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Andrew E. Allen - Publications

Affiliations: 
Scripps Institution of Oceanography University of California, San Diego, La Jolla, CA 
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Year Citation  Score
2022 Kazamia E, Mach J, McQuaid JB, Gao X, Coale TH, Malych R, Camadro JM, Lesuisse E, Allen AE, Bowler C, Sutak R. In vivo localization of iron starvation induced proteins under variable iron supplementation regimes in . Plant Direct. 6: e472. PMID 36582220 DOI: 10.1002/pld3.472  0.468
2021 Oliver A, Podell S, Pinowska A, Traller JC, Smith SR, McClure R, Beliaev A, Bohutskyi P, Hill EA, Rabines A, Zheng H, Allen LZ, Kuo A, Grigoriev IV, Allen AE, et al. Diploid genomic architecture of Nitzschia inconspicua, an elite biomass production diatom. Scientific Reports. 11: 15592. PMID 34341414 DOI: 10.1038/s41598-021-95106-3  0.597
2020 Tan MH, Smith SR, Hixson KK, Tan J, McCarthy JK, Kustka AB, Allen AE. The Importance of Protein Phosphorylation for Signaling and Metabolism in Response to Diel Light Cycling and Nutrient Availability in a Marine Diatom. Biology. 9. PMID 32640597 DOI: 10.3390/Biology9070155  0.562
2020 Schulhof MA, Allen AE, Allen EE, Mladenov N, McCrow JP, Jones NT, Blanton J, Cavalheri HB, Kaul D, Symons CC, Shurin JB. Sierra Nevada mountain lake microbial communities are structured by temperature, resources and geographic location. Molecular Ecology. PMID 32578266 DOI: 10.1111/Mec.15469  0.313
2020 Jallet D, Xing D, Hughes A, Moosburner M, Simmons MP, Allen AE, Peers G. Mitochondrial fatty acid β-oxidation is required for storage lipid catabolism in a marine diatom. The New Phytologist. PMID 32535932 DOI: 10.1111/Nph.16744  0.327
2020 Wang H, Guo R, Lim WA, Allen AE, Ki JS. Comparative transcriptomics of toxin synthesis genes between the non-toxin producing dinoflagellate Cochlodinium polykrikoides and toxigenic Alexandrium pacificum. Harmful Algae. 93: 101777. PMID 32307068 DOI: 10.1016/J.Hal.2020.101777  0.354
2020 Faktorová D, Nisbet RER, Fernández Robledo JA, Casacuberta E, Sudek L, Allen AE, Ares M, Aresté C, Balestreri C, Barbrook AC, Beardslee P, Bender S, Booth DS, Bouget FY, Bowler C, et al. Publisher Correction: Genetic tool development in marine protists: emerging model organisms for experimental cell biology. Nature Methods. PMID 32296171 DOI: 10.1038/S41592-020-0828-6  0.511
2020 Faktorová D, Nisbet RER, Fernández Robledo JA, Casacuberta E, Sudek L, Allen AE, Ares M, Aresté C, Balestreri C, Barbrook AC, Beardslee P, Bender S, Booth DS, Bouget FY, Bowler C, et al. Genetic tool development in marine protists: emerging model organisms for experimental cell biology. Nature Methods. PMID 32251396 DOI: 10.1038/S41592-020-0796-X  0.555
2020 Moosburner MA, Gholami P, McCarthy JK, Tan M, Bielinski VA, Allen AE. Multiplexed Knockouts in the Model Diatom by Episomal Delivery of a Selectable Cas9. Frontiers in Microbiology. 11: 5. PMID 32047486 DOI: 10.3389/Fmicb.2020.00005  0.333
2019 Coale TH, Moosburner M, Horák A, Oborník M, Barbeau KA, Allen AE. Reduction-dependent siderophore assimilation in a model pennate diatom. Proceedings of the National Academy of Sciences of the United States of America. PMID 31685631 DOI: 10.1073/Pnas.1907234116  0.349
2019 Smith SR, Dupont CL, McCarthy JK, Broddrick JT, Oborník M, Horák A, Füssy Z, Cihlář J, Kleessen S, Zheng H, McCrow JP, Hixson KK, Araújo WL, Nunes-Nesi A, Fernie A, ... ... Allen AE, et al. Evolution and regulation of nitrogen flux through compartmentalized metabolic networks in a marine diatom. Nature Communications. 10: 4552. PMID 31591397 DOI: 10.1038/S41467-019-12407-Y  0.626
2019 Wu M, McCain JSP, Rowland E, Middag R, Sandgren M, Allen AE, Bertrand EM. Manganese and iron deficiency in Southern Ocean Phaeocystis antarctica populations revealed through taxon-specific protein indicators. Nature Communications. 10: 3582. PMID 31395884 DOI: 10.1038/S41467-019-11426-Z  0.34
2019 Kolody BC, McCrow JP, Allen LZ, Aylward FO, Fontanez KM, Moustafa A, Moniruzzaman M, Chavez FP, Scholin CA, Allen EE, Worden AZ, Delong EF, Allen AE. Diel transcriptional response of a California Current plankton microbiome to light, low iron, and enduring viral infection. The Isme Journal. PMID 31320727 DOI: 10.1038/S41396-019-0472-2  0.371
2019 Broddrick JT, Du N, Smith SR, Tsuji Y, Jallet D, Ware MA, Peers G, Matsuda Y, Dupont CL, Mitchell BG, Palsson BO, Allen AE. Cross-compartment metabolic coupling enables flexible photoprotective mechanisms in the diatom Phaeodactylum tricornutum. The New Phytologist. PMID 30636322 DOI: 10.1111/Nph.15685  0.587
2018 Hogle SL, Dupont CL, Hopkinson BM, King AL, Buck KN, Roe KL, Stuart RK, Allen AE, Mann EL, Johnson ZI, Barbeau KA. Pervasive iron limitation at subsurface chlorophyll maxima of the California Current. Proceedings of the National Academy of Sciences of the United States of America. PMID 30530699 DOI: 10.1073/Pnas.1813192115  0.33
2018 Brunson JK, McKinnie SMK, Chekan JR, McCrow JP, Miles ZD, Bertrand EM, Bielinski VA, Luhavaya H, Oborník M, Smith GJ, Hutchins DA, Allen AE, Moore BS. Biosynthesis of the neurotoxin domoic acid in a bloom-forming diatom. Science (New York, N.Y.). 361: 1356-1358. PMID 30262498 DOI: 10.1126/Science.Aau0382  0.356
2018 Murik O, Tirichine L, Prihoda J, Thomas Y, Araújo WL, Allen AE, Fernie AR, Bowler C. Downregulation of mitochondrial alternative oxidase affects chloroplast function, redox status and stress response in a marine diatom. The New Phytologist. PMID 30216452 DOI: 10.1111/Nph.15479  0.564
2018 Rastogi A, Maheswari U, Dorrell RG, Vieira FRJ, Maumus F, Kustka A, McCarthy J, Allen AE, Kersey P, Bowler C, Tirichine L. Integrative analysis of large scale transcriptome data draws a comprehensive landscape of Phaeodactylum tricornutum genome and evolutionary origin of diatoms. Scientific Reports. 8: 4834. PMID 29556065 DOI: 10.1038/S41598-018-23106-X  0.639
2018 McQuaid JB, Kustka AB, Oborník M, Horák A, McCrow JP, Karas BJ, Zheng H, Kindeberg T, Andersson AJ, Barbeau KA, Allen AE. Carbonate-sensitive phytotransferrin controls high-affinity iron uptake in diatoms. Nature. PMID 29539640 DOI: 10.1038/Nature25982  0.348
2018 Bender SJ, Moran DM, McIlvin MR, Zheng H, McCrow JP, Badger J, DiTullio GR, Allen AE, Saito MA. Iron triggers colony formation in Phaeocystis antarctica : connecting molecular mechanisms with iron biogeochemistry Biogeosciences Discussions. 1-52. DOI: 10.5194/Bg-2017-558  0.353
2018 Bender SJ, Moran DM, McIlvin MR, Zheng H, McCrow JP, Badger J, DiTullio GR, Allen AE, Saito MA. Colony formation in <i>Phaeocystis antarctica</i>: connecting molecular mechanisms with iron biogeochemistry Biogeosciences. 15: 4923-4942. DOI: 10.5194/Bg-15-4923-2018  0.356
2018 Berg C, Dupont CL, Asplund-Samuelsson J, Celepli NA, Eiler A, Allen AE, Ekman M, Bergman B, Ininbergs K. Dissection of Microbial Community Functions during a Cyanobacterial Bloom in the Baltic Sea via Metatranscriptomics Frontiers in Marine Science. 5. DOI: 10.3389/Fmars.2018.00055  0.383
2018 Spackeen J, Sipler R, Bertrand E, Xu K, McQuaid J, Walworth N, Hutchins D, Allen A, Bronk D. Impact of temperature, CO2, and iron on nutrient uptake by a late-season microbial community from the Ross Sea, Antarctica Aquatic Microbial Ecology. 82: 145-159. DOI: 10.3354/Ame01886  0.31
2018 Spackeen JL, Bronk DA, Sipler RE, Bertrand EM, Hutchins DA, Allen AE. Stoichiometric N:P Ratios, Temperature, and Iron Impact Carbon and Nitrogen Uptake by Ross Sea Microbial Communities Journal of Geophysical Research: Biogeosciences. 123: 2955-2975. DOI: 10.1029/2017Jg004316  0.315
2017 Hippmann AA, Schuback N, Moon KM, McCrow JP, Allen AE, Foster LJ, Green BR, Maldonado MT. Contrasting effects of copper limitation on the photosynthetic apparatus in two strains of the open ocean diatom Thalassiosira oceanica. Plos One. 12: e0181753. PMID 28837661 DOI: 10.1371/Journal.Pone.0181753  0.301
2017 McCarthy JK, Smith SR, McCrow JP, Tan M, Zheng H, Beeri K, Roth RA, Lichtle C, Goodenough U, Bowler C, Dupont CL, Allen AE. Nitrate Reductase Knockout Uncouples Nitrate Transport from Nitrate Assimilation and Drives Repartitioning of Carbon Flux in a Model Pennate Diatom. The Plant Cell. PMID 28765511 DOI: 10.1105/Tpc.16.00910  0.682
