. Molecular Cell. PMID 29249653 DOI: 10.1016/J.Molcel.2017.11.021  0.307
2017 Nanan KK, Ocheltree C, Sturgill D, Mandler MD, Prigge M, Varma G, Oberdoerffer S. Independence between pre-mRNA splicing and DNA methylation in an isogenic minigene resource. Nucleic Acids Research. 45: 12780-12797. PMID 29244186 DOI: 10.1093/Nar/Gkx900  0.374
2016 Sawyer IA, Sturgill D, Sung MH, Hager GL, Dundr M. Cajal body function in genome organization and transcriptome diversity. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. PMID 27767214 DOI: 10.1002/Bies.201600144  0.44
2016 Vleurinck C, Raub S, Sturgill D, Oliver B, Beye M. Linking Genes and Brain Development of Honeybee Workers: A Whole-Transcriptome Approach. Plos One. 11: e0157980. PMID 27490820 DOI: 10.1371/Journal.Pone.0157980  0.37
2016 Quénet D, Sturgill D, Dalal Y. Identifying Centromeric RNAs Involved in Histone Dynamics In Vivo. Methods in Enzymology. 573: 445-66. PMID 27372766 DOI: 10.1016/Bs.Mie.2016.01.010  0.47
2016 Wang Q, Sawyer IA, Sung MH, Sturgill D, Shevtsov SP, Pegoraro G, Hakim O, Baek S, Hager GL, Dundr M. Cajal bodies are linked to genome conformation. Nature Communications. 7: 10966. PMID 26997247 DOI: 10.1038/Ncomms10966  0.48
2016 Marina RJ, Sturgill D, Bailly MA, Thenoz M, Varma G, Prigge MF, Nanan KK, Shukla S, Haque N, Oberdoerffer S. TET-catalyzed oxidation of intragenic 5-methylcytosine regulates CTCF-dependent alternative splicing. The Embo Journal. 35: 335-55. PMID 26711177 DOI: 10.15252/Embj.201593235  0.37
2015 Kim J, Sturgill D, Tran AD, Sinclair DA, Oberdoerffer P. Controlled DNA double-strand break induction in mice reveals post-damage transcriptome stability. Nucleic Acids Research. PMID 26687720 DOI: 10.1093/Nar/Gkv1482  0.389
2015 Sun X, Yang H, Sturgill D, Oliver B, Rabinow L, Samson ML. Sxl-Dependent, tra/tra2-Independent Alternative Splicing of the Drosophila melanogaster X-Linked Gene found in neurons. G3 (Bethesda, Md.). PMID 26511498 DOI: 10.1534/G3.115.023721  0.419
2014 Clough E, Jimenez E, Kim YA, Whitworth C, Neville MC, Hempel LU, Pavlou HJ, Chen ZX, Sturgill D, Dale RK, Smith HE, Przytycka TM, Goodwin SF, Van Doren M, Oliver B. Sex- and tissue-specific functions of Drosophila doublesex transcription factor target genes. Developmental Cell. 31: 761-73. PMID 25535918 DOI: 10.1016/J.Devcel.2014.11.021  0.355
2014 Chen ZX, Sturgill D, Qu J, Jiang H, Park S, Boley N, Suzuki AM, Fletcher AR, Plachetzki DC, FitzGerald PC, Artieri CG, Atallah J, Barmina O, Brown JB, Blankenburg KP, et al. Comparative validation of the D. melanogaster modENCODE transcriptome annotation. Genome Research. 24: 1209-23. PMID 24985915 DOI: 10.1101/Gr.159384.113  0.471
2014 Brown JB, Boley N, Eisman R, May GE, Stoiber MH, Duff MO, Booth BW, Wen J, Park S, Suzuki AM, Wan KH, Yu C, Zhang D, Carlson JW, Cherbas L, ... ... Sturgill D, et al. Diversity and dynamics of the Drosophila transcriptome. Nature. 512: 393-9. PMID 24670639 DOI: 10.1038/Nature12962  0.477
