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Catherine K. Foo, Ph.D. - Publications

Affiliations: 
2011 Biochemistry and Molecular Biology University of California, San Francisco, San Francisco, CA 
Area:
Proteomics, Protein Folding, and Prion-Based Inheritance in Disease and Normal Biology
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9/28 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Westesson O, Nielsen R, John JS, Caulin A, Hahner N, Stewart S, Foo C, Lung K, Catalano J, Lee M, Giannikopoulos P, Polkinghorn W, Wiessman J, Regev A, Bivona T. Abstract 2173: Robust estimation of mutation burden Cancer Research. 75: 2173-2173. DOI: 10.1158/1538-7445.Am2015-2173  0.343
2014 Dunn JG, Foo CK, Belletier NG, Gavis ER, Weissman JS. Correction: Ribosome profiling reveals pervasive and regulated stop codon readthrough in Drosophila melanogaster Elife. 3. DOI: 10.7554/Elife.03178  0.436
2014 Foo CK, St. John JA, Westesson O, Hahner NJ, Caulin AF, Skinner ME, Catalano JP, Lung K, Parikh UG, Wellde AS, Barry JK, Wellde GW, Rosell R, Weissman JS, Polkinghorn WR, et al. Clinical validation of a comprehensive cancer genomics analysis for lung cancer patients. Journal of Clinical Oncology. 32: e22122-e22122. DOI: 10.1200/Jco.2014.32.15_Suppl.E22122  0.504
2014 Giannikopoulos P, John JS, Hahner N, Parker JS, Karachaliou N, Costa C, Westesson O, Parikh U, Foo CK, Cauhlin AF, Lozano MD, Viteri S, Perez-Gracia JL, Curioni A, Jantus-Lewintre E, et al. Abstract 954: Integrated genomic analysis by whole exome and transcriptome sequencing of tumor samples from EGFR-mutant non-small-cell lung cancer patients with acquired resistance to erlotinib Cancer Research. 74: 954-954. DOI: 10.1158/1538-7445.Am2014-954  0.484
2014 Foo CK, John JS, Hahner N, Westesson O, Skinner ME, Parikh U, Lung K, Cauhlin AF, Catalano JP, Wellde AS, Barry JK, Wellde GW, Ma P, Rosell R, Zorilla AFC, et al. Abstract 4707: Comprehensive integrated genomic analysis Cancer Research. 74: 4707-4707. DOI: 10.1158/1538-7445.Am2014-4707  0.526
2013 Dunn JG, Foo CK, Belletier NG, Gavis ER, Weissman JS. Ribosome profiling reveals pervasive and regulated stop codon readthrough in Drosophila melanogaster. Elife. 2: e01179. PMID 24302569 DOI: 10.7554/Elife.01179  0.484
2012 Rudin CM, Durinck S, Stawiski EW, Poirier JT, Modrusan Z, Shames DS, Bergbower EA, Guan Y, Shin J, Guillory J, Rivers CS, Foo CK, Bhatt D, Stinson J, Gnad F, et al. Comprehensive genomic analysis identifies SOX2 as a frequently amplified gene in small-cell lung cancer. Nature Genetics. 44: 1111-6. PMID 22941189 DOI: 10.1038/Ng.2405  0.307
2011 Voorhies M, Foo CK, Sil A. Experimental annotation of the human pathogen Histoplasma capsulatum transcribed regions using high-resolution tiling arrays. Bmc Microbiology. 11: 216. PMID 21958208 DOI: 10.1186/1471-2180-11-216  0.332
2011 Foo CK, Ohhashi Y, Kelly MJ, Tanaka M, Weissman JS. Radically different amyloid conformations dictate the seeding specificity of a chimeric Sup35 prion. Journal of Molecular Biology. 408: 1-8. PMID 21333653 DOI: 10.1016/J.Jmb.2011.02.025  0.385
Low-probability matches (unlikely to be authored by this person)
2005 Nittler MP, Hocking-Murray D, Foo CK, Sil A. Identification of Histoplasma capsulatum transcripts induced in response to reactive nitrogen species. Molecular Biology of the Cell. 16: 4792-813. PMID 16030248 DOI: 10.1091/Mbc.E05-05-0434  0.298
2015 Catalano J, Lung K, Patel M, Foo C, Giannikopoulos P, Cordero A. Validation Study for Automated Nucleic Acid Extraction From Frozen Tissue, Peripheral Blood, and Formalin-Fixed Paraffin-Embedded Tissue American Journal of Clinical Pathology. 144: A240-A240. DOI: 10.1093/Ajcp/144.Suppl2.240  0.246
2015 Catalano J, Patel M, Lung K, Giannikopoulos P, Foo C, Cordero A. The Automated Lab: Challenges, Triumphs, Pitfalls, and Considerations American Journal of Clinical Pathology. 144: A186-A186. DOI: 10.1093/Ajcp/144.Suppl2.186  0.203