2017 Diner RE, Noddings CM, Lian NC, Kang AK, McQuaid JB, Jablanovic J, Espinoza JL, Nguyen NA, Anzelmatti MA, Jansson J, Bielinski VA, Karas BJ, Dupont CL, Allen AE, Weyman PD. Diatom centromeres suggest a mechanism for nuclear DNA acquisition. Proceedings of the National Academy of Sciences of the United States of America. PMID 28673987 DOI: 10.1073/Pnas.1700764114  0.355
2017 Lee ZM, Poret-Peterson AT, Siefert JL, Kaul D, Moustafa A, Allen AE, Dupont CL, Eguiarte LE, Souza V, Elser JJ. Nutrient Stoichiometry Shapes Microbial Community Structure in an Evaporitic Shallow Pond. Frontiers in Microbiology. 8: 949. PMID 28611750 DOI: 10.3389/Fmicb.2017.00949  0.337
2017 Smith SR, Gillard JT, Kustka AB, McCrow JP, Badger JH, Zheng H, New AM, Dupont CL, Obata T, Fernie AR, Allen AE. Correction: Transcriptional Orchestration of the Global Cellular Response of a Model Pennate Diatom to Diel Light Cycling under Iron Limitation. Plos Genetics. 13: e1006688. PMID 28355217 DOI: 10.1371/journal.pgen.1006688  0.497
2017 Mock T, Otillar RP, Strauss J, McMullan M, Paajanen P, Schmutz J, Salamov A, Sanges R, Toseland A, Ward BJ, Allen AE, Dupont CL, Frickenhaus S, Maumus F, Veluchamy A, et al. Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus. Nature. 1-5. PMID 28092920 DOI: 10.1038/Nature20803  0.61
2016 Smith SR, Gillard JT, Kustka AB, McCrow JP, Badger JH, Zheng H, New AM, Dupont CL, Obata T, Fernie AR, Allen AE. Transcriptional Orchestration of the Global Cellular Response of a Model Pennate Diatom to Diel Light Cycling under Iron Limitation. Plos Genetics. 12: e1006490. PMID 27973599 DOI: 10.1371/Journal.Pgen.1006490  0.588
2016 Traller JC, Cokus SJ, Lopez DA, Gaidarenko O, Smith SR, McCrow JP, Gallaher SD, Podell S, Thompson M, Cook O, Morselli M, Jaroszewicz A, Allen EE, Allen AE, Merchant SS, et al. Genome and methylome of the oleaginous diatom Cyclotella cryptica reveal genetic flexibility toward a high lipid phenotype. Biotechnology For Biofuels. 9: 258. PMID 27933100 DOI: 10.1186/S13068-016-0670-3  0.691
2016 Caron DA, Alexander H, Allen AE, Archibald JM, Armbrust EV, Bachy C, Bell CJ, Bharti A, Dyhrman ST, Guida SM, Heidelberg KB, Kaye JZ, Metzner J, Smith SR, Worden AZ. Probing the evolution, ecology and physiology of marine protists using transcriptomics. Nature Reviews. Microbiology. PMID 27867198 DOI: 10.1038/Nrmicro.2016.160  0.637
2016 Zielinski BL, Allen AE, Carpenter EJ, Coles VJ, Crump BC, Doherty M, Foster RA, Goes JI, Gomes HR, Hood RR, McCrow JP, Montoya JP, Moustafa A, Satinsky BM, Sharma S, et al. Patterns of Transcript Abundance of Eukaryotic Biogeochemically-Relevant Genes in the Amazon River Plume. Plos One. 11: e0160929. PMID 27598790 DOI: 10.1371/Journal.Pone.0160929  0.437
2016 Diner RE, Bielinski VA, Dupont CL, Allen AE, Weyman PD. Refinement of the Diatom Episome Maintenance Sequence and Improvement of Conjugation-Based DNA Delivery Methods. Frontiers in Bioengineering and Biotechnology. 4: 65. PMID 27551676 DOI: 10.3389/Fbioe.2016.00065  0.354
2016 Asplund-Samuelsson J, Sundh J, Dupont CL, Allen AE, McCrow JP, Celepli NA, Bergman B, Ininbergs K, Ekman M. Diversity and Expression of Bacterial Metacaspases in an Aquatic Ecosystem. Frontiers in Microbiology. 7: 1043. PMID 27458440 DOI: 10.3389/Fmicb.2016.01043  0.444
2016 Diner RE, Schwenck SM, McCrow JP, Zheng H, Allen AE. Genetic Manipulation of Competition for Nitrate between Heterotrophic Bacteria and Diatoms. Frontiers in Microbiology. 7: 880. PMID 27375600 DOI: 10.3389/Fmicb.2016.00880  0.359
2016 Díez B, Nylander JA, Ininbergs K, Dupont CL, Allen AE, Yooseph S, Rusch DB, Bergman B. Metagenomic Analysis of the Indian Ocean Picocyanobacterial Community: Structure, Potential Function and Evolution. Plos One. 11: e0155757. PMID 27196065 DOI: 10.1371/Journal.Pone.0155757  0.404
2016 Levering J, Broddrick J, Dupont CL, Peers G, Beeri K, Mayers J, Gallina AA, Allen AE, Palsson BO, Zengler K. Genome-Scale Model Reveals Metabolic Basis of Biomass Partitioning in a Model Diatom. Plos One. 11: e0155038. PMID 27152931 DOI: 10.1371/Journal.Pone.0155038  0.441
2016 Smith SR, Glé C, Abbriano RM, Traller JC, Davis A, Trentacoste E, Vernet M, Allen AE, Hildebrand M. Transcript level coordination of carbon pathways during silicon starvation-induced lipid accumulation in the diatom Thalassiosira pseudonana. The New Phytologist. PMID 26844818 DOI: 10.1111/Nph.13843  0.712
2016 Kharbush JJ, Allen AE, Moustafa A, Dorrestein PC, Aluwihare LI. Intact polar diacylglycerol biomarker lipids isolated from suspended particulate organic matter accumulating in an ultraoligotrophic water column Organic Geochemistry. 100: 29-41. DOI: 10.1016/J.Orggeochem.2016.07.008  0.332
2015 Bertrand EM, McCrow JP, Moustafa A, Zheng H, McQuaid JB, Delmont TO, Post AF, Sipler RE, Spackeen JL, Xu K, Bronk DA, Hutchins DA, Allen AE. Phytoplankton-bacterial interactions mediate micronutrient colimitation at the coastal Antarctic sea ice edge. Proceedings of the National Academy of Sciences of the United States of America. PMID 26221022 DOI: 10.1073/Pnas.1501615112  0.405
2015 Veluchamy A, Rastogi A, Lin X, Lombard B, Murik O, Thomas Y, Dingli F, Rivarola M, Ott S, Liu X, Sun Y, Rabinowicz PD, McCarthy J, Allen AE, Loew D, et al. An integrative analysis of post-translational histone modifications in the marine diatom Phaeodactylum tricornutum. Genome Biology. 16: 102. PMID 25990474 DOI: 10.1186/S13059-015-0671-8  0.568
2015 Karas BJ, Diner RE, Lefebvre SC, McQuaid J, Phillips AP, Noddings CM, Brunson JK, Valas RE, Deerinck TJ, Jablanovic J, Gillard JT, Beeri K, Ellisman MH, Glass JI, Hutchison CA, ... ... Allen AE, et al. Designer diatom episomes delivered by bacterial conjugation. Nature Communications. 6: 6925. PMID 25897682 DOI: 10.1038/Ncomms7925  0.39
2015 Morrissey J, Sutak R, Paz-Yepes J, Tanaka A, Moustafa A, Veluchamy A, Thomas Y, Botebol H, Bouget FY, McQuaid JB, Tirichine L, Allen AE, Lesuisse E, Bowler C. A novel protein, ubiquitous in marine phytoplankton, concentrates iron at the cell surface and facilitates uptake. Current Biology : Cb. 25: 364-71. PMID 25557662 DOI: 10.1016/J.Cub.2014.12.004  0.544
2015 Dupont CL, McCrow JP, Valas R, Moustafa A, Walworth N, Goodenough U, Roth R, Hogle SL, Bai J, Johnson ZI, Mann E, Palenik B, Barbeau KA, Venter JC, Allen AE. Genomes and gene expression across light and productivity gradients in eastern subtropical Pacific microbial communities. The Isme Journal. 9: 1076-92. PMID 25333462 DOI: 10.1038/Ismej.2014.198  0.407
2015 Weyman PD, Beeri K, Lefebvre SC, Rivera J, McCarthy JK, Heuberger AL, Peers G, Allen AE, Dupont CL. Inactivation of Phaeodactylum tricornutum urease gene using transcription activator-like effector nuclease-based targeted mutagenesis. Plant Biotechnology Journal. 13: 460-70. PMID 25302562 DOI: 10.1111/Pbi.12254  0.446
2015 Zheng H, Lefebvre SC, Smith SR, Hanly TJ, Suzuki Y, Allen AE. Successful diatom transcription factor synthesis and downstream cloning using the bioxpTM 3200 system Biotechniques. 59: 46-47. DOI: 10.2144/000114311  0.505
2014 Dupont CL, Larsson J, Yooseph S, Ininbergs K, Goll J, Asplund-Samuelsson J, McCrow JP, Celepli N, Allen LZ, Ekman M, Lucas AJ, Hagström Å, Thiagarajan M, Brindefalk B, Richter AR, ... ... Allen AE, et al. Functional tradeoffs underpin salinity-driven divergence in microbial community composition. Plos One. 9: e89549. PMID 24586863 DOI: 10.1371/Journal.Pone.0089549  0.382
2014 Veluchamy A, Lin X, Maumus F, Rivarola M, Bhavsar J, Creasy T, O'Brien K, Sengamalay NA, Tallon LJ, Smith AD, Rayko E, Ahmed I, Le Crom S, Farrant GK, Sgro JY, ... ... Allen AE, et al. Corrigendum: Insights into the role of DNA methylation in diatoms by genome-wide profiling in Phaeodactylum tricornutum Nature Communications. 5. DOI: 10.1038/Ncomms4028  0.541
2013 Allen AE, Allen LZ, McCrow JP. Lineage specific gene family enrichment at the microscale in marine systems. Current Opinion in Microbiology. 16: 605-17. PMID 24377115 DOI: 10.1016/J.Mib.2013.10.001  0.418
2013 Karas BJ, Molparia B, Jablanovic J, Hermann WJ, Lin YC, Dupont CL, Tagwerker C, Yonemoto IT, Noskov VN, Chuang RY, Allen AE, Glass JI, Hutchison CA, Smith HO, Venter JC, et al. Assembly of eukaryotic algal chromosomes in yeast. Journal of Biological Engineering. 7: 30. PMID 24325901 DOI: 10.1186/1754-1611-7-30  0.315
2013 Veluchamy A, Lin X, Maumus F, Rivarola M, Bhavsar J, Creasy T, O'Brien K, Sengamalay NA, Tallon LJ, Smith AD, Rayko E, Ahmed I, Le Crom S, Farrant GK, Sgro JY, ... ... Allen AE, ... ... Allen A, et al. Insights into the role of DNA methylation in diatoms by genome-wide profiling in Phaeodactylum tricornutum. Nature Communications. 4: 2091. PMID 23820484 DOI: 10.1038/Ncomms3091  0.558