2013 Sturgill D, Malone JH, Sun X, Smith HE, Rabinow L, Samson ML, Oliver B. Design of RNA splicing analysis null models for post hoc filtering of Drosophila head RNA-Seq data with the splicing analysis kit (Spanki). Bmc Bioinformatics. 14: 320. PMID 24209455 DOI: 10.1186/1471-2105-14-320  0.384
2011 Deng X, Hiatt JB, Nguyen DK, Ercan S, Sturgill D, Hillier LW, Schlesinger F, Davis CA, Reinke VJ, Gingeras TR, Shendure J, Waterston RH, Oliver B, Lieb JD, Disteche CM. Evidence for compensatory upregulation of expressed X-linked genes in mammals, Caenorhabditis elegans and Drosophila melanogaster. Nature Genetics. 43: 1179-85. PMID 22019781 DOI: 10.1038/Ng.948  0.441
2011 Graveley BR, Brooks AN, Carlson JW, Duff MO, Landolin JM, Yang L, Artieri CG, van Baren MJ, Boley N, Booth BW, Brown JB, Cherbas L, Davis CA, Dobin A, Li R, ... ... Sturgill D, et al. The developmental transcriptome of Drosophila melanogaster. Nature. 471: 473-9. PMID 21179090 DOI: 10.1038/Nature09715  0.5
2010 Roy S, Ernst J, Kharchenko PV, Kheradpour P, Negre N, Eaton ML, Landolin JM, Bristow CA, Ma L, Lin MF, Washietl S, Arshinoff BI, Ay F, Meyer PE, ... ... Sturgill D, et al. Identification of functional elements and regulatory circuits by Drosophila modENCODE. Science (New York, N.Y.). 330: 1787-97. PMID 21177974 DOI: 10.1126/Science.1198374  0.498
2010 Parisi MJ, Gupta V, Sturgill D, Warren JT, Jallon JM, Malone JH, Zhang Y, Gilbert LI, Oliver B. Germline-dependent gene expression in distant non-gonadal somatic tissues of Drosophila. Bmc Genomics. 11: 346. PMID 20515475 DOI: 10.1186/1471-2164-11-346  0.379
2008 Larracuente AM, Sackton TB, Greenberg AJ, Wong A, Singh ND, Sturgill D, Zhang Y, Oliver B, Clark AG. Evolution of protein-coding genes in Drosophila. Trends in Genetics : Tig. 24: 114-23. PMID 18249460 DOI: 10.1016/J.Tig.2007.12.001  0.399
2007 Sturgill D, Zhang Y, Parisi M, Oliver B. Demasculinization of X chromosomes in the Drosophila genus. Nature. 450: 238-41. PMID 17994090 DOI: 10.1038/Nature06330  0.375
2007 Zhang Y, Sturgill D, Parisi M, Kumar S, Oliver B. Constraint and turnover in sex-biased gene expression in the genus Drosophila. Nature. 450: 233-7. PMID 17994089 DOI: 10.1038/Nature06323  0.429
2007 Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, ... ... Sturgill D, et al. Evolution of genes and genomes on the Drosophila phylogeny. Nature. 450: 203-18. PMID 17994087 DOI: 10.1038/Nature06341  0.591
2007 Kalamegham R, Sturgill D, Siegfried E, Oliver B. Drosophila mojoless, a retroposed GSK-3, has functionally diverged to acquire an essential role in male fertility Molecular Biology and Evolution. 24: 732-742. PMID 17179138 DOI: 10.1093/Molbev/Msl201  0.387
2006 Cerrato A, Parisi M, Anna SS, Missirlis F, Guru S, Agarwal S, Sturgill D, Talbot T, Spiegel A, Collins F, Chandrasekharappa S, Marx S, Oliver B. Genetic interactions between Drosophila melanogaster menin and Jun/Fos Developmental Biology. 298: 59-70. PMID 16930585 DOI: 10.1016/J.Ydbio.2006.06.013  0.344
2006 FitzGerald PC, Sturgill D, Shyakhtenko A, Oliver B, Vinson C. Comparative genomics of Drosophila and human core promoters. Genome Biology. 7: R53. PMID 16827941 DOI: 10.1186/Gb-2006-7-7-R53  0.462