2015 Catalano J, Giannikopoulos P, Foo C, Patel M, Lung K, Cordero A. Placing a Face to a Case: Investigating the Impact of Nonconventional Laboratory Practices on Staff Morale and Job Satisfaction American Journal of Clinical Pathology. 144: A187-A187. DOI: 10.1093/Ajcp/144.Suppl2.187  0.192
2005 Schaffner SF, Foo C, Gabriel S, Reich D, Daly MJ, Altshuler D. Calibrating a coalescent simulation of human genome sequence variation. Genome Research. 15: 1576-83. PMID 16251467 DOI: 10.1101/Gr.3709305  0.185
2012 Parikh C, Janakiraman V, Wu WI, Foo CK, Kljavin NM, Chaudhuri S, Stawiski E, Lee B, Lin J, Li H, Lorenzo MN, Yuan W, Guillory J, Jackson M, Rondon J, et al. Disruption of PH-kinase domain interactions leads to oncogenic activation of AKT in human cancers. Proceedings of the National Academy of Sciences of the United States of America. 109: 19368-73. PMID 23134728 DOI: 10.1073/Pnas.1204384109  0.159
2006 van Rij RP, Saleh MC, Berry B, Foo C, Houk A, Antoniewski C, Andino R. The RNA silencing endonuclease Argonaute 2 mediates specific antiviral immunity in Drosophila melanogaster. Genes & Development. 20: 2985-95. PMID 17079687 DOI: 10.1101/Gad.1482006  0.116
1997 Doorbar J, Foo C, Coleman N, Medcalf L, Hartley O, Prospero T, Napthine S, Sterling J, Winter G, Griffin H. Characterization of events during the late stages of HPV16 infection in vivo using high-affinity synthetic Fabs to E4. Virology. 238: 40-52. PMID 9375007 DOI: 10.1006/viro.1997.8768  0.073
1998 Vernon S, Foo CK, Plant ND. Urine sample collection. The British Journal of General Practice : the Journal of the Royal College of General Practitioners. 48: 1342-3. PMID 9747556  0.039
1987 Chowdhury AH, Foo CK. Analytical studies of building cladding Journal of Structural Engineering (United States). 113: 2097. DOI: 10.1061/(ASCE)0733-9445(1987)113:9(2097)  0.031
1997 Vernon S, Foo CK, Coulthard MG. How general practitioners manage children with urinary tract infection: an audit in the former Northern Region. The British Journal of General Practice : the Journal of the Royal College of General Practitioners. 47: 297-300. PMID 9219406  0.029
1989 Appleton RE, Foo CK. Dehydration fever in the neonate--a common phenomenon. Archives of Disease in Childhood. 64: 765-6. PMID 2730138 DOI: 10.1136/adc.64.5.765-a  0.02
1992 Foo CK, Fichter EF, Fichter BL. Workspace of beetle body as a function of foot position American Society of Mechanical Engineers, Design Engineering Division (Publication) De. 45: 567-572.  0.019
2008 Wai LC, Zhang X, Kripesh V, Premachandran CS, Chong SC, Liu YY, Madhukumar J, Srinivas VR, Thaw PP, Jong MJ, Lau JH, Wang S, Foo CK, Thew ML, Myo EPP, et al. Reliability results of 0.8 mil fine pitch copper wire bonding on immersion gold plated pad for copper low-k devices 10th Electronics Packaging Technology Conference, Eptc 2008. 957-964. DOI: 10.1109/EPTC.2008.4763553  0.017
2015 Foo CK, Leo CY, Aramesh R, Aroua MK, Aghamohammadi N, Shafeeyan MS, Shamiri A. Density and viscosity of aqueous mixtures of N-methyldiethanolamines (MDEA), piperazine (PZ) and ionic liquids Journal of Molecular Liquids. 209: 596-602. DOI: 10.1016/j.molliq.2015.05.041  0.017
2009 Yu DQ, Yan LL, Lee C, Choi WK, Thew S, Foo CK, Lau JH. Wafer-level hermetic bonding using Sn/In and Cu/Ti/Au metallization Ieee Transactions On Components and Packaging Technologies. 32: 926-934. DOI: 10.1109/TCAPT.2009.2016108  0.01
2008 Yu D, Yan L, Lee C, Choi WK, Thew ML, Foo CK, Lau JH. Wafer level hermetic bonding using Sn/In and Cu/Ti/Au metallization 10th Electronics Packaging Technology Conference, Eptc 2008. 767-772. DOI: 10.1109/EPTC.2008.4763525  0.01
1975 Alper H, Foo CK. Ortho metalation and donor ligand complexation reactions of O-alkyl thioesters with diiron enneacarbonyl Inorganic Chemistry. 14: 2928-2932.  0.01
1974 Foo CK, Sng E, Lam S. Source of Vibrio parahaemolyticus infection Singapore Medical Journal. 15: 188-190.  0.01
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