2013 McLean JS, Lombardo MJ, Badger JH, Edlund A, Novotny M, Yee-Greenbaum J, Vyahhi N, Hall AP, Yang Y, Dupont CL, Ziegler MG, Chitsaz H, Allen AE, Yooseph S, Tesler G, et al. Candidate phylum TM6 genome recovered from a hospital sink biofilm provides genomic insights into this uncultivated phylum. Proceedings of the National Academy of Sciences of the United States of America. 110: E2390-9. PMID 23754396 DOI: 10.1073/Pnas.1219809110  0.439
2013 Smith MW, Zeigler Allen L, Allen AE, Herfort L, Simon HM. Contrasting genomic properties of free-living and particle-attached microbial assemblages within a coastal ecosystem. Frontiers in Microbiology. 4: 120. PMID 23750156 DOI: 10.3389/Fmicb.2013.00120  0.367
2013 Konotchick T, Dupont CL, Valas RE, Badger JH, Allen AE. Transcriptomic analysis of metabolic function in the giant kelp, Macrocystis pyrifera, across depth and season. The New Phytologist. 198: 398-407. PMID 23488966 DOI: 10.1111/Nph.12160  0.368
2012 Shrestha RP, Tesson B, Norden-Krichmar T, Federowicz S, Hildebrand M, Allen AE. Whole transcriptome analysis of the silicon response of the diatom Thalassiosira pseudonana. Bmc Genomics. 13: 499. PMID 22994549 DOI: 10.1186/1471-2164-13-499  0.588
2012 Brown MV, Lauro FM, DeMaere MZ, Muir L, Wilkins D, Thomas T, Riddle MJ, Fuhrman JA, Andrews-Pfannkoch C, Hoffman JM, McQuaid JB, Allen A, Rintoul SR, Cavicchioli R. Global biogeography of SAR11 marine bacteria. Molecular Systems Biology. 8: 595. PMID 22806143 DOI: 10.1038/Msb.2012.28  0.401
2012 Loper JE, Hassan KA, Mavrodi DV, Davis EW, Lim CK, Shaffer BT, Elbourne LD, Stockwell VO, Hartney SL, Breakwell K, Henkels MD, Tetu SG, Rangel LI, Kidarsa TA, Wilson NL, ... ... Allen AE, et al. Comparative genomics of plant-associated Pseudomonas spp.: insights into diversity and inheritance of traits involved in multitrophic interactions. Plos Genetics. 8: e1002784. PMID 22792073 DOI: 10.1371/Journal.Pgen.1002784  0.408
2012 Bertrand EM, Allen AE, Dupont CL, Norden-Krichmar TM, Bai J, Valas RE, Saito MA. Influence of cobalamin scarcity on diatom molecular physiology and identification of a cobalamin acquisition protein. Proceedings of the National Academy of Sciences of the United States of America. 109: E1762-71. PMID 22652568 DOI: 10.1073/Pnas.1201731109  0.404
2012 Fernie AR, Obata T, Allen AE, Araújo WL, Bowler C. Leveraging metabolomics for functional investigations in sequenced marine diatoms. Trends in Plant Science. 17: 395-403. PMID 22465020 DOI: 10.1016/J.Tplants.2012.02.005  0.623
2012 Marchetti A, Schruth DM, Durkin CA, Parker MS, Kodner RB, Berthiaume CT, Morales R, Allen AE, Armbrust EV. Comparative metatranscriptomics identifies molecular bases for the physiological responses of phytoplankton to varying iron availability. Proceedings of the National Academy of Sciences of the United States of America. 109: E317-25. PMID 22308424 DOI: 10.1073/Pnas.1118408109  0.362
2012 Zeigler Allen L, Allen EE, Badger JH, McCrow JP, Paulsen IT, Elbourne LD, Thiagarajan M, Rusch DB, Nealson KH, Williamson SJ, Venter JC, Allen AE. Influence of nutrients and currents on the genomic composition of microbes across an upwelling mosaic. The Isme Journal. 6: 1403-14. PMID 22278668 DOI: 10.1038/Ismej.2011.201  0.442
2012 Allen AE, Moustafa A, Montsant A, Eckert A, Kroth PG, Bowler C. Evolution and functional diversification of fructose bisphosphate aldolase genes in photosynthetic marine diatoms. Molecular Biology and Evolution. 29: 367-79. PMID 21903677 DOI: 10.1093/Molbev/Msr223  0.595
2012 Cock JM, Sterck L, Ahmed S, Allen AE, Amoutzias G, Anthouard V, Artiguenave F, Arun A, Aury JM, Badger JH, Beszteri B, Billiau K, Bonnet E, Bothwell JH, Bowler C, et al. The Ectocarpus Genome and Brown Algal Genomics. The Ectocarpus Genome Consortium. Advances in Botanical Research. 64: 141-184. DOI: 10.1016/B978-0-12-391499-6.00005-0  0.618
2011 Norden-Krichmar TM, Allen AE, Gaasterland T, Hildebrand M. Characterization of the small RNA transcriptome of the diatom, Thalassiosira pseudonana. Plos One. 6: e22870. PMID 21857960 DOI: 10.1371/Journal.Pone.0022870  0.576
2011 Worden AZ, Dupont C, Allen AE. Genomes of uncultured eukaryotes: sorting FACS from fiction. Genome Biology. 12: 117. PMID 21722350 DOI: 10.1186/Gb-2011-12-6-117  0.415
2011 Allen AE, Dupont CL, Oborník M, Horák A, Nunes-Nesi A, McCrow JP, Zheng H, Johnson DA, Hu H, Fernie AR, Bowler C. Evolution and metabolic significance of the urea cycle in photosynthetic diatoms. Nature. 473: 203-7. PMID 21562560 DOI: 10.1038/Nature10074  0.617
2011 Tachibana M, Allen AE, Kikutani S, Endo Y, Bowler C, Matsuda Y. Localization of putative carbonic anhydrases in two marine diatoms, Phaeodactylum tricornutum and Thalassiosira pseudonana. Photosynthesis Research. 109: 205-21. PMID 21365259 DOI: 10.1007/S11120-011-9634-4  0.487
2011 Hopkinson BM, Dupont CL, Allen AE, Morel FM. Efficiency of the CO2-concentrating mechanism of diatoms. Proceedings of the National Academy of Sciences of the United States of America. 108: 3830-7. PMID 21321195 DOI: 10.1073/Pnas.1018062108  0.308
2010 Bowler C, Vardi A, Allen AE. Oceanographic and biogeochemical insights from diatom genomes. Annual Review of Marine Science. 2: 333-65. PMID 21141668 DOI: 10.1146/Annurev-Marine-120308-081051  0.65
2010 Yooseph S, Nealson KH, Rusch DB, McCrow JP, Dupont CL, Kim M, Johnson J, Montgomery R, Ferriera S, Beeson K, Williamson SJ, Tovchigrechko A, Allen AE, Zeigler LA, Sutton G, et al. Genomic and functional adaptation in surface ocean planktonic prokaryotes. Nature. 468: 60-6. PMID 21048761 DOI: 10.1038/Nature09530  0.442
2010 Worden AZ, Allen AE. The voyage of the microbial eukaryote. Current Opinion in Microbiology. 13: 652-60. PMID 20832353 DOI: 10.1016/J.Mib.2010.08.001  0.482
2010 Maheswari U, Jabbari K, Petit JL, Porcel BM, Allen AE, Cadoret JP, De Martino A, Heijde M, Kaas R, La Roche J, Lopez PJ, Martin-Jézéquel V, Meichenin A, Mock T, Schnitzler Parker M, et al. Digital expression profiling of novel diatom transcripts provides insight into their biological functions. Genome Biology. 11: R85. PMID 20738856 DOI: 10.1186/Gb-2010-11-8-R85  0.612
2010 Cuvelier ML, Allen AE, Monier A, McCrow JP, Messié M, Tringe SG, Woyke T, Welsh RM, Ishoey T, Lee JH, Binder BJ, DuPont CL, Latasa M, Guigand C, Buck KR, et al. Targeted metagenomics and ecology of globally important uncultured eukaryotic phytoplankton. Proceedings of the National Academy of Sciences of the United States of America. 107: 14679-84. PMID 20668244 DOI: 10.1073/Pnas.1001665107  0.469
2010 Cock JM, Sterck L, Rouzé P, Scornet D, Allen AE, Amoutzias G, Anthouard V, Artiguenave F, Aury JM, Badger JH, Beszteri B, Billiau K, Bonnet E, Bothwell JH, Bowler C, et al. The Ectocarpus genome and the independent evolution of multicellularity in brown algae. Nature. 465: 617-21. PMID 20520714 DOI: 10.1038/Nature09016  0.631
2009 Maumus F, Allen AE, Mhiri C, Hu H, Jabbari K, Vardi A, Grandbastien MA, Bowler C. Potential impact of stress activated retrotransposons on genome evolution in a marine diatom. Bmc Genomics. 10: 624. PMID 20028555 DOI: 10.1186/1471-2164-10-624  0.609
2009 Worden AZ, Lee JH, Mock T, Rouzé P, Simmons MP, Aerts AL, Allen AE, Cuvelier ML, Derelle E, Everett MV, Foulon E, Grimwood J, Gundlach H, Henrissat B, Napoli C, et al. Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas. Science (New York, N.Y.). 324: 268-72. PMID 19359590 DOI: 10.1126/Science.1167222  0.457
2009 Poretsky RS, Hewson I, Sun S, Allen AE, Zehr JP, Moran MA. Comparative day/night metatranscriptomic analysis of microbial communities in the North Pacific subtropical gyre. Environmental Microbiology. 11: 1358-75. PMID 19207571 DOI: 10.1111/J.1462-2920.2008.01863.X  0.4
2008 Bowler C, Allen AE, Badger JH, Grimwood J, Jabbari K, Kuo A, Maheswari U, Martens C, Maumus F, Otillar RP, Rayko E, Salamov A, Vandepoele K, Beszteri B, Gruber A, et al. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Nature. 456: 239-44. PMID 18923393 DOI: 10.1038/Nature07410  0.639
2008 Allen AE, Laroche J, Maheswari U, Lommer M, Schauer N, Lopez PJ, Finazzi G, Fernie AR, Bowler C. Whole-cell response of the pennate diatom Phaeodactylum tricornutum to iron starvation. Proceedings of the National Academy of Sciences of the United States of America. 105: 10438-43. PMID 18653757 DOI: 10.1073/Pnas.0711370105  0.566