2006 Gupta V, Parisi M, Sturgill D, Nuttall R, Doctolero M, Dudko OK, Malley JD, Eastman PS, Oliver B. Global analysis of X-chromosome dosage compensation. Journal of Biology. 5: 3. PMID 16507155 DOI: 10.1186/Jbiol30  0.302
2006 Ratushna VG, Sturgill DM, Ramamoorthy S, Reichow SA, He Y, Lathigra R, Sriranganathan N, Halling SM, Boyle SM, Gibas CJ. Molecular targets for rapid identification of Brucella spp. Bmc Microbiology. 6: 13. PMID 16504063 DOI: 10.1186/1471-2180-6-13  0.449
2005 Bielinska B, Lü J, Sturgill D, Oliver B. Core promoter sequences contribute to ovo-B regulation in the Drosophila melanogaster germline. Genetics. 169: 161-72. PMID 15371353 DOI: 10.1534/Genetics.104.033118  0.398
Low-probability matches (unlikely to be authored by this person)
2019 Arango D, Sturgill D, Oberdoerffer S. Immunoprecipitation and Sequencing of Acetylated RNA. Bio-Protocol. 9: e3278. PMID 33654795 DOI: 10.21769/BioProtoc.3278  0.297
2022 Arango D, Sturgill D, Yang R, Kanai T, Bauer P, Roy J, Wang Z, Hosogane M, Schiffers S, Oberdoerffer S. Direct epitranscriptomic regulation of mammalian translation initiation through N4-acetylcytidine. Molecular Cell. PMID 35679869 DOI: 10.1016/j.molcel.2022.05.016  0.288
2024 Sturgill D, Wang L, Arda HE. PancrESS - a meta-analysis resource for understanding cell-type specific expression in the human pancreas. Bmc Genomics. 25: 76. PMID 38238687 DOI: 10.1186/s12864-024-09964-y  0.243
2022 Arunkumar G, Baek S, Sturgill D, Bui M, Dalal Y. Oncogenic lncRNAs alter epigenetic memory at a fragile chromosomal site in human cancer cells. Science Advances. 8: eabl5621. PMID 35235361 DOI: 10.1126/sciadv.abl5621  0.196
2022 Sturgill D, Arango D, Oberdoerffer S. Protocol for base resolution mapping of ac4C using RedaC:T-seq. Star Protocols. 3: 101858. PMID 36595942 DOI: 10.1016/j.xpro.2022.101858  0.154
2021 Bruno NE, Nwachukwu JC, Hughes DC, Srinivasan S, Hawkins R, Sturgill D, Hager GL, Hurst S, Sheu SS, Bodine SC, Conkright MD, Nettles KW. Activation of Crtc2/Creb1 in skeletal muscle enhances weight loss during intermittent fasting. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 35: e21999. PMID 34748223 DOI: 10.1096/fj.202100171R  0.151
2022 Arango D, Sturgill D, Yang R, Kanai T, Bauer P, Roy J, Wang Z, Hosogane M, Schiffers S, Oberdoerffer S. Direct epitranscriptomic regulation of mammalian translation initiation through N4-acetylcytidine. Molecular Cell. 82: 2912. PMID 35931039 DOI: 10.1016/j.molcel.2022.06.022  0.135
2021 Heard E, Johnson AD, Korbel JO, Lee C, Snyder MP, Sturgill D. The X chromosome from telomere to telomere: key achievements and future opportunities. Faculty Reviews. 10: 63. PMID 35088059 DOI: 10.12703/r-01-000001  0.127
2024 Beiki H, Sturgill D, Arango D, Relier S, Schiffers S, Oberdoerffer S. Detection of ac4C in human mRNA is preserved upon data reassessment. Molecular Cell. 84: 1611-1625.e3. PMID 38640896 DOI: 10.1016/j.molcel.2024.03.018  0.12
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