2007 Siaut M, Heijde M, Mangogna M, Montsant A, Coesel S, Allen A, Manfredonia A, Falciatore A, Bowler C. Molecular toolbox for studying diatom biology in Phaeodactylum tricornutum Gene. 406: 23-35. PMID 17658702 DOI: 10.1016/J.Gene.2007.05.022  0.595
2007 Kustka AB, Allen AE, Morel FMM. Sequence analysis and transcriptional regulation of iron acquisition genes in two marine diatoms Journal of Phycology. 43: 715-729. DOI: 10.1111/J.1529-8817.2007.00359.X  0.385
2007 Montsant A, Allen AE, Coesel S, Martino AD, Falciatore A, Mangogna M, Siaut M, Heijde M, Jabbari K, Maheswari U, Rayko E, Vardi A, Apt KE, Berges JA, Chiovitti A, et al. Identification and comparative genomic analysis of signaling and regulatory components in the diatom Thalassiosira pseudonana Journal of Phycology. 43: 585-604. DOI: 10.1111/J.1529-8817.2007.00342.X  0.65
2006 Allen AE, Vardi A, Bowler C. An ecological and evolutionary context for integrated nitrogen metabolism and related signaling pathways in marine diatoms. Current Opinion in Plant Biology. 9: 264-73. PMID 16603409 DOI: 10.1016/J.Pbi.2006.03.013  0.629
2005 Lopez PJ, Desclés J, Allen AE, Bowler C. Prospects in diatom research. Current Opinion in Biotechnology. 16: 180-6. PMID 15831384 DOI: 10.1016/J.Copbio.2005.02.002  0.622
2005 Allen AE, Booth MG, Verity PG, Frischer ME. Influence of nitrate availability on the distribution and abundance of heterotrophic bacterial nitrate assimilation genes in the Barents Sea during summer Aquatic Microbial Ecology. 39: 247-255. DOI: 10.3354/Ame039247  0.357
2005 Allen AE, Ward BB, Song B. Characterization of diatom (Bacillariophyceae) nitrate reductase genes and their detection in marine phytoplankton communities Journal of Phycology. 41: 95-104. DOI: 10.1111/J.1529-8817.2005.04090.X  0.37
2004 Armbrust EV, Berges JA, Bowler C, Green BR, Martinez D, Putnam NH, Zhou S, Allen AE, Apt KE, Bechner M, Brzezinski MA, Chaal BK, Chiovitti A, Davis AK, Demarest MS, et al. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Science (New York, N.Y.). 306: 79-86. PMID 15459382 DOI: 10.1126/Science.1101156  0.723
2002 Allen AE, Howard-Jones MH, Booth MG, Frischer ME, Verity PG, Bronk DA, Sanderson MP. Importance of heterotrophic bacterial assimilation of ammonium and nitrate in the Barents Sea during summer Journal of Marine Systems. 38: 93-108. DOI: 10.1016/S0924-7963(02)00171-9  0.315
2002 Howard-Jones MH, Ballard VD, Allen AE, Frischer ME, Verity PG. Distribution of bacterial biomass and activity in the marginal ice zone of the central Barents Sea during summer Journal of Marine Systems. 38: 77-91. DOI: 10.1016/S0924-7963(02)00170-7  0.316
2001 Allen AE, Booth MG, Frischer ME, Verity PG, Zehr JP, Zani S. Diversity and detection of nitrate assimilation genes in marine bacteria. Applied and Environmental Microbiology. 67: 5343-8. PMID 11679368 DOI: 10.1128/Aem.67.11.5343-5348.2001  0.38
Low-probability matches (unlikely to be authored by this person)
2017 Levering J, Dupont CL, Allen AE, Palsson BO, Zengler K. Integrated Regulatory and Metabolic Networks of the Marine Diatom Phaeodactylum tricornutum Predict the Response to Rising CO2 Levels. Msystems. 2. PMID 28217746 DOI: 10.1128/mSystems.00142-16  0.299
2012 Bertrand EM, Allen AE. Influence of vitamin B auxotrophy on nitrogen metabolism in eukaryotic phytoplankton. Frontiers in Microbiology. 3: 375. PMID 23091473 DOI: 10.3389/Fmicb.2012.00375  0.298
2006 Maldonado MT, Allen AE, Chong JS, Lin K, Leus D, Karpenko N, Harris SL. Copper‐dependent iron transport in coastal and oceanic diatoms Limnology and Oceanography. 51: 1729-1743. DOI: 10.4319/Lo.2006.51.4.1729  0.296
2005 Allen AE. Beyond sequence homology: Redundant ammonium transporters in a marine diatom are not functionally equivalent Journal of Phycology. 41: 4-6. DOI: 10.1111/J.0022-3646.2005.41101_2.X  0.296
2018 Du N, Gholami P, Kline DI, DuPont CL, Dickson AG, Mendola D, Martz T, Allen AE, Mitchell BG. Simultaneous quantum yield measurements of carbon uptake and oxygen evolution in microalgal cultures. Plos One. 13: e0199125. PMID 29920568 DOI: 10.1371/Journal.Pone.0199125  0.295
2015 Llewellyn CA, Sommer U, Dupont CL, Allen AE, Viant MR. Using community metabolomics as a new approach to discriminate marine microbial particulate organic matter in the western English Channel Progress in Oceanography. DOI: 10.1016/J.Pocean.2015.04.022  0.294
2019 Kranzler CF, Krause JW, Brzezinski MA, Edwards BR, Biggs WP, Maniscalco M, McCrow JP, Van Mooy BAS, Bidle KD, Allen AE, Thamatrakoln K. Silicon limitation facilitates virus infection and mortality of marine diatoms. Nature Microbiology. PMID 31308524 DOI: 10.1038/S41564-019-0502-X  0.292
2014 Smith DR, Arrigo KR, Alderkamp AC, Allen AE. Massive difference in synonymous substitution rates among mitochondrial, plastid, and nuclear genes of Phaeocystis algae. Molecular Phylogenetics and Evolution. 71: 36-40. PMID 24216019 DOI: 10.1016/J.Ympev.2013.10.018  0.29
2020 Horák A, Allen AE, Oborník M. Common origin of ornithine-urea cycle in opisthokonts and stramenopiles. Scientific Reports. 10: 16687. PMID 33028894 DOI: 10.1038/s41598-020-73715-8  0.283
2013 Noble AE, Moran DM, Allen AE, Saito MA. Dissolved and particulate trace metal micronutrients under the McMurdo Sound seasonal sea ice: basal sea ice communities as a capacitor for iron. Frontiers in Chemistry. 1: 25. PMID 24790953 DOI: 10.3389/Fchem.2013.00025  0.28
2017 Spackeen J, Sipler R, Xu K, Tatters A, Walworth N, Bertrand E, McQuaid J, Hutchins D, Allen A, Bronk D. Interactive effects of elevated temperature and CO2 on nitrate, urea, and dissolved inorganic carbon uptake by a coastal California, USA, microbial community Marine Ecology Progress Series. 577: 49-65. DOI: 10.3354/Meps12243  0.279
2021 Cohen NR, McIlvin MR, Moran DM, Held NA, Saunders JK, Hawco NJ, Brosnahan M, DiTullio GR, Lamborg C, McCrow JP, Dupont CL, Allen AE, Saito MA. Dinoflagellates alter their carbon and nutrient metabolic strategies across environmental gradients in the central Pacific Ocean. Nature Microbiology. PMID 33398100 DOI: 10.1038/s41564-020-00814-7  0.279
2013 Bertrand EM, Moran DM, McIlvin MR, Hoffman JM, Allen AE, Saito MA. Methionine synthase interreplacement in diatom cultures and communities: Implications for the persistence of B12 use by eukaryotic phytoplankton Limnology and Oceanography. 58: 1431-1450. DOI: 10.4319/Lo.2013.58.4.1431  0.27
2023 Brunson JK, Thukral M, Ryan JP, Anderson CR, Kolody BC, James C, Chavez FP, Leaw CP, Rabines AJ, Venepally P, Zheng H, Kudela RM, Smith GJ, Moore BS, Allen AE. Molecular Forecasting of Domoic Acid during a Pervasive Toxic Diatom Bloom. Biorxiv : the Preprint Server For Biology. PMID 37961417 DOI: 10.1101/2023.11.02.565333  0.269
2015 Paerl RW, Bertrand EM, Allen AE, Palenik B, Azam F. Vitamin B1 ecophysiology of marine picoeukaryotic algae: Strain-specific differences and a new role for bacteria in vitamin cycling Limnology and Oceanography. 60: 215-228. DOI: 10.1002/Lno.10009  0.267
2002 Verity PG, Wassmann P, Frischer ME, Howard-Jones MH, Allen AE. Grazing of phytoplankton by microzooplankton in the Barents Sea during early summer Journal of Marine Systems. 38: 109-123. DOI: 10.1016/S0924-7963(02)00172-0  0.265
2005 Allen AE. Defining the molecular basis for energy balance in marine diatoms under fluctuating environmental conditions Journal of Phycology. 41: 1073-1076. DOI: 10.1111/J.1529-8817.2005.00156.X  0.263
2021 Turnšek J, Brunson JK, Viedma MDPM, Deerinck TJ, Horák A, Oborník M, Bielinski VA, Allen AE. Proximity proteomics in a marine diatom reveals a putative cell surface-to-chloroplast iron trafficking pathway. Elife. 10. PMID 33591270 DOI: 10.7554/eLife.52770  0.249
2022 Steele TS, Brunson JK, Maeno Y, Terada R, Allen AE, Yotsu-Yamashita M, Chekan JR, Moore BS. Domoic acid biosynthesis in the red alga suggests a complex evolutionary history for toxin production. Proceedings of the National Academy of Sciences of the United States of America. 119. PMID 35110408 DOI: 10.1073/pnas.2117407119  0.247
2022 Hippmann AA, Schuback N, Moon KM, McCrow JP, Allen AE, Foster LF, Green BR, Maldonado MT. Proteomic analysis of metabolic pathways supports chloroplast-mitochondria cross-talk in a Cu-limited diatom. Plant Direct. 6: e376. PMID 35079683 DOI: 10.1002/pld3.376  0.246
2022 Hao X, Chen W, Amato A, Jouhet J, Maréchal E, Moog D, Hu H, Jin H, You L, Huang F, Moosburner M, Allen AE, Gong Y. Multiplexed CRISPR/Cas9 editing of the long-chain acyl-CoA synthetase family in the diatom Phaeodactylum tricornutum reveals that mitochondrial ptACSL3 is involved in the synthesis of storage lipids. The New Phytologist. 233: 1797-1812. PMID 34882804 DOI: 10.1111/nph.17911  0.235
2018 Tatters AO, Schnetzer A, Xu K, Walworth NG, Fu F, Spackeen JL, Sipler RE, Bertrand EM, McQuaid JB, Allen AE, Bronk DA, Gao K, Sun J, Caron DA, Hutchins DA. Interactive effects of temperature, CO2 and nitrogen source on a coastal California diatom assemblage Journal of Plankton Research. 40: 151-164. DOI: 10.1093/Plankt/Fbx074  0.235
2000 Harrison RM, Grenfell JL, Savage N, Allen A, Clemitshaw K, Penkett S, Hewitt CN, Davison B. Observations of new particle production in the atmosphere of a moderately polluted site in eastern England Journal of Geophysical Research. 105: 17819-17832. DOI: 10.1029/2000Jd900086  0.235
2013 Poplin E, Wasan H, Rolfe L, Raponi M, Ikdahl T, Bondarenko I, Davidenko I, Bondar V, Garin A, Boeck S, Ormanns S, Heinemann V, Bassi C, Evans TR, Andersson R, ... ... Allen A, et al. Randomized, multicenter, phase II study of CO-101 versus gemcitabine in patients with metastatic pancreatic ductal adenocarcinoma: including a prospective evaluation of the role of hENT1 in gemcitabine or CO-101 sensitivity. Journal of Clinical Oncology : Official Journal of the American Society of Clinical Oncology. 31: 4453-61. PMID 24220555 DOI: 10.1200/Jco.2013.51.0826  0.23
2021 Jabre LJ, Allen AE, McCain JSP, McCrow JP, Tenenbaum N, Spackeen JL, Sipler RE, Green BR, Bronk DA, Hutchins DA, Bertrand EM. Molecular underpinnings and biogeochemical consequences of enhanced diatom growth in a warming Southern Ocean. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34301906 DOI: 10.1073/pnas.2107238118  0.229
2017 Zeigler Allen L, McCrow JP, Ininbergs K, Dupont CL, Badger JH, Hoffman JM, Ekman M, Allen AE, Bergman B, Venter JC. The Baltic Sea Virome: Diversity and Transcriptional Activity of DNA and RNA Viruses. Msystems. 2. PMID 28217745 DOI: 10.1128/mSystems.00125-16  0.227
2019 Stephens BM, Wankel SD, Beman JM, Rabines AJ, Allen AE, Aluwihare LI. Euphotic zone nitrification in the California Current Ecosystem Limnology and Oceanography. 65: 790-806. DOI: 10.1002/Lno.11348  0.221
2020 Krause JW, Brzezinski MA, Largier JL, McNair HM, Maniscalco M, Bidle KD, Allen AE, Thamatrakoln K. The interaction of physical and biological factors drives phytoplankton spatial distribution in the northern California Current Limnology and Oceanography. DOI: 10.1002/Lno.11431  0.216
2022 James CC, Barton AD, Allen LZ, Lampe RH, Rabines A, Schulberg A, Zheng H, Goericke R, Goodwin KD, Allen AE. Influence of nutrient supply on plankton microbiome biodiversity and distribution in a coastal upwelling region. Nature Communications. 13: 2448. PMID 35508497 DOI: 10.1038/s41467-022-30139-4  0.212
2022 Koester I, Quinlan ZA, Nothias LF, White ME, Rabines A, Petras D, Brunson JK, Dührkop K, Ludwig M, Böcker S, Azam F, Allen AE, Dorrestein PC, Aluwihare LI. Illuminating the dark metabolome of Pseudo-nitzschia-microbiome associations. Environmental Microbiology. PMID 36222155 DOI: 10.1111/1462-2920.16242  0.21
2013 Walter AO, Sjin RT, Haringsma HJ, Ohashi K, Sun J, Lee K, Dubrovskiy A, Labenski M, Zhu Z, Wang Z, Sheets M, St Martin T, Karp R, van Kalken D, Chaturvedi P, ... ... Allen A, et al. Discovery of a mutant-selective covalent inhibitor of EGFR that overcomes T790M-mediated resistance in NSCLC. Cancer Discovery. 3: 1404-15. PMID 24065731 DOI: 10.1158/2159-8290.Cd-13-0314  0.21
1999 Wang Y, Allen A, Mark D, Harrison RM. Development of a personal monitoring method for nitrogen dioxide and sulfur dioxide with Sep-Pak C18 cartridge sampling and ion chromatographic determination Journal of Environmental Monitoring. 1: 423-426. PMID 11529158 DOI: 10.1039/A905305K  0.208
2023 Li X, Pura J, Allen A, Owzar K, Lu J, Harms M, Xie J. DYNATE: Localizing rare-variant association regions via multiple testing embedded in an aggregation tree. Genetic Epidemiology. PMID 38014869 DOI: 10.1002/gepi.22542  0.208
2024 Rao D, Füssy Z, Brisbin MM, McIlvin MR, Moran DM, Allen AE, Follows MJ, Saito MA. Flexible B ecophysiology of due to a fusion B-independent methionine synthase with widespread homologues. Proceedings of the National Academy of Sciences of the United States of America. 121: e2204075121. PMID 38306482 DOI: 10.1073/pnas.2204075121  0.204
2021 McCain JSP, Allen AE, Bertrand EM. Proteomic traits vary across taxa in a coastal Antarctic phytoplankton bloom. The Isme Journal. PMID 34482372 DOI: 10.1038/s41396-021-01084-9  0.204
2021 Diner RE, Kaul D, Rabines A, Zheng H, Steele JA, Griffith JF, Allen AE. Pathogenic Species Are Associated with Distinct Environmental Niches and Planktonic Taxa in Southern California (USA) Aquatic Microbiomes. Msystems. e0057121. PMID 34227831 DOI: 10.1128/mSystems.00571-21  0.201
2023 Kell RM, Subhas AV, Schanke NL, Lees LE, Chmiel RJ, Rao D, Brisbin MMM, Moran DM, McIlvin MR, Bolinesi F, Mangoni O, Casotti R, Balestra C, Horner T, Dunbar RB, ... Allen AE, et al. Zinc stimulation of coastal productivity in low carbon dioxide environments. Biorxiv : the Preprint Server For Biology. PMID 37961643 DOI: 10.1101/2023.11.05.565706  0.2
2014 Tjin Tham Sjin R, Lee K, Walter AO, Dubrovskiy A, Sheets M, Martin TS, Labenski MT, Zhu Z, Tester R, Karp R, Medikonda A, Chaturvedi P, Ren Y, Haringsma H, Etter J, ... ... Allen A, et al. In vitro and in vivo characterization of irreversible mutant-selective EGFR inhibitors that are wild-type sparing. Molecular Cancer Therapeutics. 13: 1468-79. PMID 24723450 DOI: 10.1158/1535-7163.Mct-13-0966  0.199
2022 Kellogg RM, Moosburner MA, Cohen NR, Hawco NJ, McIlvin MR, Moran DM, DiTullio GR, Subhas AV, Allen AE, Saito MA. Adaptive responses of marine diatoms to zinc scarcity and ecological implications. Nature Communications. 13: 1995. PMID 35422102 DOI: 10.1038/s41467-022-29603-y  0.196
2023 Lampe RH, Coale TH, Forsch KO, Jabre LJ, Kekuewa S, Bertrand EM, Horák A, Oborník M, Rabines AJ, Rowland E, Zheng H, Andersson AJ, Barbeau KA, Allen AE. Short-term acidification promotes diverse iron acquisition and conservation mechanisms in upwelling-associated phytoplankton. Nature Communications. 14: 7215. PMID 37940668 DOI: 10.1038/s41467-023-42949-1  0.196
2010 Black JC, Allen A, Van Rechem C, Forbes E, Longworth M, Tschöp K, Rinehart C, Quiton J, Walsh R, Smallwood A, Dyson NJ, Whetstine JR. Conserved antagonism between JMJD2A/KDM4A and HP1γ during cell cycle progression. Molecular Cell. 40: 736-48. PMID 21145482 DOI: 10.1016/J.Molcel.2010.11.008  0.193
2012 Johnson NV, Ahn SH, Deshmukh H, Levin MK, Nelson CL, Scott WK, Allen A, Fowler VG, Cowell LG. Haplotype Association Mapping Identifies a Candidate Gene Region in Mice Infected With Staphylococcus aureus. G3 (Bethesda, Md.). 2: 693-700. PMID 22690378 DOI: 10.1534/g3.112.002501  0.188
2020 Breier JA, Jakuba MV, Saito MA, Dick GJ, Grim SL, Chan EW, McIlvin MR, Moran DM, Alanis BA, Allen AE, Dupont CL, Johnson R. Revealing ocean-scale biochemical structure with a deep-diving vertical profiling autonomous vehicle. Science Robotics. 5. PMID 33239321 DOI: 10.1126/scirobotics.abc7104  0.187
2021 McCain JSP, Tagliabue A, Susko E, Achterberg EP, Allen AE, Bertrand EM. Cellular costs underpin micronutrient limitation in phytoplankton. Science Advances. 7. PMID 34362734 DOI: 10.1126/sciadv.abg6501  0.185
2021 Valencia B, Stukel MR, Allen AE, McCrow JP, Rabines A, Palenik B, Landry MR. Relating sinking and suspended microbial communities in the California Current Ecosystem: Digestion resistance and the contributions of phytoplankton taxa to export. Environmental Microbiology. PMID 34431195 DOI: 10.1111/1462-2920.15736  0.182
2013 Goldstein DB, Allen A, Keebler J, Margulies EH, Petrou S, Petrovski S, Sunyaev S. Sequencing studies in human genetics: design and interpretation. Nature Reviews. Genetics. 14: 460-70. PMID 23752795 DOI: 10.1038/Nrg3455  0.177
2023 Peña-Montenegro TD, Kleindienst S, Allen AE, Eren AM, McCrow JP, Sánchez-Calderón JD, Arnold J, Joye SB. Species-specific responses of marine bacteria to environmental perturbation. Isme Communications. 3: 99. PMID 37736763 DOI: 10.1038/s43705-023-00310-z  0.174
2019 Gelfman S, Dugger SA, Araujo Martins Moreno C, Ren Z, Wolock CJ, Shneider N, Phatnani H, Cirulli ET, Lasseigne BN, Harris T, Maniatis T, Rouleau G, Brown RH, Gitler AD, Myers RM, ... ... Allen A, et al. A new approach for rare variation collapsing on functional protein domains implicates specific genic regions in ALS. Genome Research. PMID 30940688 DOI: 10.1101/Gr.243592.118  0.173
2023 Diner RE, Zimmer-Faust A, Cooksey E, Allard S, Kodera SM, Kunselman E, Garodia Y, Verhougstraete MP, Allen AE, Griffith J, Gilbert JA. Host and Water Microbiota Are Differentially Linked to Potential Human Pathogen Accumulation in Oysters. Applied and Environmental Microbiology. e0031823. PMID 37318344 DOI: 10.1128/aem.00318-23  0.169
2007 Allen A. Epigenetic alterations and cancer: new targets for therapy. Idrugs : the Investigational Drugs Journal. 10: 709-12. PMID 17899489  0.168
2021 Schulte NO, Khan AL, Smith EW, Zoumplis A, Kaul D, Allen AE, Adams BJ, McKnight DM. Blowin' in the wind: Dispersal, structure, and metacommunity dynamics of aeolian diatoms in the McMurdo Sound region, Antarctica. Journal of Phycology. PMID 34817069 DOI: 10.1111/jpy.13223  0.158
2018 Sibley A, Li Z, Jiang Y, Li YJ, Chan C, Allen A, Owzar K. Facilitating the Calculation of the Efficient Score Using Symbolic Computing. The American Statistician. 72: 199-205. PMID 30122786 DOI: 10.1080/00031305.2017.1392361  0.15
2023 You L, Połońska A, Jasieniecka-Gazarkiewicz K, Richard F, Jouhet J, Maréchal E, Banaś A, Hu H, Pan Y, Hao X, Jin H, Allen AE, Amato A, Gong Y. Two plastidial lysophosphatidic acid acyltransferases differentially mediate the biosynthesis of membrane lipids and triacylglycerols in Phaeodactylum tricornutum. The New Phytologist. PMID 38031462 DOI: 10.1111/nph.19434  0.145
2023 Thukral M, Allen AE, Petras D. Progress and challenges in exploring aquatic microbial communities using non-targeted metabolomics. The Isme Journal. PMID 37857709 DOI: 10.1038/s41396-023-01532-8  0.14
2021 Liénard MA, Bernard GD, Allen A, Lassance JM, Song S, Childers RR, Yu N, Ye D, Stephenson A, Valencia-Montoya WA, Salzman S, Whitaker MRL, Calonje M, Zhang F, Pierce NE. The evolution of red color vision is linked to coordinated rhodopsin tuning in lycaenid butterflies. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33547236 DOI: 10.1073/pnas.2008986118  0.132
2006 Katz DA, Carr R, Grimm DR, Xiong H, Holley-Shanks R, Mueller T, Leake B, Wang Q, Han L, Wang PG, Edeki T, Sahelijo L, Doan T, Allen A, Spear BB, et al. Organic anion transporting polypeptide 1B1 activity classified by SLCO1B1 genotype influences atrasentan pharmacokinetics. Clinical Pharmacology and Therapeutics. 79: 186-96. PMID 16513443 DOI: 10.1016/j.clpt.2005.11.003  0.13
2023 Thukral M, Allen AE, Petras D. Publisher Correction: Progress and challenges in exploring aquatic microbial communities using non-targeted metabolomics. The Isme Journal. PMID 37993599 DOI: 10.1038/s41396-023-01552-4  0.129
2018 Lin J, Gresham J, Wang T, Kim SY, Alvarez J, Damrauer JS, Floyd S, Granek J, Allen A, Chan C, Xie J, Owzar K. bcSeq: An R Package for Fast Sequence Mapping in High-throughput shRNA and CRISPR Screens. Bioinformatics (Oxford, England). PMID 29790906 DOI: 10.1093/Bioinformatics/Bty402  0.128
2011 Van Rechem C, Black JC, Abbas T, Allen A, Rinehart CA, Yuan GC, Dutta A, Whetstine JR. The SKP1-Cul1-F-box and leucine-rich repeat protein 4 (SCF-FbxL4) ubiquitin ligase regulates lysine demethylase 4A (KDM4A)/Jumonji domain-containing 2A (JMJD2A) protein. The Journal of Biological Chemistry. 286: 30462-70. PMID 21757720 DOI: 10.1074/Jbc.M111.273508  0.123
2023 Damiris IK, Allen A. Exploring the Relationship between Early Adaptive Schemas and Sexual Satisfaction. International Journal of Sexual Health : Official Journal of the World Association For Sexual Health. 35: 13-29. PMID 38596764 DOI: 10.1080/19317611.2022.2155897  0.12
2021 Hall AP, Tepper JS, Boyle MH, Cary MG, Flandre TG, Piaia A, Tarnow I, Macri NP, Freke MC, Nikula KJ, Paul GR, Cauvin A, Gregori M, Haworth R, Naylor S, ... ... Allen A, et al. BSTP Review of 12 Case Studies Discussing the Challenges, Pathology, Immunogenicity, and Mechanisms of Inhaled Biologics. Toxicologic Pathology. 192623320976094. PMID 33455525 DOI: 10.1177/0192623320976094  0.119
2010 He M, Allen A. Testing gene-treatment interactions in pharmacogenetic studies. Journal of Biopharmaceutical Statistics. 20: 301-14. PMID 20309760 DOI: 10.1080/10543400903572761  0.116
2020 Brunklaus A, Du J, Steckler F, Ghanty II, Johannesen KM, Fenger CD, Schorge S, Baez-Nieto D, Wang HR, Allen A, Pan JQ, Lerche H, Heyne H, Symonds JD, Zuberi SM, et al. Biological concepts in human sodium channel epilepsies and their relevance in clinical practice. Epilepsia. PMID 32090326 DOI: 10.1111/Epi.16438  0.105
2020 Hwang H, Szucs MJ, Ding LJ, Allen A, Ren X, Haensgen H, Gao F, Rhim H, Andrade A, Pan JQ, Carr SA, Ahmad R, Xu W. Neurogranin, Encoded by the Schizophrenia Risk Gene NRGN, Bidirectionally Modulates Synaptic Plasticity via Calmodulin-Dependent Regulation of the Neuronal Phosphoproteome. Biological Psychiatry. PMID 33032807 DOI: 10.1016/j.biopsych.2020.07.014  0.103
2022 James CC, Barton AD, Allen LZ, Lampe RH, Rabines A, Schulberg A, Zheng H, Goericke R, Goodwin KD, Allen AE. Publisher Correction: Influence of nutrient supply on plankton microbiome biodiversity and distribution in a coastal upwelling region. Nature Communications. 13: 2887. PMID 35585093 DOI: 10.1038/s41467-022-30665-1  0.099
2014 Hicken EJ, Marmsater FP, Munson MC, Schlachter ST, Robinson JE, Allen S, Burgess LE, DeLisle RK, Rizzi JP, Topalov GT, Zhao Q, Hicks JM, Kallan NC, Tarlton E, Allen A, et al. Discovery of a Novel Class of Imidazo[1,2-a]Pyridines with Potent PDGFR Activity and Oral Bioavailability. Acs Medicinal Chemistry Letters. 5: 78-83. PMID 24900776 DOI: 10.1021/Ml4003953  0.096
2003 Dong C, Major LL, Allen A, Blankenfeldt W, Maskell D, Naismith JH. High-resolution structures of RmlC from Streptococcus suis in complex with substrate analogs locate the active site of this class of enzyme Structure. 11: 715-723. PMID 12791259 DOI: 10.1016/S0969-2126(03)00098-4  0.094
2022 Heaton A, Milligan E, Faulconer E, Allen A, Nguyen T, Weir SM, Glaberman S. Variation in copper sensitivity between laboratory and wild strains of Caenorhabditis elegans. Chemosphere. 287: 131883. PMID 34818820 DOI: 10.1016/j.chemosphere.2021.131883  0.092
2009 Baer BR, DeLisle RK, Allen A. Benzylic oxidation of gemfibrozil-1-O-β-glucuronide by P450 2C8 leads to heme alkylation and irreversible inhibition Chemical Research in Toxicology. 22: 1298-1309. PMID 19445523 DOI: 10.1021/tx900105n  0.091
2021 Baez-Nieto D, Allen A, Akers-Campbell S, Yang L, Budnik N, Pupo A, Shin YC, Genovese G, Liao M, Pérez-Palma E, Heyne H, Lal D, Lipscombe D, Pan JQ. Analysing an allelic series of rare missense variants of CACNA1I in a Swedish schizophrenia cohort. Brain : a Journal of Neurology. PMID 34919654 DOI: 10.1093/brain/awab443  0.087
2018 Pan JQ, Baez-Nieto D, Allen A, Wang HR, Cottrell JR. Developing High-Throughput Assays to Analyze and Screen Electrophysiological Phenotypes. Methods in Molecular Biology (Clifton, N.J.). 1787: 235-252. PMID 29736723 DOI: 10.1007/978-1-4939-7847-2_18  0.087
2015 Tsai DH, Lu YF, DelRio FW, Cho TJ, Guha S, Zachariah MR, Zhang F, Allen A, Hackley VA. Orthogonal analysis of functional gold nanoparticles for biomedical applications. Analytical and Bioanalytical Chemistry. PMID 26362156 DOI: 10.1007/S00216-015-9011-9  0.084
2017 Allen A, Kannis-Dymand L, Katsikitis M. Problematic internet pornography use: The role of craving, desire thinking, and metacognition. Addictive Behaviors. 70: 65-71. PMID 28214738 DOI: 10.1016/j.addbeh.2017.02.001  0.08
2010 Moustafa A, Bhattacharya D, Allen AE. iTree: A high-throughput phylogenomic pipeline 2010 5th Cairo International Biomedical Engineering Conference, Cibec 2010. 103-107. DOI: 10.1109/CIBEC.2010.5716071  0.078
2021 Raith L, Bignill J, Stavropoulos V, Millear P, Allen A, Stallman HM, Mason J, De Regt T, Wood A, Kannis-Dymand L. Massively Multiplayer Online Games and Well-Being: A Systematic Literature Review. Frontiers in Psychology. 12: 698799. PMID 34276523 DOI: 10.3389/fpsyg.2021.698799  0.078
2014 Kooyman RM, Wilf P, Barreda VD, Carpenter RJ, Jordan GJ, Sniderman JM, Allen A, Brodribb TJ, Crayn D, Feild TS, Laffan SW, Lusk CH, Rossetto M, Weston PH. Paleo-Antarctic rainforest into the modern Old World tropics: the rich past and threatened future of the "southern wet forest survivors". American Journal of Botany. 101: 2121-35. PMID 25480709 DOI: 10.3732/Ajb.1400340  0.078
2014 Ma L, Zhang F, Allen A, Levine L. Unveiling the origin of a nonequilibrium dynamic process detected by X-ray photon correlation spectroscopy via a finite element analysis approach. Acta Crystallographica. Section a, Foundations and Advances. 70: 338-47. PMID 25970190 DOI: 10.1107/S205327331400686X  0.074
2020 Ghoshal A, Uygun DS, Yang L, McNally JM, Lopez-Huerta VG, Arias-Garcia MA, Baez-Nieto D, Allen A, Fitzgerald M, Choi S, Zhang Q, Hope JM, Yan K, Mao X, Nicholson TB, et al. Effects of a patient-derived de novo coding alteration of CACNA1I in mice connect a schizophrenia risk gene with sleep spindle deficits. Translational Psychiatry. 10: 29. PMID 32066662 DOI: 10.1038/S41398-020-0685-1  0.073
2003 Rampersaud E, Allen A, Li YJ, Shao Y, Bass M, Haynes C, Ashley-Koch A, Martin ER, Schmidt S, Hauser ER. Adjusting for covariates on a slippery slope: linkage analysis of change over time. Bmc Genetics. 4: S50. PMID 14975118 DOI: 10.1186/1471-2156-4-S1-S50  0.071
2002 Badham NF, Mendelson WL, Allen A, Diederich AM, Eggleston DS, Filan JJ, Freyer AJ, Killmer LB, Kowalski CJ, Liu L, Novack VJ, Vogt FG, Webb KS, Yang J. Rearrangement of epoxynitriles: a convenient homologation of acyclic and cyclic ketones to carboxylic acids. The Journal of Organic Chemistry. 67: 5440-3. PMID 12126449 DOI: 10.1021/jo025737g  0.07
2002 McAllen R, Allen A, Malpas S. Sympathetic vasomotor tone - Time to move beyond the Network Oscillator Hypothesis? (multiple letters) American Journal of Physiology - Regulatory Integrative and Comparative Physiology. 283: R1285-R1287. PMID 12398062 DOI: 10.1152/Ajpregu.00297.2002  0.069
2022 Zhang YL, Moran SP, Allen A, Baez-Nieto D, Xu Q, Wang LA, Martenis WE, Sacher JR, Gale JP, Weïwer M, Wagner FF, Pan JQ. Novel Fluorescence-Based High-Throughput FLIPR Assay Utilizing Membrane-Tethered Genetic Calcium Sensors to Identify T-Type Calcium Channel Modulators. Acs Pharmacology & Translational Science. 5: 156-168. PMID 35311021 DOI: 10.1021/acsptsci.1c00233  0.069
2007 Eary CT, Jones ZS, Groneberg RD, Burgess LE, Mareska DA, Drew MD, Blake JF, Laird ER, Balachari D, O'Sullivan M, Allen A, Marsh V. Tetrazole and ester substituted tetrahydoquinoxalines as potent cholesteryl ester transfer protein inhibitors Bioorganic and Medicinal Chemistry Letters. 17: 2608-2613. PMID 17331716 DOI: 10.1016/j.bmcl.2007.01.112  0.066
2010 Allen A, Epstein MP, Satten GA. Score-based adjustment for confounding by population stratification in genetic association studies. Genetic Epidemiology. 34: 383-5. PMID 20127852 DOI: 10.1002/Gepi.20487  0.065
2019 Li Z, Lin J, Sibley AB, Truong T, Chua KC, Jiang Y, McCarthy J, Kroetz DL, Allen A, Owzar K. Efficient estimation of grouped survival models. Bmc Bioinformatics. 20: 269. PMID 31138120 DOI: 10.1186/S12859-019-2899-X  0.064
2004 Allen S, Newhouse B, Anderson AS, Fauber B, Allen A, Chantry D, Eberhardt C, Odingo J, Burgess LE. Discovery and SAR of trisubstituted thiazolidinones as CCR4 antagonists. Bioorganic & Medicinal Chemistry Letters. 14: 1619-24. PMID 15026036 DOI: 10.1016/j.bmcl.2004.01.072  0.064
2005 Bast RC, Lilja H, Urban N, Rimm DL, Fritsche H, Gray J, Veltri R, Klee G, Allen A, Kim N, Gutman S, Rubin MA, Hruszkewycz A. Translational crossroads for biomarkers Clinical Cancer Research. 11: 6103-6108. PMID 16144908 DOI: 10.1158/1078-0432.CCR-04-2213  0.061
2023 Allen A. 75 years of IUCr Journals: 1948 to 2023, an Editor-in-Chief's perspective. Iucrj. 10: 509-518. PMID 37668212 DOI: 10.1107/S205225252300670X  0.06
2022 Eckley D, Allen A, Millear P, Rune KT. COVID-19's impact on learning processes in Australian university students. Social Psychology of Education : An International Journal. 1-29. PMID 36415584 DOI: 10.1007/s11218-022-09739-x  0.06
2024 Allen UD, Barton M, Upton J, Bailey A, Campigotto A, Abdulnoor M, Julien JP, Gubbay J, Kissoon N, Litosh A, La Neve MR, Wong P, Allen A, Bailey R, Byrne W, et al. Disproportionate Rates of COVID-19 Among Black Canadian Communities: Lessons from a Cross-Sectional Study in the First Year of the Pandemic. Journal of Racial and Ethnic Health Disparities. PMID 38253978 DOI: 10.1007/s40615-023-01903-z  0.058
2022 Maher A, Cason L, Huckstepp T, Stallman H, Kannis-Dymand L, Millear P, Mason J, Wood A, Allen A. Early maladaptive schemas in eating disorders: A systematic review. European Eating Disorders Review : the Journal of the Eating Disorders Association. 30: 3-22. PMID 34636456 DOI: 10.1002/erv.2866  0.058
2023 Haber L, Allen A, Rune KT. Sexual quality of life following a cancer diagnosis: a qualitative study. Supportive Care in Cancer : Official Journal of the Multinational Association of Supportive Care in Cancer. 31: 125. PMID 36680658 DOI: 10.1007/s00520-022-07459-8  0.056
1980 Mugwira LM, Elgawhary SM, Allen AE. Nitrate Uptake Effectiveness of Different Cultivars of Triticale, Wheat, and Rye 1 Agronomy Journal. 72: 585-588. DOI: 10.2134/AGRONJ1980.00021962007200040003X  0.055
2021 Tully-Wilson C, Bojack R, Millear PM, Stallman HM, Allen A, Mason J. Self-perceptions of ageing: A systematic review of longitudinal studies. Psychology and Aging. PMID 34498894 DOI: 10.1037/pag0000638  0.055
2022 Palmer CD, Rappaport AR, Davis MJ, Hart MG, Scallan CD, Hong SJ, Gitlin L, Kraemer LD, Kounlavouth S, Yang A, Smith L, Schenk D, Skoberne M, Taquechel K, Marrali M, ... ... Allen A, et al. Individualized, heterologous chimpanzee adenovirus and self-amplifying mRNA neoantigen vaccine for advanced metastatic solid tumors: phase 1 trial interim results. Nature Medicine. PMID 35970920 DOI: 10.1038/s41591-022-01937-6  0.055
2024 Rappaport AR, Kyi C, Lane M, Hart MG, Johnson ML, Henick BS, Liao CY, Mahipal A, Shergill A, Spira AI, Goldman JW, Scallan CD, Schenk D, Palmer CD, Davis MJ, ... ... Allen A, et al. A shared neoantigen vaccine combined with immune checkpoint blockade for advanced metastatic solid tumors: phase 1 trial interim results. Nature Medicine. PMID 38538867 DOI: 10.1038/s41591-024-02851-9  0.055
2010 Zhang L, Connelly JJ, Peppel K, Brian L, Shah SH, Nelson S, Crosslin DR, Wang T, Allen A, Kraus WE, Gregory SG, Hauser ER, Freedman NJ. Aging-related atherosclerosis is exacerbated by arterial expression of tumor necrosis factor receptor-1: evidence from mouse models and human association studies. Human Molecular Genetics. 19: 2754-66. PMID 20421368 DOI: 10.1093/Hmg/Ddq172  0.053
2022 Bonner J, Allen A, Katsikitis M, Love S, Kannis-Dymand L. Metacognition, Desire Thinking and Craving in Problematic Video Game Use. Journal of Technology in Behavioral Science. 1-15. PMID 36034539 DOI: 10.1007/s41347-022-00272-4  0.053
2023 Bell C, Roberts GLR, Millear PM, Allen A, Wood AP, Kannis-Dymand L, Jona CM, Mason J. The emotionally exhausted treating the mentally unwell? A systematic review of burnout and stress interventions for psychologists. Clinical Psychology & Psychotherapy. PMID 37691443 DOI: 10.1002/cpp.2909  0.052
2017 Gadikota G, Zhang F, Allen A. Angstrom-to-Micrometer Characterization of the Structural and Microstructural Changes in Kaolinite on Heating using Ultra-Small-Angle, Small-Angle, and Wide-Angle X-ray Scattering (USAXS/SAXS/WAXS). Industrial & Engineering Chemistry Research. 56. PMID 31092971 DOI: 10.1021/acs.iecr.7b02810  0.052
2021 McCarron M, Allen A, McCausland D, Haigh M, Luus R, Bavussantakath FR, Sheerin F, Mulryan N, Burke E, McGlinchey E, Flannery F, McCallion P. The impact of COVID-19 on people ageing with an intellectual disability in Ireland: Protocol for a follow-up survey. Hrb Open Research. 4: 95. PMID 34622141 DOI: 10.12688/hrbopenres.13340.1  0.05
2003 Alexander TH, Ortiz GM, Wellons MF, Allen A, Grace EJ, Schweighardt B, Brancato J, Sandberg JK, Furlan SN, Miralles GD, Nixon DF, Bartlett JA. Changes in CD4+ T-cell differentiation phenotype during structured treatment interruption in patients with chronic HIV-1 infection. Journal of Acquired Immune Deficiency Syndromes (1999). 34: 475-81. PMID 14657757 DOI: 10.1097/00126334-200312150-00005  0.05
2013 Hooper SR, Curtiss K, Schoch K, Keshavan MS, Allen A, Shashi V. A longitudinal examination of the psychoeducational, neurocognitive, and psychiatric functioning in children with 22q11.2 deletion syndrome. Research in Developmental Disabilities. 34: 1758-69. PMID 23506790 DOI: 10.1016/J.Ridd.2012.12.003  0.049
2003 Kandzari DE, Labinaz M, Cantor WJ, Madan M, Gallup DS, Hasselblad V, Joseph D, Allen A, Green C, Hidinger KG, Krucoff MW, Christenson RH, Harrington RA, Tcheng JE. Reduction of myocardial ischemic injury following coronary intervention (the MC-1 to Eliminate Necrosis and Damage trial). The American Journal of Cardiology. 92: 660-4. PMID 12972102 DOI: 10.1016/S0002-9149(03)00818-X  0.049
2012 Frankel RM, Flanagan M, Ebright P, Bergman A, O'Brien CM, Franks Z, Allen A, Harris A, Saleem JJ. Context, culture and (non-verbal) communication affect handover quality. Bmj Quality & Safety. 21: i121-8. PMID 23173182 DOI: 10.1136/Bmjqs-2012-001482  0.049
2019 Lu C, Shi X, Allen A, Baez-Nieto D, Nikish A, Sanjana NE, Pan JQ. Overexpression of NEUROG2 and NEUROG1 in human embryonic stem cells produces a network of excitatory and inhibitory neurons. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. fj201801110RR. PMID 30698461 DOI: 10.1096/fj.201801110RR  0.048
2023 Allen A, Tully-Wilson C. Early Adaptive Schemas and Sexual Wellbeing in Women: Exploring Differences in Menopausal Status. International Journal of Applied Positive Psychology. 1-29. PMID 37361625 DOI: 10.1007/s41042-023-00100-x  0.046
2021 McCarron M, McCausland D, Luus R, Allen A, Sheerin F, Burke E, McGlinchy E, Flannery F, McCallion P. The impact of coronavirus disease 2019 (COVID-19) on older adults with an intellectual disability during the first wave of the pandemic in Ireland. Hrb Open Research. 4: 93. PMID 35112049 DOI: 10.12688/hrbopenres.13238.2  0.045
2012 Miller R, Estrada-Peña A, Almazán C, Allen A, Jory L, Yeater K, Messenger M, Ellis D, Pérez de León AA. Exploring the use of an anti-tick vaccine as a tool for the integrated eradication of the cattle fever tick, Rhipicephalus (Boophilus) annulatus. Vaccine. 30: 5682-7. PMID 22687762 DOI: 10.1016/J.Vaccine.2012.05.061  0.044
2013 Brandt JM, Gascoyne TC, Guenther LE, Allen A, Hedden DR, Turgeon TR, Bohm ER. Clinical failure analysis of contemporary ceramic-on-ceramic total hip replacements. Proceedings of the Institution of Mechanical Engineers. Part H, Journal of Engineering in Medicine. 227: 833-46. PMID 23736992 DOI: 10.1177/0954411913489803  0.043
2019 Stellari FF, Sala A, Ruscitti F, Buccellati C, Allen A, Risé P, Civelli M, Villetti G. CHF6001 Inhibits NF-κB Activation and Neutrophilic Recruitment in LPS-Induced Lung Inflammation in Mice. Frontiers in Pharmacology. 10: 1337. PMID 31798449 DOI: 10.3389/fphar.2019.01337  0.04
2011 DeVilbiss B, Ziegler J, Righter D, Allen A, Barrington G, Haldorson G. Diaphragmatic hernia in a two-year-old alpaca (Vicugna pacos). Journal of Zoo and Wildlife Medicine : Official Publication of the American Association of Zoo Veterinarians. 42: 513-7. PMID 22950329  0.04
2020 Lawless P, Lovell GP, Allen A, Kannis-Dymand L. Metacognitions in heterosexual, bisexual, and homosexual men: with or without premature ejaculation and erectile dysfunction. Behavioural and Cognitive Psychotherapy. 1-14. PMID 33334382 DOI: 10.1017/S1352465820000879  0.04
2022 Maher AL, Allen A, Mason J, Houlihan C, Wood AP, Huckstepp T. Exploring the Association Between Early Adaptive Schemas and Self-Reported Eating Disorder Symptomatology. Clinical Psychology & Psychotherapy. PMID 36203412 DOI: 10.1002/cpp.2789  0.039
2002 Cook HT, Khan SB, Allen A, Bhangal G, Smith J, Lobb RR, Pusey CD. Treatment with an antibody to VLA-1 integrin reduces glomerular and tubulointerstitial scarring in a rat model of crescentic glomerulonephritis. The American Journal of Pathology. 161: 1265-72. PMID 12368200 DOI: 10.1016/S0002-9440(10)64403-3  0.039
2023 Schultz K, Kannis-Dymand L, Jamieson D, McLoughlin LT, Loughnan S, Allen A, Hermens DF. Examining the Longitudinal Relationship Between Metacognitive Beliefs and Psychological Distress in an Adolescent Population: A Preliminary Analysis. Child Psychiatry and Human Development. PMID 37831288 DOI: 10.1007/s10578-023-01611-z  0.038
2019 Howard C, Powell AS, Pavlidis E, Pavel A, Finn D, Allen A, Olavarria-Ramirez L, Clarke G, Livingstone V, Boylan GB, Dempsey EM. No effect of a musical intervention on stress response to venepuncture in a neonatal population. Acta Paediatrica (Oslo, Norway : 1992). PMID 31532835 DOI: 10.1111/apa.15018  0.038
2002 Langston AA, Redei I, Caliendo AM, Somani J, Hutcherson D, Lonial S, Bucur S, Cherry J, Allen A, Waller EK. Development of drug-resistant herpes simplex virus infection after haploidentical hematopoietic progenitor cell transplantation. Blood. 99: 1085-8. PMID 11807018 DOI: 10.1182/blood.V99.3.1085  0.038
2002 Jermy MC, Allen A. Simulating the effects of multiple scattering on images of dense sprays and particle fields. Applied Optics. 41: 4188-96. PMID 12141519 DOI: 10.1364/ao.41.004188  0.038
2008 Carmalt JL, Allen A. The relationship between cheek tooth occlusal morphology, apparent digestibility, and ingesta particle size reduction in horses. Journal of the American Veterinary Medical Association. 233: 452-5. PMID 18673032 DOI: 10.2460/javma.233.3.452  0.037
2019 Hoyer D, Allen A, Jacobson LH. Hypnotics with novel modes of action. British Journal of Clinical Pharmacology. PMID 31756268 DOI: 10.1111/Bcp.14180  0.033
2023 Swaminathan AC, Barfield R, Zhang M, Povysil G, Chen C, Frankel C, Kelly F, McKinney M, Todd JL, Allen A, Palmer SM. Prevalence and significance of clonal hematopoiesis of indeterminate potential in lung transplant recipients. Bmc Pulmonary Medicine. 23: 414. PMID 37904125 DOI: 10.1186/s12890-023-02703-1  0.032
2021 Petras D, Phelan VV, Acharya D, Allen AE, Aron AT, Bandeira N, Bowen BP, Belle-Oudry D, Boecker S, Cummings DA, Deutsch JM, Fahy E, Garg N, Gregor R, Handelsman J, et al. GNPS Dashboard: collaborative exploration of mass spectrometry data in the web browser. Nature Methods. PMID 34862502 DOI: 10.1038/s41592-021-01339-5  0.03
2022 Allen A, Millear P, McKillop N, Katsikitis M. Sexual Fantasies and Harmful Sexual Interests: Exploring Differences in Sexual Memory Intensity and Sexual Fantasy Characteristics. International Journal of Offender Therapy and Comparative Criminology. 306624X221086580. PMID 35354408 DOI: 10.1177/0306624X221086580  0.029
2018 Allen L, Mulgrew KE, Rune K, Allen A. Attention bias for appearance words can be reduced in women: Results from a single-session attention bias modification task. Journal of Behavior Therapy and Experimental Psychiatry. 61: 97-103. PMID 29990684 DOI: 10.1016/j.jbtep.2018.06.012  0.025
2023 Huckstepp TJ, Allen A, Maher AL, Houlihan C, Mason J. Factor structure of the Young Positive Schema Questionnaire in an eating disorder sample. Eating and Weight Disorders : Ewd. 28: 13. PMID 36800100 DOI: 10.1007/s40519-023-01549-0  0.02
2013 Devilbiss B, Neelis D, Ochoa J, Ziegler J, Barrington G, Allen A. Computed tomography findings in a 5-year-old Australian Cashmere goat (Capra hircus) suffering leukoencephalomyelitis due to caprine arthritis encephalitis virus. The Canadian Veterinary Journal. La Revue Vã©Tã©Rinaire Canadienne. 54: 960-4. PMID 24155416  0.019
2023 Mihas AK, Prather JC, Alexander BK, Boateng IB, Moran TE, Turnbull LM, Allen A, Vise H, Kammire MS, Moreno AF, McGwin G, Chen AT, Talerico MT, Obremskey WT, Weiss DB, et al. The Use of Computed Tomography Angiography to Predict Complications in Tibia Fractures: A Multicenter Retrospective Analysis. Journal of Orthopaedic Trauma. PMID 37074790 DOI: 10.1097/BOT.0000000000002618  0.018
2022 Allen A, McKillop N, Katsikitis M, Millear P. The effects of bilateral stimulation using eye movements on sexual fantasies with follow-up. Journal of Behavior Therapy and Experimental Psychiatry. 79: 101826. PMID 36521200 DOI: 10.1016/j.jbtep.2022.101826  0.01
2023 Allen A, Katsikitis M, Millear P, McKillop N. Implications of sexual fantasy characteristics and memory intensity for harmful sexual behaviour. Criminal Behaviour and Mental Health : Cbmh. PMID 37658492 DOI: 10.1002/cbm.2308  0.01
2019 Mehta K, Al-Yabes O, Allen A, Williams A, Petrich A, Langlois V, Hébert D, Allen U. Burden of cytomegalovirus DNAemia among pediatric renal transplant patients on antiviral prophylaxis: A hospital-based analysis. Pediatric Transplantation. e13650. PMID 31891234 DOI: 10.1111/petr.13650  0.01
2017 George AJ, Allen A, Chand AL. Repurposing ARBs as treatments for breast cancer. Aging. PMID 28562314 DOI: 10.18632/aging.101249  0.01
2004 Browne G, Brown PA, Tomson CR, Fleming S, Allen A, Herriot R, Pusey CD, Rees AJ, Turner AN. Retransplantation in Alport post-transplant anti-GBM disease. Kidney International. 65: 675-81. PMID 14717941 DOI: 10.1111/j.1523-1755.2004.00428.x  0.01
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